RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ERCC4Q92889 916 aaPredicted RBP8.79□□□□□ -1
PDLIM5-219ENST00000514743 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 AOX1Q06278 1338 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 GIGYF1O75420 1035 aaPredicted RBP8.79□□□□□ -1
PDLIM5-219ENST00000514743 REC8O95072 547 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 ATP2B1P20020 1258 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 TEFQ10587 303 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 PES1O00541 588 aaKnown RBP8.78□□□□□ -1
PDLIM5-219ENST00000514743 CHMLP26374 656 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 MAP2K2P36507 400 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 FOXD4Q12950 439 aaPredicted RBP8.78□□□□□ -1
PDLIM5-219ENST00000514743 E2F4Q16254 413 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 ZSCAN26Q16670 478 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 CADPS2Q86UW7 1296 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 PI4K2BQ8TCG2 481 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 IL17RAQ96F46 866 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 SHANK3Q9BYB0 1731 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 DCCP43146 1447 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 ECEL1O95672 775 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 TRDNQ13061 729 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 ANKRD20A12PQ8NF67 263 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 IL1RAPL2Q9NP60 686 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 ABCA3Q99758 1704 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 SLC24A3Q9HC58 644 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.78□□□□□ -1
PDLIM5-219ENST00000514743 PALD1Q9ULE6 856 aa8.78□□□□□ -1
PDLIM5-219ENST00000514743 PKP1Q13835 747 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 PROSER2Q86WR7 435 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 MICALL1Q8N3F8 863 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 SDR16C5Q8N3Y7 309 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 C19orf44Q9H6X5 657 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 MTX1Q13505 466 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 UVSSAQ2YD98 709 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 C1orf141Q5JVX7 400 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 RHPN1Q8TCX5 695 aa8.77□□□□□ -1.01
PDLIM5-219ENST00000514743 NUP188Q5SRE5 1749 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 PAPPAQ13219 1627 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 SRGAP3O43295 1099 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 RAB11FIP3O75154 756 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 PDIA6Q15084 440 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 ZNF280DQ6N043 979 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 NUTM1Q86Y26 1132 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 TMEM94Q12767 1356 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 A0A1B0GUL7 405 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 TRIM66O15016 1216 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 GTPBP6O43824 516 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 GSCP56915 257 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 ZGPATQ8N5A5 531 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 KLHL23Q8NBE8 558 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 MKL1Q969V6 931 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 USP42Q9H9J4 1324 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 CCDC196A0A1B0GTZ2 297 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 MYO1CO00159 1063 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 SURF6O75683 361 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 NOLC1Q14978 699 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 TTC31Q49AM3 519 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 NME8Q8N427 588 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 GBP4Q96PP9 640 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 MAF1Q9H063 256 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 MAP3K2Q9Y2U5 619 aa8.76□□□□□ -1.01
PDLIM5-219ENST00000514743 ZC3H6P61129 1189 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 KIAA2012Q0VF49 1180 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 JAKMIP3Q5VZ66 844 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 NOL8Q76FK4 1167 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 APBB1IPQ7Z5R6 666 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 TBC1D22AQ8WUA7 517 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 RILPL2Q969X0 211 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 KAZALD1Q96I82 304 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 RMI1Q9H9A7 625 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 GOPCQ9HD26 462 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 ZDHHC9Q9Y397 364 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 TNS3Q68CZ2 1445 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 UTYO14607 1347 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 CCP110O43303 1012 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 ST18O60284 1047 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 BAG4O95429 457 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 KSR2Q6VAB6 950 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 KRT222Q8N1A0 295 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 CHAMP1Q96JM3 812 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 NUB1Q9Y5A7 615 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 TJP1Q07157 1748 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 NPHP3Q7Z494 1330 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 CHAF1AQ13111 956 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 CWF19L2Q2TBE0 894 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 ZCRB1Q8TBF4 217 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 KIF1BPQ96EK5 621 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 ZNF232Q9UNY5 417 aa8.75□□□□□ -1.01
PDLIM5-219ENST00000514743 ALDH1L1O75891 902 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 INHBEP58166 350 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 TSGA10IPQ3SY00 556 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 STRCQ7RTU9 1775 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 PLEKHG2Q9H7P9 1386 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 RAD50Q92878 1312 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 SKILP12757 684 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 SYT10Q6XYQ8 523 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms