RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 BSDC1Q9NW68 430 aaPredicted RBP30.54■■■□□ 2.48
SRPK1-210ENST00000508473 CHMP3Q9Y3E7 222 aa30.54■■■□□ 2.48
SRPK1-210ENST00000508473 RAD17O75943 681 aa30.53■■■□□ 2.48
SRPK1-210ENST00000508473 IGHMBP2P38935 993 aaKnown RBP30.53■■■□□ 2.48
SRPK1-210ENST00000508473 DBNDD1Q9H9R9 158 aa30.53■■■□□ 2.48
SRPK1-210ENST00000508473 YDJCA8MPS7 323 aa30.52■■■□□ 2.48
SRPK1-210ENST00000508473 EPHX2P34913 555 aa30.52■■■□□ 2.48
SRPK1-210ENST00000508473 DOK7Q18PE1 504 aa30.52■■■□□ 2.48
SRPK1-210ENST00000508473 EAPPQ56P03 285 aaPredicted RBP30.52■■■□□ 2.48
SRPK1-210ENST00000508473 MINPP1Q9UNW1 487 aa30.52■■■□□ 2.48
SRPK1-210ENST00000508473 XDHP47989 1333 aa30.51■■■□□ 2.48
SRPK1-210ENST00000508473 CIAPIN1Q6FI81 312 aa30.51■■■□□ 2.47
SRPK1-210ENST00000508473 LMBR1LQ6UX01 489 aa30.51■■■□□ 2.47
SRPK1-210ENST00000508473 ZC3H12CQ9C0D7 883 aaKnown RBP30.51■■■□□ 2.47
SRPK1-210ENST00000508473 LTBP1Q14766 1721 aa30.5■■■□□ 2.47
SRPK1-210ENST00000508473 ANKRD18BA2A2Z9 1011 aa30.5■■■□□ 2.47
SRPK1-210ENST00000508473 NBPF7P0C2Y1 421 aaPredicted RBP30.5■■■□□ 2.47
SRPK1-210ENST00000508473 LMOD1P29536 600 aaPredicted RBP30.5■■■□□ 2.47
SRPK1-210ENST00000508473 SCNN1DP51172 638 aa30.5■■■□□ 2.47
SRPK1-210ENST00000508473 SUCLG2Q96I99 432 aa30.5■■■□□ 2.47
SRPK1-210ENST00000508473 NOB1Q9ULX3 412 aaKnown RBP30.5■■■□□ 2.47
SRPK1-210ENST00000508473 WTIPA6NIX2 430 aaPredicted RBP30.49■■■□□ 2.47
SRPK1-210ENST00000508473 RARSP54136 660 aaKnown RBP30.49■■■□□ 2.47
SRPK1-210ENST00000508473 MPHOSPH8Q99549 860 aa30.49■■■□□ 2.47
SRPK1-210ENST00000508473 SCN4AP35499 1836 aa30.48■■■□□ 2.47
SRPK1-210ENST00000508473 ATP2B4P23634 1241 aa30.48■■■□□ 2.47
SRPK1-210ENST00000508473 EPS15P42566 896 aa30.48■■■□□ 2.47
SRPK1-210ENST00000508473 IFIT5Q13325 482 aaKnown RBP30.48■■■□□ 2.47
SRPK1-210ENST00000508473 CHADLQ6NUI6 762 aa30.48■■■□□ 2.47
SRPK1-210ENST00000508473 ECE2O60344 883 aa30.47■■■□□ 2.47
SRPK1-210ENST00000508473 TNIP1Q15025 636 aa30.47■■■□□ 2.47
SRPK1-210ENST00000508473 CLEC11AQ9Y240 323 aa30.47■■■□□ 2.47
SRPK1-210ENST00000508473 G3V3G9 751 aa30.46■■■□□ 2.47
SRPK1-210ENST00000508473 GMPSP49915 693 aaPredicted RBP30.46■■■□□ 2.47
SRPK1-210ENST00000508473 APLP1P51693 650 aa30.46■■■□□ 2.47
SRPK1-210ENST00000508473 DCAF8Q5TAQ9 597 aa30.46■■■□□ 2.47
SRPK1-210ENST00000508473 LDHDQ86WU2 507 aa30.46■■■□□ 2.47
SRPK1-210ENST00000508473 SPEF2Q9C093 1822 aa30.45■■■□□ 2.47
SRPK1-210ENST00000508473 KAZALD1Q96I82 304 aa30.45■■■□□ 2.47
SRPK1-210ENST00000508473 KCNQ5Q9NR82 932 aa30.45■■■□□ 2.47
SRPK1-210ENST00000508473 UTYO14607 1347 aa30.45■■■□□ 2.46
SRPK1-210ENST00000508473 CCT4P50991 539 aaKnown RBP30.44■■■□□ 2.46
SRPK1-210ENST00000508473 ZNF594Q96JF6 807 aaPredicted RBP30.44■■■□□ 2.46
SRPK1-210ENST00000508473 PSMD14O00487 310 aa30.43■■■□□ 2.46
SRPK1-210ENST00000508473 BRPF1P55201 1214 aaPredicted RBP30.43■■■□□ 2.46
SRPK1-210ENST00000508473 HTRA3P83110 453 aa30.43■■■□□ 2.46
SRPK1-210ENST00000508473 CCDC57Q2TAC2 916 aa30.43■■■□□ 2.46
SRPK1-210ENST00000508473 PNMA8AQ86V59 439 aaPredicted RBP30.43■■■□□ 2.46
SRPK1-210ENST00000508473 GPRC5DQ9NZD1 345 aa30.43■■■□□ 2.46
SRPK1-210ENST00000508473 TAF7LQ5H9L4 462 aa30.42■■■□□ 2.46
SRPK1-210ENST00000508473 API5Q9BZZ5 524 aaKnown RBP30.42■■■□□ 2.46
SRPK1-210ENST00000508473 USP44Q9H0E7 712 aa30.42■■■□□ 2.46
SRPK1-210ENST00000508473 ZBTB12Q9Y330 459 aaPredicted RBP30.42■■■□□ 2.46
SRPK1-210ENST00000508473 CHRNDQ07001 517 aa30.41■■■□□ 2.46
SRPK1-210ENST00000508473 ANKRD2Q9GZV1 360 aa30.41■■■□□ 2.46
SRPK1-210ENST00000508473 BICC1Q9H694 974 aaKnown RBP30.41■■■□□ 2.46
SRPK1-210ENST00000508473 HELBQ8NG08 1087 aaPredicted RBP30.39■■■□□ 2.46
SRPK1-210ENST00000508473 LEMD3Q9Y2U8 911 aa30.39■■■□□ 2.46
SRPK1-210ENST00000508473 SHTN1A0MZ66 631 aa30.38■■■□□ 2.45
SRPK1-210ENST00000508473 BCAR3O75815 825 aa30.38■■■□□ 2.45
SRPK1-210ENST00000508473 ZBED9Q6R2W3 1325 aa30.38■■■□□ 2.45
SRPK1-210ENST00000508473 TAF5LO75529 589 aa30.37■■■□□ 2.45
SRPK1-210ENST00000508473 KCNJ4P48050 445 aa30.37■■■□□ 2.45
SRPK1-210ENST00000508473 MAP1SQ66K74 1059 aaPredicted RBP30.37■■■□□ 2.45
SRPK1-210ENST00000508473 ANKRD44Q8N8A2 993 aa30.37■■■□□ 2.45
SRPK1-210ENST00000508473 ADARB2Q9NS39 739 aaKnown RBP30.37■■■□□ 2.45
SRPK1-210ENST00000508473 ZNF804BA4D1E1 1349 aa30.37■■■□□ 2.45
SRPK1-210ENST00000508473 KIF16BQ96L93 1317 aa30.37■■■□□ 2.45
SRPK1-210ENST00000508473 MED23Q9ULK4 1368 aa30.37■■■□□ 2.45
SRPK1-210ENST00000508473 KLRK1P26718 216 aa30.36■■■□□ 2.45
SRPK1-210ENST00000508473 LDHAL6AQ6ZMR3 332 aa30.36■■■□□ 2.45
SRPK1-210ENST00000508473 USP50Q70EL3 339 aaPredicted RBP30.36■■■□□ 2.45
SRPK1-210ENST00000508473 TXNRD3Q86VQ6 643 aa30.36■■■□□ 2.45
SRPK1-210ENST00000508473 CNNM1Q9NRU3 951 aa30.36■■■□□ 2.45
SRPK1-210ENST00000508473 CNOT7Q9UIV1 285 aaKnown RBP30.36■■■□□ 2.45
SRPK1-210ENST00000508473 SNAP23O00161 211 aa30.35■■■□□ 2.45
SRPK1-210ENST00000508473 RABL6Q3YEC7 729 aaPredicted RBP30.35■■■□□ 2.45
SRPK1-210ENST00000508473 PLIN1O60240 522 aa30.34■■■□□ 2.45
SRPK1-210ENST00000508473 MICALL2Q8IY33 904 aa30.34■■■□□ 2.45
SRPK1-210ENST00000508473 FRAT1Q92837 279 aaPredicted RBP30.34■■■□□ 2.45
SRPK1-210ENST00000508473 CNTROBQ8N137 903 aa30.33■■■□□ 2.45
SRPK1-210ENST00000508473 ARHGAP45Q92619 1136 aa30.33■■■□□ 2.45
SRPK1-210ENST00000508473 ADAMTSL1Q8N6G6 1762 aa30.33■■■□□ 2.45
SRPK1-210ENST00000508473 H7C1D1 291 aa30.32■■■□□ 2.44
SRPK1-210ENST00000508473 VIL1P09327 827 aaKnown RBP30.32■■■□□ 2.44
SRPK1-210ENST00000508473 PODNQ7Z5L7 613 aa30.32■■■□□ 2.44
SRPK1-210ENST00000508473 DPF2Q92785 391 aa30.32■■■□□ 2.44
SRPK1-210ENST00000508473 PUS3Q9BZE2 481 aaKnown RBP30.32■■■□□ 2.44
SRPK1-210ENST00000508473 ITGBL1O95965 494 aaPredicted RBP30.31■■■□□ 2.44
SRPK1-210ENST00000508473 TRPM4Q8TD43 1214 aa30.31■■■□□ 2.44
SRPK1-210ENST00000508473 TNNQ9UQP3 1299 aa30.31■■■□□ 2.44
SRPK1-210ENST00000508473 SCN9AQ15858 1988 aa30.31■■■□□ 2.44
SRPK1-210ENST00000508473 IPO8O15397 1037 aaKnown RBP30.3■■■□□ 2.44
SRPK1-210ENST00000508473 UBTFL1P0CB47 393 aaPredicted RBP30.3■■■□□ 2.44
SRPK1-210ENST00000508473 RPS12P25398 132 aaKnown RBP30.3■■■□□ 2.44
SRPK1-210ENST00000508473 PASKQ96RG2 1323 aa30.29■■■□□ 2.44
SRPK1-210ENST00000508473 DNAJC5GQ8N7S2 189 aa30.29■■■□□ 2.44
SRPK1-210ENST00000508473 FBXW7Q969H0 707 aa30.29■■■□□ 2.44
SRPK1-210ENST00000508473 COA1Q9GZY4 146 aa30.29■■■□□ 2.44
SRPK1-210ENST00000508473 USP17L3A6NCW0 530 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms