RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 POTECB2RU33 542 aa9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 SASH3O75995 380 aa9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 SSBP05455 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 XRCC5P13010 732 aaKnown RBP9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 KRT25Q7Z3Z0 450 aa9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 GAS2L1Q99501 681 aaPredicted RBP9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 OSBPL2Q9H1P3 480 aa9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 PPM1HQ9ULR3 514 aa9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 AKAP2Q9Y2D5 859 aa9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
AP001960.1-201ENST00000506494 RLBP1P12271 317 aa9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 GBP2P32456 591 aaPredicted RBP9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 CCINQ13939 588 aa9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 DTHD1Q6ZMT9 781 aa9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 CKAP2LQ8IYA6 745 aa9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 PNMA5Q96PV4 448 aa9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 OXCT2Q9BYC2 517 aaPredicted RBP9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 ZCCHC2Q9C0B9 1178 aaKnown RBP9.21□□□□□ -0.94
AP001960.1-201ENST00000506494 TLDC2A0PJX2 215 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 MINDY4BA8MYZ0 360 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 CYP2E1P05181 493 aaPredicted RBP9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 RARAP10276 462 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 PRPF40BQ6NWY9 871 aaKnown RBP9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 FIGNL1Q6PIW4 674 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 GLIS3Q8NEA6 775 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 SEC16BQ96JE7 1060 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 LIN7BQ9HAP6 207 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 ZFYVE1Q9HBF4 777 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 LATS2Q9NRM7 1088 aa9.2□□□□□ -0.94
AP001960.1-201ENST00000506494 KCNQ4P56696 695 aa9.19□□□□□ -0.94
AP001960.1-201ENST00000506494 LAPTM4AQ15012 233 aa9.19□□□□□ -0.94
AP001960.1-201ENST00000506494 NCAPG2Q86XI2 1143 aa9.19□□□□□ -0.94
AP001960.1-201ENST00000506494 C3orf58Q8NDZ4 430 aa9.19□□□□□ -0.94
AP001960.1-201ENST00000506494 OR13H1Q8NG92 308 aa9.19□□□□□ -0.94
AP001960.1-201ENST00000506494 TMEM238LA0A1B0GVL6 79 aa9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 MMP20O60882 483 aa9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 PSAPP07602 524 aa9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 TARSP26639 723 aaKnown RBP9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 EIF4A3P38919 411 aaKnown RBP9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 PEAR1Q5VY43 1037 aaPredicted RBP9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 TMEM74Q96NL1 305 aa9.18□□□□□ -0.94
AP001960.1-201ENST00000506494 F6X3S4 739 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 ATXN7O15265 892 aaPredicted RBP9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 FAM157BP0CG42 384 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 BMS1Q14692 1282 aaKnown RBP9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 LBRQ14739 615 aaKnown RBP9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 NFE2L2Q16236 605 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 MAP3K11Q16584 847 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 SV2BQ7L1I2 683 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 PIF1Q9H611 641 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 ADAMTS1Q9UHI8 967 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 SALL4Q9UJQ4 1053 aa9.17□□□□□ -0.94
AP001960.1-201ENST00000506494 NASPP49321 788 aaPredicted RBP9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 SFSWAPQ12872 951 aaKnown RBP9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 HYAL2Q12891 473 aa9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 ANKRD24Q8TF21 1146 aa9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 TRIM56Q9BRZ2 755 aaKnown RBP9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 GSX2Q9BZM3 304 aa9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 CEP44Q9C0F1 390 aa9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 ABCB6Q9NP58 842 aa9.16□□□□□ -0.94
AP001960.1-201ENST00000506494 KHNYNO15037 678 aaKnown RBP9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 FBXO24O75426 580 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 BMP1P13497 986 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 NBPF6Q5VWK0 638 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 TPTE2Q6XPS3 522 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 RIPOR1Q6ZS17 1223 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 ZNF296Q8WUU4 475 aaPredicted RBP9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 MRFAP1L1Q96HT8 127 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 NBPF4Q96M43 638 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 OSMRQ99650 979 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 STRIP2Q9ULQ0 834 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 EFR3BQ9Y2G0 817 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 PCDHGC4Q9Y5F7 938 aa9.15□□□□□ -0.94
AP001960.1-201ENST00000506494 DCDC2BA2VCK2 349 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 NFKB1P19838 968 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 SDE2Q6IQ49 451 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 ANKRD13AQ8IZ07 590 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 CPLX3Q8WVH0 158 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 SPACA7Q96KW9 195 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 ZKSCAN3Q9BRR0 538 aa9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 SUPT16HQ9Y5B9 1047 aaKnown RBP9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.14□□□□□ -0.95
AP001960.1-201ENST00000506494 SOX18P35713 384 aa9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 PLAURQ03405 335 aa9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 LAMC2Q13753 1193 aa9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 COL9A2Q14055 689 aaPredicted RBP9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 SNAP47Q5SQN1 464 aa9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 CCNJLQ8IV13 435 aa9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
AP001960.1-201ENST00000506494 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 U2SURPO15042 1029 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms