RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 CASP8AP2Q9UKL3 1982 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 RTL9Q8NET4 1388 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 PSMD14O00487 310 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 GPSM2P81274 684 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 SF3B3Q15393 1217 aaKnown RBP7.64□□□□□ -1.19
GYPB-205ENST00000505583 DOK7Q18PE1 504 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 DUSP27Q5VZP5 1158 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 USP48Q86UV5 1035 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 MICALL2Q8IY33 904 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 JARID2Q92833 1246 aaPredicted RBP7.64□□□□□ -1.19
GYPB-205ENST00000505583 RUNDC1Q96C34 613 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 BCL2L13Q9BXK5 485 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 PHAXQ9H814 394 aaKnown RBP7.64□□□□□ -1.19
GYPB-205ENST00000505583 ZNF408Q9H9D4 720 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 MBIPQ9NS73 344 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 NSFL1CQ9UNZ2 370 aaKnown RBP7.64□□□□□ -1.19
GYPB-205ENST00000505583 SPEF2Q9C093 1822 aa7.64□□□□□ -1.19
GYPB-205ENST00000505583 ASTN2O75129 1339 aaPredicted RBP7.63□□□□□ -1.19
GYPB-205ENST00000505583 CDHR2Q9BYE9 1310 aa7.63□□□□□ -1.19
GYPB-205ENST00000505583 WTIPA6NIX2 430 aaPredicted RBP7.63□□□□□ -1.19
GYPB-205ENST00000505583 ELL2O00472 640 aaPredicted RBP7.63□□□□□ -1.19
GYPB-205ENST00000505583 ZNF853P0CG23 659 aa7.63□□□□□ -1.19
GYPB-205ENST00000505583 ECE1P42892 770 aa7.63□□□□□ -1.19
GYPB-205ENST00000505583 TNIP1Q15025 636 aa7.63□□□□□ -1.19
GYPB-205ENST00000505583 TBC1D10BQ4KMP7 808 aaPredicted RBP7.63□□□□□ -1.19
GYPB-205ENST00000505583 SEC31BQ9NQW1 1179 aa7.63□□□□□ -1.19
GYPB-205ENST00000505583 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
GYPB-205ENST00000505583 ZNF646O15015 1829 aaPredicted RBP7.63□□□□□ -1.19
GYPB-205ENST00000505583 PSME4Q14997 1843 aa7.63□□□□□ -1.19
GYPB-205ENST00000505583 ADM5C9JUS6 153 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 C6orf229H3BNL8 230 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 PITPNM1O00562 1244 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 IRS4O14654 1257 aaPredicted RBP7.62□□□□□ -1.19
GYPB-205ENST00000505583 ECE2O60344 883 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 HOXB7P09629 217 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 MAP2K2P36507 400 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 WASHC4Q2M389 1173 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 RBM26Q5T8P6 1007 aaKnown RBP7.62□□□□□ -1.19
GYPB-205ENST00000505583 CDC37L1Q7L3B6 337 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 TMC4Q7Z404 712 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 SPDYE1Q8NFV5 336 aaPredicted RBP7.62□□□□□ -1.19
GYPB-205ENST00000505583 TBC1D16Q8TBP0 767 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 ZC3H15Q8WU90 426 aaKnown RBP7.62□□□□□ -1.19
GYPB-205ENST00000505583 CFAP44Q96MT7 982 aa7.62□□□□□ -1.19
GYPB-205ENST00000505583 FAM155AB1AL88 458 aaPredicted RBP7.61□□□□□ -1.19
GYPB-205ENST00000505583 H7C1D1 291 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 APAF1O14727 1248 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 RPS8P62241 208 aaKnown RBP7.61□□□□□ -1.19
GYPB-205ENST00000505583 TRIM28Q13263 835 aaKnown RBP7.61□□□□□ -1.19
GYPB-205ENST00000505583 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
GYPB-205ENST00000505583 FAM161AQ3B820 660 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 C8orf58Q8NAV2 365 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 DPF2Q92785 391 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 HHIPL1Q96JK4 782 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 CCDC85AQ96PX6 553 aaPredicted RBP7.61□□□□□ -1.19
GYPB-205ENST00000505583 BEGAINQ9BUH8 593 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 HYPKQ9NX55 129 aa7.61□□□□□ -1.19
GYPB-205ENST00000505583 CCDC85CA6NKD9 419 aa7.6□□□□□ -1.19
GYPB-205ENST00000505583 BRPF1P55201 1214 aaPredicted RBP7.6□□□□□ -1.19
GYPB-205ENST00000505583 HUNKP57058 714 aa7.6□□□□□ -1.19
GYPB-205ENST00000505583 KRT26Q7Z3Y9 468 aa7.6□□□□□ -1.19
GYPB-205ENST00000505583 RIC3Q7Z5B4 369 aa7.6□□□□□ -1.19
GYPB-205ENST00000505583 TSPYL6Q8N831 410 aa7.6□□□□□ -1.19
GYPB-205ENST00000505583 ZBTB38Q8NAP3 1195 aaPredicted RBP7.6□□□□□ -1.19
GYPB-205ENST00000505583 MYD88Q99836 296 aa7.6□□□□□ -1.19
GYPB-205ENST00000505583 SCAF8Q9UPN6 1271 aaKnown RBP7.6□□□□□ -1.19
GYPB-205ENST00000505583 MYH3P11055 1940 aa7.6□□□□□ -1.19
GYPB-205ENST00000505583 UFL1O94874 794 aa7.59□□□□□ -1.19
GYPB-205ENST00000505583 VIL1P09327 827 aaKnown RBP7.59□□□□□ -1.19
GYPB-205ENST00000505583 CCDC184Q52MB2 194 aa7.59□□□□□ -1.19
GYPB-205ENST00000505583 MCOLN1Q9GZU1 580 aa7.59□□□□□ -1.19
GYPB-205ENST00000505583 PRKRIP1Q9H875 184 aaPredicted RBP7.59□□□□□ -1.19
GYPB-205ENST00000505583 PODXL2Q9NZ53 605 aa7.59□□□□□ -1.19
GYPB-205ENST00000505583 AKAP11Q9UKA4 1901 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 PCCAP05165 728 aaPredicted RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 IGKV5-2P06315 115 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 RPS12P25398 132 aaKnown RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 KIF23Q02241 960 aaPredicted RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 GOLGA2Q08379 1002 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 NOGQ13253 232 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 RGMBQ6NW40 437 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 PIP4P2Q8N4L2 257 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 DCPSQ96C86 337 aaKnown RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 GMLQ99445 158 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 EYA3Q99504 573 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 METTL22Q9BUU2 404 aaPredicted RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 MXD3Q9BW11 206 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 GBA2Q9HCG7 927 aaPredicted RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 IFT57Q9NWB7 429 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 GGA3Q9NZ52 723 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 ANKIB1Q9P2G1 1089 aa7.58□□□□□ -1.2
GYPB-205ENST00000505583 ZBTB47Q9UFB7 747 aaPredicted RBP7.58□□□□□ -1.2
GYPB-205ENST00000505583 CA12O43570 354 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 PDE8AO60658 829 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 RGS19P49795 217 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 FXR2P51116 673 aaKnown RBP eCLIP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms