RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 PICALMQ13492 652 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
TRIM41-207ENST00000515223 ALS2CR12Q96Q35 445 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
TRIM41-207ENST00000515223 ZKSCAN5Q9Y2L8 839 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 ANXA1P04083 346 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
TRIM41-207ENST00000515223 LRRC45Q96CN5 670 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 GCOM1H8Y6P7 765 aaPredicted RBP18.34■□□□□ 0.53
TRIM41-207ENST00000515223 MYZAPP0CAP1 466 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 IL15P40933 162 aaPredicted RBP18.34■□□□□ 0.53
TRIM41-207ENST00000515223 SSX2IPQ9Y2D8 614 aa18.34■□□□□ 0.53
TRIM41-207ENST00000515223 POLR3AO14802 1390 aaPredicted RBP18.33■□□□□ 0.53
TRIM41-207ENST00000515223 SMARCC2Q8TAQ2 1214 aa18.33■□□□□ 0.53
TRIM41-207ENST00000515223 TMCO5BA8MYB1 307 aa18.33■□□□□ 0.53
TRIM41-207ENST00000515223 DNA2P51530 1060 aa18.33■□□□□ 0.53
TRIM41-207ENST00000515223 DZIP3Q86Y13 1208 aaKnown RBP18.33■□□□□ 0.53
TRIM41-207ENST00000515223 UHRF1BP1LA0JNW5 1464 aa18.33■□□□□ 0.53
TRIM41-207ENST00000515223 ALDH1L1O75891 902 aa18.33■□□□□ 0.52
TRIM41-207ENST00000515223 CCDC102BQ68D86 513 aa18.33■□□□□ 0.52
TRIM41-207ENST00000515223 SIRT1Q96EB6 747 aa18.33■□□□□ 0.52
TRIM41-207ENST00000515223 NAA15Q9BXJ9 866 aaKnown RBP18.33■□□□□ 0.52
TRIM41-207ENST00000515223 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.52
TRIM41-207ENST00000515223 TTC12Q9H892 705 aaPredicted RBP18.33■□□□□ 0.52
TRIM41-207ENST00000515223 GOPCQ9HD26 462 aa18.33■□□□□ 0.52
TRIM41-207ENST00000515223 IQSEC3Q9UPP2 1182 aaPredicted RBP18.33■□□□□ 0.52
TRIM41-207ENST00000515223 CPLX3Q8WVH0 158 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
TRIM41-207ENST00000515223 ZBTB43O43298 467 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 PHACTR2O75167 634 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 RBM26Q5T8P6 1007 aaKnown RBP18.32■□□□□ 0.52
TRIM41-207ENST00000515223 SYNCQ9H7C4 482 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 C6orf50Q9HD87 102 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 INCENPQ9NQS7 918 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 NOLC1Q14978 699 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRIM41-207ENST00000515223 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
TRIM41-207ENST00000515223 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 PLS1Q14651 629 aa18.32■□□□□ 0.52
TRIM41-207ENST00000515223 NUP160Q12769 1436 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 RHPN1Q8TCX5 695 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 ARHGEF12Q9NZN5 1544 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 CASQ1P31415 396 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 TNNI2P48788 182 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 LMBR1LQ6UX01 489 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 NOP2P46087 812 aaKnown RBP18.31■□□□□ 0.52
TRIM41-207ENST00000515223 RBM25P49756 843 aaKnown RBP18.31■□□□□ 0.52
TRIM41-207ENST00000515223 UBE2HP62256 183 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 GOLGA6L10A0A0M3HER8 536 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 KRT13P13646 458 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 TCHPQ9BT92 498 aa18.31■□□□□ 0.52
TRIM41-207ENST00000515223 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
TRIM41-207ENST00000515223 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 HOMER2Q9NSB8 354 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 PLVAPQ9BX97 442 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 GRM8O00222 908 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 KIF18AQ8NI77 898 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 TRERF1Q96PN7 1200 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 IMPG2Q9BZV3 1241 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 TMX1Q9H3N1 280 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 DNMT1P26358 1616 aaKnown RBP18.3■□□□□ 0.52
TRIM41-207ENST00000515223 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
TRIM41-207ENST00000515223 SPECC1Q5M775 1068 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 TBC1D5Q92609 795 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 TSNARE1Q96NA8 513 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 ANKRD2Q9GZV1 360 aa18.3■□□□□ 0.52
TRIM41-207ENST00000515223 WDR62O43379 1518 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 RTN1Q16799 776 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 TMCO3Q6UWJ1 677 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 UVSSAQ2YD98 709 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 RBSNQ9H1K0 784 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 URI1O94763 535 aaPredicted RBP18.29■□□□□ 0.52
TRIM41-207ENST00000515223 KIF4AO95239 1232 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 PRIMPOLQ96LW4 560 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 UHRF1BP1Q6BDS2 1440 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 EIF2AK4Q9P2K8 1649 aaKnown RBP18.29■□□□□ 0.52
TRIM41-207ENST00000515223 ZSCAN22P10073 491 aaPredicted RBP18.29■□□□□ 0.52
TRIM41-207ENST00000515223 PRPF4BQ13523 1007 aaKnown RBP18.29■□□□□ 0.52
TRIM41-207ENST00000515223 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 TRIM47Q96LD4 638 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 SYCP2Q9BX26 1530 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 STK32BQ9NY57 414 aa18.29■□□□□ 0.52
TRIM41-207ENST00000515223 IFI16Q16666 785 aaKnown RBP18.28■□□□□ 0.52
TRIM41-207ENST00000515223 SPDYE3A6NKU9 549 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 PDE1AP54750 535 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 SLC9C2Q5TAH2 1124 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 ARHGAP45Q92619 1136 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 WDR7Q9Y4E6 1490 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 NAPAP54920 295 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 RAB11FIP4Q86YS3 637 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 266.6 ms