RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 GRM8O00222 908 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 A1BGP04217 495 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 ACSBG1Q96GR2 724 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 LY75O60449 1722 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 A0A087WZG4 1122 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 NUCB1Q02818 461 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
NR1I3-230ENST00000511944 GCKRQ14397 625 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
NR1I3-230ENST00000511944 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
NR1I3-230ENST00000511944 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
NR1I3-230ENST00000511944 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-230ENST00000511944 KCNQ2O43526 872 aa11.31□□□□□ -0.6
NR1I3-230ENST00000511944 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
NR1I3-230ENST00000511944 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
NR1I3-230ENST00000511944 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
NR1I3-230ENST00000511944 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
NR1I3-230ENST00000511944 OATP04181 439 aa11.3□□□□□ -0.6
NR1I3-230ENST00000511944 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
NR1I3-230ENST00000511944 INTS5Q6P9B9 1019 aaKnown RBP11.3□□□□□ -0.6
NR1I3-230ENST00000511944 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
NR1I3-230ENST00000511944 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
NR1I3-230ENST00000511944 AK7Q96M32 723 aa11.3□□□□□ -0.6
NR1I3-230ENST00000511944 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
NR1I3-230ENST00000511944 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-230ENST00000511944 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-230ENST00000511944 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 TRIM66O15016 1216 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-230ENST00000511944 RXRBP28702 533 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 CLEC4GQ6UXB4 293 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 MYD88Q99836 296 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
NR1I3-230ENST00000511944 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
NR1I3-230ENST00000511944 H7C1W4 665 aa11.28□□□□□ -0.6
NR1I3-230ENST00000511944 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
NR1I3-230ENST00000511944 ITPK1Q13572 414 aa11.28□□□□□ -0.6
NR1I3-230ENST00000511944 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
NR1I3-230ENST00000511944 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-230ENST00000511944 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
NR1I3-230ENST00000511944 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
NR1I3-230ENST00000511944 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
NR1I3-230ENST00000511944 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
NR1I3-230ENST00000511944 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
NR1I3-230ENST00000511944 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
NR1I3-230ENST00000511944 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
NR1I3-230ENST00000511944 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-230ENST00000511944 CASP7P55210 303 aa11.27□□□□□ -0.61
NR1I3-230ENST00000511944 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
NR1I3-230ENST00000511944 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
NR1I3-230ENST00000511944 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
NR1I3-230ENST00000511944 PLA2G12BQ9BX93 195 aa11.27□□□□□ -0.61
NR1I3-230ENST00000511944 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.61
NR1I3-230ENST00000511944 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
NR1I3-230ENST00000511944 PLSCR1O15162 318 aa11.26□□□□□ -0.61
NR1I3-230ENST00000511944 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
NR1I3-230ENST00000511944 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-230ENST00000511944 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
NR1I3-230ENST00000511944 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
NR1I3-230ENST00000511944 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
NR1I3-230ENST00000511944 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-230ENST00000511944 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
NR1I3-230ENST00000511944 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
NR1I3-230ENST00000511944 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
NR1I3-230ENST00000511944 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
NR1I3-230ENST00000511944 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
NR1I3-230ENST00000511944 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
NR1I3-230ENST00000511944 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-230ENST00000511944 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 TAF1LQ8IZX4 1826 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 AOX1Q06278 1338 aa11.24□□□□□ -0.61
NR1I3-230ENST00000511944 DNAJB2P25686 324 aa11.23□□□□□ -0.61
NR1I3-230ENST00000511944 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
NR1I3-230ENST00000511944 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
NR1I3-230ENST00000511944 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms