RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 MTX1Q13505 466 aa21.68■■□□□ 1.06
CLDND1-221ENST00000510541 WASHC4Q2M389 1173 aa21.68■■□□□ 1.06
CLDND1-221ENST00000510541 C15orf52Q6ZUT6 534 aaKnown RBP21.68■■□□□ 1.06
CLDND1-221ENST00000510541 GPC2Q8N158 579 aa21.68■■□□□ 1.06
CLDND1-221ENST00000510541 LARGE2Q8N3Y3 721 aa21.68■■□□□ 1.06
CLDND1-221ENST00000510541 BICC1Q9H694 974 aaKnown RBP21.68■■□□□ 1.06
CLDND1-221ENST00000510541 GGA1Q9UJY5 639 aa21.68■■□□□ 1.06
CLDND1-221ENST00000510541 ZNRF3Q9ULT6 936 aa21.68■■□□□ 1.06
CLDND1-221ENST00000510541 PPIP5K2O43314 1243 aa21.67■■□□□ 1.06
CLDND1-221ENST00000510541 COL4A5P29400 1685 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 ZNF609O15014 1411 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 MED23Q9ULK4 1368 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 KIF3CO14782 793 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 NIM1KQ8IY84 436 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 ANKIB1Q9P2G1 1089 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 RCAN3Q9UKA8 241 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 SCN4AP35499 1836 aa21.66■■□□□ 1.06
CLDND1-221ENST00000510541 VEGFAP15692 232 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-221ENST00000510541 DZIP1LQ8IYY4 767 aaKnown RBP21.65■■□□□ 1.06
CLDND1-221ENST00000510541 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-221ENST00000510541 CCDC85AQ96PX6 553 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-221ENST00000510541 EIF6P56537 245 aaKnown RBP21.64■■□□□ 1.05
CLDND1-221ENST00000510541 AOC3Q16853 763 aa21.64■■□□□ 1.05
CLDND1-221ENST00000510541 ZC3H12CQ9C0D7 883 aaKnown RBP21.64■■□□□ 1.05
CLDND1-221ENST00000510541 IQCA1LA6NCM1 817 aa21.63■■□□□ 1.05
CLDND1-221ENST00000510541 LDHAL6AQ6ZMR3 332 aa21.63■■□□□ 1.05
CLDND1-221ENST00000510541 SLC51AQ86UW1 340 aa21.63■■□□□ 1.05
CLDND1-221ENST00000510541 RIPOR2Q9Y4F9 1068 aa21.63■■□□□ 1.05
CLDND1-221ENST00000510541 MROH5Q6ZUA9 1318 aa21.62■■□□□ 1.05
CLDND1-221ENST00000510541 POTECB2RU33 542 aa21.62■■□□□ 1.05
CLDND1-221ENST00000510541 C6orf229H3BNL8 230 aa21.62■■□□□ 1.05
CLDND1-221ENST00000510541 UFL1O94874 794 aa21.62■■□□□ 1.05
CLDND1-221ENST00000510541 CHRNDQ07001 517 aa21.62■■□□□ 1.05
CLDND1-221ENST00000510541 PODNQ7Z5L7 613 aa21.62■■□□□ 1.05
CLDND1-221ENST00000510541 MEIS3Q99687 375 aa21.62■■□□□ 1.05
CLDND1-221ENST00000510541 ZBTB22O15209 634 aa21.61■■□□□ 1.05
CLDND1-221ENST00000510541 TOMM70O94826 608 aa21.61■■□□□ 1.05
CLDND1-221ENST00000510541 RFX5P48382 616 aaPredicted RBP21.61■■□□□ 1.05
CLDND1-221ENST00000510541 PDE3AQ14432 1141 aa21.61■■□□□ 1.05
CLDND1-221ENST00000510541 TNIP1Q15025 636 aa21.61■■□□□ 1.05
CLDND1-221ENST00000510541 FTSJ3Q8IY81 847 aaKnown RBP21.61■■□□□ 1.05
CLDND1-221ENST00000510541 IRS2Q9Y4H2 1338 aa21.6■■□□□ 1.05
CLDND1-221ENST00000510541 CIAO1O76071 339 aa21.6■■□□□ 1.05
CLDND1-221ENST00000510541 MMP14P50281 582 aa21.6■■□□□ 1.05
CLDND1-221ENST00000510541 UBE4AQ14139 1066 aa21.6■■□□□ 1.05
CLDND1-221ENST00000510541 TAF7LQ5H9L4 462 aa21.6■■□□□ 1.05
CLDND1-221ENST00000510541 TMEM57Q8N5G2 664 aa21.6■■□□□ 1.05
CLDND1-221ENST00000510541 CHMP4BQ9H444 224 aaKnown RBP21.6■■□□□ 1.05
CLDND1-221ENST00000510541 A0A1B0GUL6 1792 aa21.6■■□□□ 1.05
CLDND1-221ENST00000510541 ZNF804BA4D1E1 1349 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 ZBTB7BO15156 539 aaPredicted RBP21.59■■□□□ 1.05
CLDND1-221ENST00000510541 DDNO94850 711 aaPredicted RBP21.59■■□□□ 1.05
CLDND1-221ENST00000510541 GNAI2P04899 355 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 PTPN12Q05209 780 aaKnown RBP21.59■■□□□ 1.05
CLDND1-221ENST00000510541 CXCL9Q07325 125 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
CLDND1-221ENST00000510541 RBM46Q8TBY0 533 aaKnown RBP21.59■■□□□ 1.05
CLDND1-221ENST00000510541 COA1Q9GZY4 146 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 NMRK2Q9NPI5 230 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 COPRSQ9NQ92 184 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 CHMP3Q9Y3E7 222 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 SPEF2Q9C093 1822 aa21.59■■□□□ 1.05
CLDND1-221ENST00000510541 PSME4Q14997 1843 aa21.58■■□□□ 1.05
CLDND1-221ENST00000510541 RPS12P25398 132 aaKnown RBP21.58■■□□□ 1.05
CLDND1-221ENST00000510541 DPF2Q92785 391 aa21.58■■□□□ 1.05
CLDND1-221ENST00000510541 LRRFIP2Q9Y608 721 aaKnown RBP21.58■■□□□ 1.05
CLDND1-221ENST00000510541 YDJCA8MPS7 323 aa21.57■■□□□ 1.04
CLDND1-221ENST00000510541 CIAPIN1Q6FI81 312 aa21.57■■□□□ 1.04
CLDND1-221ENST00000510541 CLUAP1Q96AJ1 413 aa21.57■■□□□ 1.04
CLDND1-221ENST00000510541 CNNM1Q9NRU3 951 aa21.57■■□□□ 1.04
CLDND1-221ENST00000510541 VIL1P09327 827 aaKnown RBP21.56■■□□□ 1.04
CLDND1-221ENST00000510541 RLBP1P12271 317 aa21.56■■□□□ 1.04
CLDND1-221ENST00000510541 FSTL1Q12841 308 aa21.56■■□□□ 1.04
CLDND1-221ENST00000510541 PNMA8AQ86V59 439 aaPredicted RBP21.56■■□□□ 1.04
CLDND1-221ENST00000510541 VGLL2Q8N8G2 317 aa21.56■■□□□ 1.04
CLDND1-221ENST00000510541 RRAGCQ9HB90 399 aa21.56■■□□□ 1.04
CLDND1-221ENST00000510541 EYA2O00167 538 aa21.55■■□□□ 1.04
CLDND1-221ENST00000510541 ECE2O60344 883 aa21.55■■□□□ 1.04
CLDND1-221ENST00000510541 ZNF594Q96JF6 807 aaPredicted RBP21.55■■□□□ 1.04
CLDND1-221ENST00000510541 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
CLDND1-221ENST00000510541 PDE8BO95263 885 aa21.54■■□□□ 1.04
CLDND1-221ENST00000510541 C1QTNF8P60827 252 aa21.54■■□□□ 1.04
CLDND1-221ENST00000510541 ZNF526Q8TF50 670 aaPredicted RBP21.54■■□□□ 1.04
CLDND1-221ENST00000510541 HACL1Q9UJ83 578 aa21.54■■□□□ 1.04
CLDND1-221ENST00000510541 DDX19BQ9UMR2 479 aa21.54■■□□□ 1.04
CLDND1-221ENST00000510541 SCNN1DP51172 638 aa21.53■■□□□ 1.04
CLDND1-221ENST00000510541 MVPQ14764 893 aaKnown RBP21.53■■□□□ 1.04
CLDND1-221ENST00000510541 TAF1DQ9H5J8 278 aaPredicted RBP21.53■■□□□ 1.04
CLDND1-221ENST00000510541 GPRC5DQ9NZD1 345 aa21.53■■□□□ 1.04
CLDND1-221ENST00000510541 IL1R1P14778 569 aa21.52■■□□□ 1.04
CLDND1-221ENST00000510541 IL15P40933 162 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-221ENST00000510541 ATG9AQ7Z3C6 839 aa21.52■■□□□ 1.04
CLDND1-221ENST00000510541 C16orf71Q8IYS4 520 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-221ENST00000510541 AGBL3Q8NEM8 1001 aa21.52■■□□□ 1.04
CLDND1-221ENST00000510541 MYO3BQ8WXR4 1341 aa21.52■■□□□ 1.03
CLDND1-221ENST00000510541 ADAMTSL1Q8N6G6 1762 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 SCN9AQ15858 1988 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 FKBP1AP62942 108 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms