RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 IL27Q8NEV9 243 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 ACSBG1Q96GR2 724 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 TIGD1Q96MW7 591 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 PYM1Q9BRP8 204 aaKnown RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 CCDC8Q9H0W5 538 aaPredicted RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 C6orf50Q9HD87 102 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 ANO10Q9NW15 660 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 MYOM2P54296 1465 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 NBPF7P0C2Y1 421 aaPredicted RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 SPOUT1Q5T280 376 aaKnown RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 CADPS2Q86UW7 1296 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 CHD1LQ86WJ1 897 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 IFNL2Q8IZJ0 200 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 CPLX3Q8WVH0 158 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 MLH3Q9UHC1 1453 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 PTPRTO14522 1441 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 ZMYM4Q5VZL5 1548 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 RIOK3O14730 519 aaKnown RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 PSMC4P43686 418 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 KIAA1524Q8TCG1 905 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 BBXQ8WY36 941 aaPredicted RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 SMARCC1Q92922 1105 aaPredicted RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 CWC25Q9NXE8 425 aaPredicted RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 IVNS1ABPQ9Y6Y0 642 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 KIAA0753Q2KHM9 967 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 FBXO31Q5XUX0 539 aaPredicted RBP6.6□□□□□ -1.35
USP38-203ENST00000511739 MRVI1Q9Y6F6 885 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 RIMS2Q9UQ26 1411 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 ATP6V1AP38606 617 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 IARSP41252 1262 aaKnown RBP6.6□□□□□ -1.35
USP38-203ENST00000511739 CAMK4Q16566 473 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 IFI16Q16666 785 aaKnown RBP6.6□□□□□ -1.35
USP38-203ENST00000511739 MSANTD4Q8NCY6 345 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 TTC12Q9H892 705 aaPredicted RBP6.6□□□□□ -1.35
USP38-203ENST00000511739 A0A1W2PRG0 241 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 CASQ1P31415 396 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 MCM10Q7L590 875 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 ZNF804AQ7Z570 1209 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 CCDC144CPQ8IYA2 1237 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 SIRT1Q96EB6 747 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 UNC13BO14795 1591 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 BACH1O14867 736 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 CEP135Q66GS9 1140 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 STK32BQ9NY57 414 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 MAP7D1Q3KQU3 841 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 KMT5BQ4FZB7 885 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 SPAG5Q96R06 1193 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 EYA3Q99504 573 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 EXOC1Q9NV70 894 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 CEP83Q9Y592 693 aa6.6□□□□□ -1.35
USP38-203ENST00000511739 KDM5AP29375 1690 aaKnown RBP6.59□□□□□ -1.35
USP38-203ENST00000511739 UQCRFS1P1P0C7P4 283 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 SNRKQ9NRH2 765 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 TXNDC16Q9P2K2 825 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 DBF4Q9UBU7 674 aaPredicted RBP6.59□□□□□ -1.35
USP38-203ENST00000511739 RNF123Q5XPI4 1314 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 CALM1P0DP23 149 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 CALM2P0DP24 149 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 CALM3P0DP25 149 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 WAPLQ7Z5K2 1190 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 CCDC63Q8NA47 563 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 SMC1BQ8NDV3 1235 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 DNAAF4Q8WXU2 420 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 TET3O43151 1660 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 SPDYE3A6NKU9 549 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 GAS8O95995 478 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 MX1P20591 662 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 GJC1P36383 396 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 SP4Q02446 784 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 FBF1Q8TES7 1133 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 ARHGAP45Q92619 1136 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 BLMP54132 1417 aaPredicted RBP6.59□□□□□ -1.35
USP38-203ENST00000511739 GOLIM4O00461 696 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 CCT2P78371 535 aaKnown RBP6.59□□□□□ -1.35
USP38-203ENST00000511739 NACA2Q9H009 215 aa6.59□□□□□ -1.35
USP38-203ENST00000511739 FAM13AO94988 1023 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 EEF2P13639 858 aaKnown RBP6.59□□□□□ -1.36
USP38-203ENST00000511739 SLC8A3P57103 927 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 MXRA7P84157 204 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 SPECC1LQ69YQ0 1117 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 PICK1Q9NRD5 415 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 TMOD4Q9NZQ9 345 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 CIZ1Q9ULV3 898 aaPredicted RBP6.59□□□□□ -1.36
USP38-203ENST00000511739 AMOTL2Q9Y2J4 779 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 MAGI2Q86UL8 1455 aa6.59□□□□□ -1.36
USP38-203ENST00000511739 DDB1Q16531 1140 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 MICU3Q86XE3 530 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 NYXQ9GZU5 481 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 SCAND2PQ9GZW5 306 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 CLIP2Q9UDT6 1046 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 FAM169AQ9Y6X4 670 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 KIF1BO60333 1816 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 ATP5J2-PTCD1G3V325 749 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 KIF2AO00139 706 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 URI1O94763 535 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 PLCB3Q01970 1234 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 RNF34Q969K3 372 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 RTCBQ9Y3I0 505 aaKnown RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 USP16Q9Y5T5 823 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 MSH6P52701 1360 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms