RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 HDGFL1Q5TGJ6 251 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 EXOC4Q96A65 974 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 ACSBG1Q96GR2 724 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 TACO1Q9BSH4 297 aaKnown RBP7.21□□□□□ -1.25
KDM3B-204ENST00000507996 STK31Q9BXU1 1019 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 LCMT1Q9UIC8 334 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 LRRFIP2Q9Y608 721 aaKnown RBP7.21□□□□□ -1.25
KDM3B-204ENST00000507996 IPO8O15397 1037 aaKnown RBP7.21□□□□□ -1.26
KDM3B-204ENST00000507996 EIF4A1P60842 406 aaKnown RBP7.21□□□□□ -1.26
KDM3B-204ENST00000507996 ELF2Q15723 593 aa7.21□□□□□ -1.26
KDM3B-204ENST00000507996 CCDC93Q567U6 631 aa7.21□□□□□ -1.26
KDM3B-204ENST00000507996 MRPL50Q8N5N7 158 aaKnown RBP7.21□□□□□ -1.26
KDM3B-204ENST00000507996 CCDC191Q8NCU4 936 aa7.21□□□□□ -1.26
KDM3B-204ENST00000507996 KDM6AO15550 1401 aaPredicted RBP7.21□□□□□ -1.26
KDM3B-204ENST00000507996 TRIM66O15016 1216 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 IVLP07476 585 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 FAM182BQ5T319 152 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 ZNF790Q6PG37 636 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 SLC4A10Q6U841 1118 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 C10orf67Q8IYJ2 551 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 TMX3Q96JJ7 454 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 TRERF1Q96PN7 1200 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 CXorf56Q9H5V9 222 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 AFF2P51816 1311 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 LRP6O75581 1613 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 SPATA31A5Q5VU36 1347 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 SPATA31A7Q8IWB4 1347 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 PIP4K2AP48426 406 aaPredicted RBP7.2□□□□□ -1.26
KDM3B-204ENST00000507996 CLCN6P51797 869 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 GYS2P54840 703 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 CCDC30Q5VVM6 783 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 MPNDQ8N594 471 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 NEK11Q8NG66 645 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 FAM200AQ8TCP9 573 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 ZNF428Q96B54 188 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 TMOD3Q9NYL9 352 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 PLCH1Q4KWH8 1693 aa7.2□□□□□ -1.26
KDM3B-204ENST00000507996 MCTP2Q6DN12 878 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 G2E3Q7L622 706 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 PACS2Q86VP3 889 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 PLEKHM2Q8IWE5 1019 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 SMARCE1Q969G3 411 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 CHAMP1Q96JM3 812 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 CCDC196A0A1B0GTZ2 297 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 CCDC189A1A4V9 331 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 ECM2O94769 699 aaPredicted RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 KCNJ6P48051 423 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 ANAPC15P60006 121 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 TPD52L1Q16890 204 aaPredicted RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 REXO1L1PQ8IX06 675 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 MSL3Q8N5Y2 521 aaKnown RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 PPM1EQ8WY54 764 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 ZNF496Q96IT1 587 aaPredicted RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 DEF6Q9H4E7 631 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 F6X3S4 739 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 CCDC192P0DO97 292 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 MYL6BP14649 208 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 ZNF75DP51815 510 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 AIMP1Q12904 312 aaKnown RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 ANKRD45Q5TZF3 282 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 FNBP4Q8N3X1 1017 aaPredicted RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 TDRD7Q8NHU6 1098 aaKnown RBP7.19□□□□□ -1.26
KDM3B-204ENST00000507996 ARHGAP45Q92619 1136 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 AK7Q96M32 723 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 CHPF2Q9P2E5 772 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 SLIT2O94813 1529 aa7.19□□□□□ -1.26
KDM3B-204ENST00000507996 KIF3CO14782 793 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 ZBTB7BO15156 539 aaPredicted RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 EPB41L2O43491 1005 aaKnown RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 CAPN15O75808 1086 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 VPS72Q15906 364 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 SARM1Q6SZW1 724 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 RBM43Q6ZSC3 357 aaKnown RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 CCDC186Q7Z3E2 898 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 FILIP1Q7Z7B0 1213 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 GTF3C6Q969F1 213 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 PHAXQ9H814 394 aaKnown RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 RBM28Q9NW13 759 aaKnown RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 BABAM1Q9NWV8 329 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 THRAP3Q9Y2W1 955 aaKnown RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 ZNF330Q9Y3S2 320 aaPredicted RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 BCL9LQ86UU0 1499 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 PARP4Q9UKK3 1724 aaKnown RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 GIGYF1O75420 1035 aaPredicted RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 ACTN2P35609 894 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 PTPN14Q15678 1187 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 CASC1Q6TDU7 716 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 MMS22LQ6ZRQ5 1243 aa7.18□□□□□ -1.26
KDM3B-204ENST00000507996 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 QTRT2Q9H974 415 aaKnown RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 ARGLU1Q9NWB6 273 aaPredicted RBP7.18□□□□□ -1.26
KDM3B-204ENST00000507996 ERVV-2B6SEH9 535 aa7.17□□□□□ -1.26
KDM3B-204ENST00000507996 TPM1P09493 284 aa7.17□□□□□ -1.26
KDM3B-204ENST00000507996 CORO7P57737 925 aa7.17□□□□□ -1.26
KDM3B-204ENST00000507996 ST5P78524 1137 aa7.17□□□□□ -1.26
KDM3B-204ENST00000507996 C11orf91Q3C1V1 193 aa7.17□□□□□ -1.26
KDM3B-204ENST00000507996 MARCH10Q8NA82 808 aaPredicted RBP7.17□□□□□ -1.26
KDM3B-204ENST00000507996 SPC24Q8NBT2 197 aa7.17□□□□□ -1.26
KDM3B-204ENST00000507996 PIGBQ92521 554 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms