RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 IGSF3O75054 1194 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SMC2O95347 1197 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 IPO7O95373 1038 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CD2BP2O95400 341 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 MAP4K4O95819 1239 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC3A2P08195 630 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SNRPA1P09661 255 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CSB-PGBD3P0DP91 1061 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PYGBP11216 843 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 FBLN1P23142 703 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SFPQP23246 707 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 HOXC9P31274 260 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CASQ1P31415 396 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 IL15P40933 162 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF75DP51815 510 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CABP4P57796 275 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 EIF4A1P60842 406 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SETQ01105 290 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 FAM160A1Q05DH4 1040 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 STK3Q13188 491 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 MTX1Q13505 466 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SNW1Q13573 536 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 NECTIN1Q15223 517 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 DIXDC1Q155Q3 683 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CAMK4Q16566 473 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 WASHC4Q2M389 1173 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC57Q2TAC2 916 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ESCO1Q5FWF5 840 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 BEND3Q5T5X7 828 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 NUTM2GQ5VZR2 741 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC102BQ68D86 513 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF530Q6P9A1 599 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMED8Q6PL24 325 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 NFXL1Q6ZNB6 911 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 Q6ZUG5 572 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 G2E3Q7L622 706 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PPFIBP1Q86W92 1011 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 FCHSD1Q86WN1 690 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 LRRC8AQ8IWT6 810 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 TRIM22Q8IYM9 498 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 IFNL2Q8IZJ0 200 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF397Q8NF99 534 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 NCOA7Q8NI08 942 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 MRPS27Q92552 414 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCNB2Q92953 911 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 DDX27Q96GQ7 796 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ERO1AQ96HE7 468 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 C8orf76Q96K31 380 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 TIGD1Q96MW7 591 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 TTC14Q96N46 770 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF830Q96NB3 372 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 FMNL2Q96PY5 1086 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 DSCC1Q9BVC3 393 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 NACAP1Q9BZK3 213 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 LSG1Q9H089 658 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 FAM107BQ9H098 131 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC8Q9H0W5 538 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 BOLA2Q9H3K6 86 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 CLSTN2Q9H4D0 955 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 TTC12Q9H892 705 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 GDPD2Q9HCC8 539 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 BRMS1Q9HCU9 246 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 GPR108Q9NPR9 543 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPTLC3Q9NUV7 552 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 DACT1Q9NYF0 836 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 RCOR1Q9UKL0 485 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PHF8Q9UPP1 1060 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 IQSEC3Q9UPP2 1182 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZDHHC9Q9Y397 364 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 FARP1Q9Y4F1 1045 aaPredicted RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PCDHB13Q9Y5F0 798 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 ADGRL3Q9HAR2 1447 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 MAP3K19Q56UN5 1328 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 USP42Q9H9J4 1324 aaKnown RBP2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PXDNLA1KZ92 1463 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 PTPRMP28827 1452 aa2.39□□□□□ -2.03
RNU1-40P-201ENST00000516816 USP31Q70CQ4 1352 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 TNRQ92752 1358 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 LRRC7Q96NW7 1537 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CHD2O14647 1828 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 A0A087WZG4 1122 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 A0A1W2PQ27 194 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 A0A1W2PQ64 194 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 A0A1W2PQD8 194 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC69A6NI79 296 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 IKBKBO14920 756 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPTLC2O15270 562 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 RNF113AO15541 343 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 RNMTO43148 476 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTIFO43310 598 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 PFKFB2O60825 505 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CUTAO60888 179 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 GADD45BO75293 160 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 BMP15O95972 392 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 IFIT1P09914 478 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 NBPF7P0C2Y1 421 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 UQCRFS1P1P0C7P4 283 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 TOP1P11387 765 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms