RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SPACA7Q96KW9 195 aa7.63□□□□□ -1.19
SQLE-202ENST00000518604 OXCT2Q9BYC2 517 aaPredicted RBP7.63□□□□□ -1.19
SQLE-202ENST00000518604 UBE2OQ9C0C9 1292 aaKnown RBP7.63□□□□□ -1.19
SQLE-202ENST00000518604 LRRC4BQ9NT99 713 aa7.63□□□□□ -1.19
SQLE-202ENST00000518604 NLRP2Q9NX02 1062 aa7.63□□□□□ -1.19
SQLE-202ENST00000518604 DNAJB12Q9NXW2 375 aaKnown RBP7.63□□□□□ -1.19
SQLE-202ENST00000518604 KLF15Q9UIH9 416 aa7.63□□□□□ -1.19
SQLE-202ENST00000518604 INSM1Q01101 510 aaPredicted RBP7.62□□□□□ -1.19
SQLE-202ENST00000518604 XPCQ01831 940 aaPredicted RBP7.62□□□□□ -1.19
SQLE-202ENST00000518604 KIAA0319Q5VV43 1072 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 USPL1Q5W0Q7 1092 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 SLCO4C1Q6ZQN7 724 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 NCAPG2Q86XI2 1143 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 CNTNAP3BQ96NU0 1288 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 MDFIQ99750 246 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 DUSP9Q99956 384 aaKnown RBP7.62□□□□□ -1.19
SQLE-202ENST00000518604 CNTNAP3Q9BZ76 1288 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 WWC3Q9ULE0 1092 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 SPG7Q9UQ90 795 aa7.62□□□□□ -1.19
SQLE-202ENST00000518604 ELOA3CA0A087WX78 387 aaPredicted RBP7.61□□□□□ -1.19
SQLE-202ENST00000518604 ELOA3DA6NLF2 546 aaPredicted RBP7.61□□□□□ -1.19
SQLE-202ENST00000518604 NEURL1BA8MQ27 555 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 ZBTB42B2RXF5 422 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 ADAMTS2O95450 1211 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 SLURP2P0DP57 97 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 ALAS2P22557 587 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 GNA15P30679 374 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 KRT76Q01546 638 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 ELOA3BQ3SY89 546 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 CEP120Q8N960 986 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 ELOA3Q8NG57 546 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 RBSNQ9H1K0 784 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 PARP2Q9UGN5 583 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 GGA1Q9UJY5 639 aa7.61□□□□□ -1.19
SQLE-202ENST00000518604 VAMP1P23763 118 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 ADH7P40394 386 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 DAB2P98082 770 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 TAGLNQ01995 201 aaKnown RBP7.6□□□□□ -1.19
SQLE-202ENST00000518604 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.6□□□□□ -1.19
SQLE-202ENST00000518604 TMC4Q7Z404 712 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 FCHSD1Q86WN1 690 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 SRCIN1Q9C0H9 1055 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 IGFLR1Q9H665 355 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 PPP4R2Q9NY27 417 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 KANSL3Q9P2N6 904 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 SLC6A14Q9UN76 642 aa7.6□□□□□ -1.19
SQLE-202ENST00000518604 GHRHP01286 108 aa7.59□□□□□ -1.19
SQLE-202ENST00000518604 POLR3DP05423 398 aaPredicted RBP7.59□□□□□ -1.19
SQLE-202ENST00000518604 GMPRP36959 345 aa7.59□□□□□ -1.19
SQLE-202ENST00000518604 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
SQLE-202ENST00000518604 COL13A1Q5TAT6 717 aaPredicted RBP7.59□□□□□ -1.19
SQLE-202ENST00000518604 EPS8L3Q8TE67 593 aaKnown RBP7.59□□□□□ -1.19
SQLE-202ENST00000518604 ACDQ96AP0 544 aa7.59□□□□□ -1.19
SQLE-202ENST00000518604 NSUN5Q96P11 429 aaKnown RBP7.59□□□□□ -1.19
SQLE-202ENST00000518604 SUV39H2Q9H5I1 410 aa7.59□□□□□ -1.19
SQLE-202ENST00000518604 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
SQLE-202ENST00000518604 FRRS1LQ9P0K9 344 aa7.59□□□□□ -1.19
SQLE-202ENST00000518604 TRAK1Q9UPV9 953 aa7.59□□□□□ -1.19
SQLE-202ENST00000518604 A0A1W2PP55 124 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 EPXP11678 715 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 PSMD2Q13200 908 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 PEAR1Q5VY43 1037 aaPredicted RBP7.58□□□□□ -1.2
SQLE-202ENST00000518604 NPM2Q86SE8 214 aaKnown RBP7.58□□□□□ -1.2
SQLE-202ENST00000518604 FAM35AQ86V20 835 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 TTC9Q92623 222 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 DZANK1Q9NVP4 752 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 AK5Q9Y6K8 562 aa7.58□□□□□ -1.2
SQLE-202ENST00000518604 E9PSI1 815 aa7.57□□□□□ -1.2
SQLE-202ENST00000518604 SORBS3O60504 671 aa7.57□□□□□ -1.2
SQLE-202ENST00000518604 GADD45BO75293 160 aaPredicted RBP7.57□□□□□ -1.2
SQLE-202ENST00000518604 KANK3Q6NY19 840 aa7.57□□□□□ -1.2
SQLE-202ENST00000518604 OSMRQ99650 979 aa7.57□□□□□ -1.2
SQLE-202ENST00000518604 PBX4Q9BYU1 374 aa7.57□□□□□ -1.2
SQLE-202ENST00000518604 MRS2Q9HD23 443 aa7.57□□□□□ -1.2
SQLE-202ENST00000518604 J3QW42 95 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 OIP5O43482 229 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 BCRP11274 1271 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 MLLT1Q03111 559 aaPredicted RBP7.56□□□□□ -1.2
SQLE-202ENST00000518604 ELMSAN1Q6PJG2 1045 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 CACTIN-AS1Q8N1I8 211 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 TMEM102Q8N9M5 508 aaPredicted RBP7.56□□□□□ -1.2
SQLE-202ENST00000518604 EDARADDQ8WWZ3 215 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 MRRFQ96E11 262 aaKnown RBP7.56□□□□□ -1.2
SQLE-202ENST00000518604 EHD4Q9H223 541 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 ZFYVE1Q9HBF4 777 aa7.56□□□□□ -1.2
SQLE-202ENST00000518604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.56□□□□□ -1.2
SQLE-202ENST00000518604 UNCXA6NJT0 531 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 NFKBIEO00221 500 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 SMNDC1O75940 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
SQLE-202ENST00000518604 XRCC5P13010 732 aaKnown RBP7.55□□□□□ -1.2
SQLE-202ENST00000518604 CPB1P15086 417 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 EIF2AK2P19525 551 aaKnown RBP7.55□□□□□ -1.2
SQLE-202ENST00000518604 EIF4BP23588 611 aaKnown RBP7.55□□□□□ -1.2
SQLE-202ENST00000518604 IRS1P35568 1242 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 MRPL58Q14197 206 aaKnown RBP7.55□□□□□ -1.2
SQLE-202ENST00000518604 PRPF40BQ6NWY9 871 aaKnown RBP7.55□□□□□ -1.2
SQLE-202ENST00000518604 HFE2Q6ZVN8 426 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 CCNJLQ8IV13 435 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms