RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 IFNL1Q8IU54 200 aa10.42□□□□□ -0.74
DEPDC1B-205ENST00000512078 ZNF34Q8IZ26 560 aa10.42□□□□□ -0.74
DEPDC1B-205ENST00000512078 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
DEPDC1B-205ENST00000512078 ECE2O60344 883 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 VIL1P09327 827 aaKnown RBP10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 INHBEP58166 350 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 SPRYD7Q5W111 196 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 TMC4Q7Z404 712 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 PPP1R42Q7Z4L9 355 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 NBPF11Q86T75 865 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 STXBP5LQ9Y2K9 1186 aa10.41□□□□□ -0.74
DEPDC1B-205ENST00000512078 MANSC4A6NHS7 340 aaPredicted RBP10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 GRAPQ13588 217 aa10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 SLC9C1Q4G0N8 1177 aa10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 GPR153Q6NV75 609 aa10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 KIF6Q6ZMV9 814 aa10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 GRAPLQ8TC17 118 aaPredicted RBP10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 DPF3Q92784 378 aa10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 KCNQ5Q9NR82 932 aa10.4□□□□□ -0.74
DEPDC1B-205ENST00000512078 CAP1Q01518 475 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 PTPN12Q05209 780 aaKnown RBP10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 TTLL7Q6ZT98 887 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 IGF2BP3O00425 579 aaKnown RBP eCLIP10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 NF2P35240 595 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 SP3Q02447 781 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 ANKRD13DQ6ZTN6 518 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 DDX46Q7L014 1031 aaKnown RBP10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 PANK3Q9H999 370 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
DEPDC1B-205ENST00000512078 WTIPA6NIX2 430 aaPredicted RBP10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 DIAPH1O60610 1272 aaKnown RBP10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 CRHR2Q13324 411 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 LDLRAD1Q5T700 205 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 PRAMEF18Q5VWM3 479 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 GIGYF2Q6Y7W6 1299 aaKnown RBP10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 ARMC9Q7Z3E5 817 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 NGEFQ8N5V2 710 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 AGBL3Q8NEM8 1001 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 MYOZ2Q9NPC6 264 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 VCANP13611 3396 aa10.38□□□□□ -0.75
DEPDC1B-205ENST00000512078 ZSWIM8A7E2V4 1837 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 ZBTB48P10074 688 aaPredicted RBP10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 DOK7Q18PE1 504 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 EYA3Q99504 573 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 HTATIP2Q9BUP3 242 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 UTP14AQ9BVJ6 771 aaKnown RBP10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 SCAF8Q9UPN6 1271 aaKnown RBP10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 NR2E3Q9Y5X4 410 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 ALPK3Q96L96 1907 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
DEPDC1B-205ENST00000512078 COL3A1P02461 1466 aaPredicted RBP10.36□□□□□ -0.75
DEPDC1B-205ENST00000512078 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
DEPDC1B-205ENST00000512078 DEFB123Q8N688 67 aa10.36□□□□□ -0.75
DEPDC1B-205ENST00000512078 POLR3GLQ9BT43 218 aa10.36□□□□□ -0.75
DEPDC1B-205ENST00000512078 NSFL1CQ9UNZ2 370 aaKnown RBP10.36□□□□□ -0.75
DEPDC1B-205ENST00000512078 SPTBN5Q9NRC6 3674 aaKnown RBP10.36□□□□□ -0.75
DEPDC1B-205ENST00000512078 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 ARHGEF6Q15052 776 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 UBE2Q1Q7Z7E8 422 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 GMLQ99445 158 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 COL4A1P02462 1669 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 ECM29Q5VYK3 1845 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 USP17L8P0C7I0 530 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 OTUD7BQ6GQQ9 843 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 WNK4Q96J92 1243 aa10.35□□□□□ -0.75
DEPDC1B-205ENST00000512078 MYCP01106 439 aaPredicted RBP10.34□□□□□ -0.75
DEPDC1B-205ENST00000512078 GPSM2P81274 684 aa10.34□□□□□ -0.75
DEPDC1B-205ENST00000512078 MTMR10Q9NXD2 777 aa10.34□□□□□ -0.75
DEPDC1B-205ENST00000512078 ANGEL1Q9UNK9 670 aaKnown RBP10.34□□□□□ -0.75
DEPDC1B-205ENST00000512078 OTOFQ9HC10 1997 aa10.34□□□□□ -0.75
DEPDC1B-205ENST00000512078 TTC28Q96AY4 2481 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 HCLS1P14317 486 aaPredicted RBP10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 PRKG1Q13976 671 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 MAP3K11Q16584 847 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 NBPF9Q3BBW0 867 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 Q7L0L9 218 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 TBC1D16Q8TBP0 767 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 SH3TC2Q8TF17 1288 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 RRP7AQ9Y3A4 280 aaKnown RBP10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 COL1A1P02452 1464 aaPredicted RBP10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 SSC5DA1L4H1 1573 aa10.33□□□□□ -0.76
DEPDC1B-205ENST00000512078 TESPA1A2RU30 521 aaPredicted RBP10.32□□□□□ -0.76
DEPDC1B-205ENST00000512078 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
DEPDC1B-205ENST00000512078 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
DEPDC1B-205ENST00000512078 ZC3H12CQ9C0D7 883 aaKnown RBP10.32□□□□□ -0.76
DEPDC1B-205ENST00000512078 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
DEPDC1B-205ENST00000512078 MYL6BP14649 208 aa10.31□□□□□ -0.76
DEPDC1B-205ENST00000512078 COL9A1P20849 921 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms