RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 HALP42357 657 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 CDC37Q16543 378 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 TRMT2BQ96GJ1 504 aaKnown RBP7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 ST7Q9NRC1 585 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 DNAAF2Q9NVR5 837 aaKnown RBP7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 CUX1P39880 1505 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 KIF3CO14782 793 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 FIBPO43427 364 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 IFIT2P09913 472 aaKnown RBP7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 RPAINQ86UA6 219 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 MORC1Q86VD1 984 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 RNF135Q8IUD6 432 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 SLF2Q8IX21 1173 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 NIF3L1Q9GZT8 377 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 ZNF700Q9H0M5 742 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 FEZ2Q9UHY8 353 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 FANCD2Q9BXW9 1451 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 GLULP15104 373 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 SARSP49591 514 aaKnown RBP7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 PPM1FP49593 454 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 SAP130Q9H0E3 1048 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 ZBBXA8MT70 800 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 FZD6O60353 706 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 SNX2O60749 519 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 SEPT2Q15019 361 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 DNAJC21Q5F1R6 531 aaKnown RBP7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 KRT26Q7Z3Y9 468 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 MICALL2Q8IY33 904 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 CPXCR1Q8N123 301 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 MPP4Q96JB8 637 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 AGBL1Q96MI9 1066 aa7.66□□□□□ -1.18
TRAPPC11-209ENST00000512476 A0A1W2PRQ8 180 aa7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 RCCD1A6NED2 376 aa7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 SMAPO00193 183 aa7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 IRS4O14654 1257 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 INMTO95050 263 aa7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 NBPF9Q3BBW0 867 aa7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 CHADLQ6NUI6 762 aa7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 TBC1D20Q96BZ9 403 aa7.65□□□□□ -1.18
TRAPPC11-209ENST00000512476 PTPN12Q05209 780 aaKnown RBP7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 ALFQ53S48 1182 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 ZCCHC8Q6NZY4 707 aaKnown RBP7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 ANKRD23Q86SG2 305 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 SPDYE1Q8NFV5 336 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 LGR6Q9HBX8 967 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 EFR3BQ9Y2G0 817 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 PCDHGA10Q9Y5H3 936 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 VSTM5A8MXK1 200 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 NDUFB5O43674 189 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 SOGA1O94964 1423 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 ASMTLO95671 621 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 TSPAN7P41732 249 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 WASHC5Q12768 1159 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 MTA1Q13330 715 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 TCIRG1Q13488 830 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 MTMR1Q13613 665 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 MORC3Q14149 939 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 CFAP161Q6P656 301 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 LHFPL2Q6ZUX7 228 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 TSEN2Q8NCE0 465 aaKnown RBP7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 TRPM4Q8TD43 1214 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 PARD3BQ8TEW8 1205 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 HINFPQ9BQA5 517 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 CARD10Q9BWT7 1032 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 RIC8AQ9NPQ8 531 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 MRGBPQ9NV56 204 aa7.64□□□□□ -1.19
TRAPPC11-209ENST00000512476 GUCY2FP51841 1108 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 NFKB2Q00653 900 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 TUBB8Q3ZCM7 444 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 PHTF2Q8N3S3 785 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 PPHLN1Q8NEY8 458 aaKnown RBP7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 SELENOOQ9BVL4 669 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 CDH19Q9H159 772 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 SYNPO2Q9UMS6 1093 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 MYCLP1P12525 358 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 FLT3P36888 993 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 MLC1Q15049 377 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 MAATS1Q7Z4T9 603 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 SNX32Q86XE0 403 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 CCDC47Q96A33 483 aaKnown RBP7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.63□□□□□ -1.191e-8■■■■■ 41.9
TRAPPC11-209ENST00000512476 CNNM2Q9H8M5 875 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 CDV3Q9UKY7 258 aaKnown RBP7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 TRPC6Q9Y210 931 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 EEA1Q15075 1411 aa7.63□□□□□ -1.19
TRAPPC11-209ENST00000512476 STAT3P40763 770 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 APOBRQ0VD83 1088 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 MTMR2Q13614 643 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 ATCAYQ86WG3 371 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 FBF1Q8TES7 1133 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 NUDT16Q96DE0 195 aaKnown RBP7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 PCDHB9Q9Y5E1 797 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 MORC2Q9Y6X9 1032 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 A0A087X0B3 334 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 APAF1O14727 1248 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 RPN1P04843 607 aaKnown RBP7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 NPR3P17342 541 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 RENBPP51606 427 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms