RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, human

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-204	ENST00000517525	ANKIB1	Q9P2G1	1089 aa		31.21	■■■□□ 2.59
PVT1-204	ENST00000517525	UTY	O14607	1347 aa		31.21	■■■□□ 2.59
PVT1-204	ENST00000517525	YDJC	A8MPS7	323 aa		31.2	■■■□□ 2.59
PVT1-204	ENST00000517525	ITGA6	P23229	1130 aa		31.2	■■■□□ 2.59
PVT1-204	ENST00000517525	MINPP1	Q9UNW1	487 aa		31.2	■■■□□ 2.59
PVT1-204	ENST00000517525	POTEI	P0CG38	1075 aa		31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	POTEJ	P0CG39	1038 aa		31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	ATP2B4	P23634	1241 aa		31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	LMOD1	P29536	600 aa	Predicted RBP	31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	FAM161A	Q3B820	660 aa		31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	SLC4A10	Q6U841	1118 aa		31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	ZC3H12C	Q9C0D7	883 aa	Known RBP	31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	C9orf78	Q9NZ63	289 aa	Predicted RBP	31.19	■■■□□ 2.58
PVT1-204	ENST00000517525	UFL1	O94874	794 aa		31.18	■■■□□ 2.58
PVT1-204	ENST00000517525	IGHMBP2	P38935	993 aa	Known RBP	31.18	■■■□□ 2.58
PVT1-204	ENST00000517525	SMC4	Q9NTJ3	1288 aa		31.16	■■■□□ 2.58
PVT1-204	ENST00000517525	GPRC5D	Q9NZD1	345 aa		31.16	■■■□□ 2.58
PVT1-204	ENST00000517525	ANKRD18B	A2A2Z9	1011 aa		31.15	■■■□□ 2.58
PVT1-204	ENST00000517525	RIMBP2	O15034	1052 aa		31.15	■■■□□ 2.58
PVT1-204	ENST00000517525	ADAMTSL1	Q8N6G6	1762 aa		31.15	■■■□□ 2.58
PVT1-204	ENST00000517525	RAD17	O75943	681 aa		31.14	■■■□□ 2.58
PVT1-204	ENST00000517525	EPS15	P42566	896 aa		31.14	■■■□□ 2.58
PVT1-204	ENST00000517525	EPHA10	Q5JZY3	1008 aa		31.14	■■■□□ 2.58
PVT1-204	ENST00000517525	USP50	Q70EL3	339 aa	Predicted RBP	31.14	■■■□□ 2.58
PVT1-204	ENST00000517525	DNAJC5G	Q8N7S2	189 aa		31.14	■■■□□ 2.58
PVT1-204	ENST00000517525	ECE2	O60344	883 aa		31.13	■■■□□ 2.57
PVT1-204	ENST00000517525	IFIT5	Q13325	482 aa	Known RBP	31.13	■■■□□ 2.57
PVT1-204	ENST00000517525	MPHOSPH8	Q99549	860 aa		31.13	■■■□□ 2.57
PVT1-204	ENST00000517525	BCL2L13	Q9BXK5	485 aa		31.13	■■■□□ 2.57
PVT1-204	ENST00000517525	ANKRD2	Q9GZV1	360 aa		31.13	■■■□□ 2.57
PVT1-204	ENST00000517525	DBNDD1	Q9H9R9	158 aa		31.13	■■■□□ 2.57
PVT1-204	ENST00000517525	LEMD3	Q9Y2U8	911 aa		31.13	■■■□□ 2.57
PVT1-204	ENST00000517525	GMPS	P49915	693 aa	Predicted RBP	31.12	■■■□□ 2.57
PVT1-204	ENST00000517525	EAPP	Q56P03	285 aa	Predicted RBP	31.12	■■■□□ 2.57
PVT1-204	ENST00000517525	LMBR1L	Q6UX01	489 aa		31.12	■■■□□ 2.57
PVT1-204	ENST00000517525	DPF2	Q92785	391 aa		31.12	■■■□□ 2.57
PVT1-204	ENST00000517525	GPR101	Q96P66	508 aa	Predicted RBP	31.12	■■■□□ 2.57
PVT1-204	ENST00000517525	ITGBL1	O95965	494 aa	Predicted RBP	31.11	■■■□□ 2.57
PVT1-204	ENST00000517525	CCT4	P50991	539 aa	Known RBP	31.11	■■■□□ 2.57
PVT1-204	ENST00000517525	RARS	P54136	660 aa	Known RBP	31.11	■■■□□ 2.57
PVT1-204	ENST00000517525	KAZALD1	Q96I82	304 aa		31.11	■■■□□ 2.57
PVT1-204	ENST00000517525	ADARB2	Q9NS39	739 aa	Known RBP	31.11	■■■□□ 2.57
PVT1-204	ENST00000517525	MED23	Q9ULK4	1368 aa		31.1	■■■□□ 2.57
PVT1-204	ENST00000517525	PASK	Q96RG2	1323 aa		31.1	■■■□□ 2.57
PVT1-204	ENST00000517525	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.1	■■■□□ 2.57
PVT1-204	ENST00000517525	DOK7	Q18PE1	504 aa		31.1	■■■□□ 2.57
PVT1-204	ENST00000517525	RPS12	P25398	132 aa	Known RBP	31.09	■■■□□ 2.57
PVT1-204	ENST00000517525	PSMD14	O00487	310 aa		31.08	■■■□□ 2.57
PVT1-204	ENST00000517525	PODN	Q7Z5L7	613 aa		31.08	■■■□□ 2.57
PVT1-204	ENST00000517525	SUCLG2	Q96I99	432 aa		31.08	■■■□□ 2.57
PVT1-204	ENST00000517525	ZNF609	O15014	1411 aa		31.07	■■■□□ 2.57
PVT1-204	ENST00000517525	VIL1	P09327	827 aa	Known RBP	31.07	■■■□□ 2.56
PVT1-204	ENST00000517525	CCDC57	Q2TAC2	916 aa		31.07	■■■□□ 2.56
PVT1-204	ENST00000517525	RABL6	Q3YEC7	729 aa	Predicted RBP	31.07	■■■□□ 2.56
PVT1-204	ENST00000517525	ARHGAP45	Q92619	1136 aa		31.07	■■■□□ 2.56
PVT1-204	ENST00000517525	USP44	Q9H0E7	712 aa		31.07	■■■□□ 2.56
PVT1-204	ENST00000517525	CLEC11A	Q9Y240	323 aa		31.07	■■■□□ 2.56
PVT1-204	ENST00000517525	HNRNPU	Q00839	825 aa	Known RBP eCLIP	31.06	■■■□□ 2.56	1e-6	■■■■□ 21.2
PVT1-204	ENST00000517525	API5	Q9BZZ5	524 aa	Known RBP	31.06	■■■□□ 2.56
PVT1-204	ENST00000517525	KCNQ5	Q9NR82	932 aa		31.06	■■■□□ 2.56
PVT1-204	ENST00000517525	NOB1	Q9ULX3	412 aa	Known RBP	31.06	■■■□□ 2.56
PVT1-204	ENST00000517525	CHRND	Q07001	517 aa		31.05	■■■□□ 2.56
PVT1-204	ENST00000517525	CNTROB	Q8N137	903 aa		31.05	■■■□□ 2.56
PVT1-204	ENST00000517525	PGAP2	Q9UHJ9	254 aa		31.05	■■■□□ 2.56
PVT1-204	ENST00000517525	CNOT7	Q9UIV1	285 aa	Known RBP	31.05	■■■□□ 2.56
PVT1-204	ENST00000517525	ZNF804B	A4D1E1	1349 aa		31.04	■■■□□ 2.56
PVT1-204	ENST00000517525	WTIP	A6NIX2	430 aa	Predicted RBP	31.04	■■■□□ 2.56
PVT1-204	ENST00000517525		G3V3G9	751 aa		31.04	■■■□□ 2.56
PVT1-204	ENST00000517525	DCAF8	Q5TAQ9	597 aa		31.04	■■■□□ 2.56
PVT1-204	ENST00000517525	CHMP3	Q9Y3E7	222 aa		31.04	■■■□□ 2.56
PVT1-204	ENST00000517525	C15orf52	Q6ZUT6	534 aa	Known RBP	31.03	■■■□□ 2.56
PVT1-204	ENST00000517525	ZC3H15	Q8WU90	426 aa	Known RBP	31.03	■■■□□ 2.56
PVT1-204	ENST00000517525	KIF16B	Q96L93	1317 aa		31.02	■■■□□ 2.56
PVT1-204	ENST00000517525		H7C1D1	291 aa		31.02	■■■□□ 2.56
PVT1-204	ENST00000517525	IFFO2	Q5TF58	517 aa		31.02	■■■□□ 2.56
PVT1-204	ENST00000517525	COA1	Q9GZY4	146 aa		31.02	■■■□□ 2.56
PVT1-204	ENST00000517525	CREBZF	Q9NS37	354 aa		31.02	■■■□□ 2.56
PVT1-204	ENST00000517525	ZBTB12	Q9Y330	459 aa	Predicted RBP	31.02	■■■□□ 2.56
PVT1-204	ENST00000517525	HTRA3	P83110	453 aa		31.01	■■■□□ 2.55
PVT1-204	ENST00000517525	MAP1S	Q66K74	1059 aa	Predicted RBP	31.01	■■■□□ 2.55
PVT1-204	ENST00000517525	ANKRD44	Q8N8A2	993 aa		31.01	■■■□□ 2.55
PVT1-204	ENST00000517525	KLRG1	Q96E93	195 aa		31.01	■■■□□ 2.55
PVT1-204	ENST00000517525	LDHAL6A	Q6ZMR3	332 aa		31	■■■□□ 2.55
PVT1-204	ENST00000517525	MICALL2	Q8IY33	904 aa		31	■■■□□ 2.55
PVT1-204	ENST00000517525	AGBL3	Q8NEM8	1001 aa		31	■■■□□ 2.55
PVT1-204	ENST00000517525	BICC1	Q9H694	974 aa	Known RBP	31	■■■□□ 2.55
PVT1-204	ENST00000517525	SPEF2	Q9C093	1822 aa		30.99	■■■□□ 2.55
PVT1-204	ENST00000517525	SCN9A	Q15858	1988 aa		30.99	■■■□□ 2.55
PVT1-204	ENST00000517525	ZBED9	Q6R2W3	1325 aa		30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	IRS2	Q9Y4H2	1338 aa		30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	HIRA	P54198	1017 aa	Predicted RBP	30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	TAF7L	Q5H9L4	462 aa		30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	RSBN1L	Q6PCB5	846 aa	Predicted RBP	30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	TXNRD3	Q86VQ6	643 aa		30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	ZNF594	Q96JF6	807 aa	Predicted RBP	30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	GML	Q99445	158 aa		30.98	■■■□□ 2.55
PVT1-204	ENST00000517525	USP17L3	A6NCW0	530 aa		30.97	■■■□□ 2.55
PVT1-204	ENST00000517525	USP17L4	A6NCW7	530 aa		30.97	■■■□□ 2.55
PVT1-204	ENST00000517525	USP17L1	Q7RTZ2	530 aa		30.97	■■■□□ 2.55
PVT1-204	ENST00000517525	JMY	Q8N9B5	988 aa		30.96	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms