RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 POLD1P28340 1107 aa29.82■■■□□ 2.36
DHFR-203ENST00000505337 ARAP2Q8WZ64 1704 aa29.82■■■□□ 2.36
DHFR-203ENST00000505337 CCDC57Q2TAC2 916 aa29.82■■■□□ 2.36
DHFR-203ENST00000505337 TRAPPC3LQ5T215 181 aa29.82■■■□□ 2.36
DHFR-203ENST00000505337 SNRKQ9NRH2 765 aa29.82■■■□□ 2.36
DHFR-203ENST00000505337 RIC1Q4ADV7 1423 aa29.81■■■□□ 2.36
DHFR-203ENST00000505337 ARHGEF1Q92888 912 aaKnown RBP29.81■■■□□ 2.36
DHFR-203ENST00000505337 CIZ1Q9ULV3 898 aaPredicted RBP29.81■■■□□ 2.36
DHFR-203ENST00000505337 SYNE4Q8N205 404 aa29.8■■■□□ 2.36
DHFR-203ENST00000505337 FHDC1Q9C0D6 1143 aaPredicted RBP29.8■■■□□ 2.36
DHFR-203ENST00000505337 ADRA2BP18089 450 aa29.79■■■□□ 2.36
DHFR-203ENST00000505337 PUS3Q9BZE2 481 aaKnown RBP29.79■■■□□ 2.36
DHFR-203ENST00000505337 MYH7P12883 1935 aa29.79■■■□□ 2.36
DHFR-203ENST00000505337 CTSWP56202 376 aa29.79■■■□□ 2.36
DHFR-203ENST00000505337 MED23Q9ULK4 1368 aa29.79■■■□□ 2.36
DHFR-203ENST00000505337 CAMTA2O94983 1202 aa29.78■■■□□ 2.36
DHFR-203ENST00000505337 FSD1Q9BTV5 496 aa29.78■■■□□ 2.36
DHFR-203ENST00000505337 KIAA1211Q6ZU35 1233 aa29.77■■■□□ 2.36
DHFR-203ENST00000505337 TTLL11Q8NHH1 800 aa29.77■■■□□ 2.36
DHFR-203ENST00000505337 HAUS7Q99871 368 aa29.77■■■□□ 2.36
DHFR-203ENST00000505337 SYT17Q9BSW7 474 aa29.77■■■□□ 2.36
DHFR-203ENST00000505337 TRMT112Q9UI30 125 aaKnown RBP29.77■■■□□ 2.36
DHFR-203ENST00000505337 IRS4O14654 1257 aaPredicted RBP29.76■■■□□ 2.36
DHFR-203ENST00000505337 NMIQ13287 307 aaPredicted RBP29.76■■■□□ 2.36
DHFR-203ENST00000505337 IFIT5Q13325 482 aaKnown RBP29.76■■■□□ 2.35
DHFR-203ENST00000505337 IL27Q8NEV9 243 aa29.76■■■□□ 2.35
DHFR-203ENST00000505337 HSP90AA1P07900 732 aaKnown RBP29.75■■■□□ 2.35
DHFR-203ENST00000505337 FAM227BQ96M60 508 aa29.75■■■□□ 2.35
DHFR-203ENST00000505337 CCDC171Q6TFL3 1326 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 NEK4P51957 841 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 EDC3Q96F86 508 aaKnown RBP29.74■■■□□ 2.35
DHFR-203ENST00000505337 C4AP0C0L4 1744 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 AKAP11Q9UKA4 1901 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 A0A0D9SFI3 127 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 A0A1B0GUL7 405 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 PDE8AO60658 829 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 GREM2Q9H772 168 aa29.74■■■□□ 2.35
DHFR-203ENST00000505337 RFC4P35249 363 aa29.73■■■□□ 2.35
DHFR-203ENST00000505337 CCDC85AQ96PX6 553 aaPredicted RBP29.73■■■□□ 2.35
DHFR-203ENST00000505337 SNX14Q9Y5W7 946 aa29.73■■■□□ 2.35
DHFR-203ENST00000505337 A0A1B0GUL6 1792 aa29.72■■■□□ 2.35
DHFR-203ENST00000505337 MCM2P49736 904 aa29.72■■■□□ 2.35
DHFR-203ENST00000505337 PTH1RQ03431 593 aa29.72■■■□□ 2.35
DHFR-203ENST00000505337 CEP126Q9P2H0 1117 aa29.72■■■□□ 2.35
DHFR-203ENST00000505337 ITGA6P23229 1130 aa29.71■■■□□ 2.35
DHFR-203ENST00000505337 TIMM10P62072 90 aa29.71■■■□□ 2.35
DHFR-203ENST00000505337 NEUROD6Q96NK8 337 aa29.71■■■□□ 2.35
DHFR-203ENST00000505337 GYS1P13807 737 aa29.71■■■□□ 2.35
DHFR-203ENST00000505337 TAF7LQ5H9L4 462 aa29.71■■■□□ 2.35
DHFR-203ENST00000505337 KCNB2Q92953 911 aa29.71■■■□□ 2.35
DHFR-203ENST00000505337 PARP10Q53GL7 1025 aa29.7■■■□□ 2.34
DHFR-203ENST00000505337 SUSD4Q5VX71 490 aa29.7■■■□□ 2.34
DHFR-203ENST00000505337 FOXD4L1Q9NU39 408 aa29.7■■■□□ 2.34
DHFR-203ENST00000505337 SH3TC1Q8TE82 1336 aa29.69■■■□□ 2.34
DHFR-203ENST00000505337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.69■■■□□ 2.34
DHFR-203ENST00000505337 DNAJC2Q99543 621 aaKnown RBP29.69■■■□□ 2.34
DHFR-203ENST00000505337 SRP68Q9UHB9 627 aaKnown RBP29.69■■■□□ 2.34
DHFR-203ENST00000505337 AKAP2Q9Y2D5 859 aa29.69■■■□□ 2.34
DHFR-203ENST00000505337 ANKRD18BA2A2Z9 1011 aa29.68■■■□□ 2.34
DHFR-203ENST00000505337 RAB3GAP1Q15042 981 aa29.68■■■□□ 2.34
DHFR-203ENST00000505337 RASEFQ8IZ41 740 aa29.68■■■□□ 2.34
DHFR-203ENST00000505337 RIPOR2Q9Y4F9 1068 aa29.68■■■□□ 2.34
DHFR-203ENST00000505337 NDUFB9Q9Y6M9 179 aa29.68■■■□□ 2.34
DHFR-203ENST00000505337 ABCC12Q96J65 1359 aa29.68■■■□□ 2.34
DHFR-203ENST00000505337 TICAM2Q86XR7 235 aa29.68■■■□□ 2.34
DHFR-203ENST00000505337 KLHL34Q8N239 644 aa29.67■■■□□ 2.34
DHFR-203ENST00000505337 NLGN1Q8N2Q7 840 aa29.67■■■□□ 2.34
DHFR-203ENST00000505337 KBTBD3Q8NAB2 608 aa29.67■■■□□ 2.34
DHFR-203ENST00000505337 UPF3BQ9BZI7 483 aaKnown RBP29.67■■■□□ 2.34
DHFR-203ENST00000505337 NECTIN1Q15223 517 aa29.66■■■□□ 2.34
DHFR-203ENST00000505337 MAP4K1Q92918 833 aa29.66■■■□□ 2.34
DHFR-203ENST00000505337 UTP14AQ9BVJ6 771 aaKnown RBP29.66■■■□□ 2.34
DHFR-203ENST00000505337 NTSR2O95665 410 aa29.65■■■□□ 2.34
DHFR-203ENST00000505337 UTRNP46939 3433 aa29.65■■■□□ 2.34
DHFR-203ENST00000505337 MMP10P09238 476 aa29.65■■■□□ 2.34
DHFR-203ENST00000505337 DDX46Q7L014 1031 aaKnown RBP29.65■■■□□ 2.34
DHFR-203ENST00000505337 ZNF589Q86UQ0 364 aaPredicted RBP29.65■■■□□ 2.34
DHFR-203ENST00000505337 VGLL2Q8N8G2 317 aa29.65■■■□□ 2.34
DHFR-203ENST00000505337 TMX3Q96JJ7 454 aa29.65■■■□□ 2.34
DHFR-203ENST00000505337 PAG1Q9NWQ8 432 aa29.65■■■□□ 2.34
DHFR-203ENST00000505337 ZNF652Q9Y2D9 606 aa29.65■■■□□ 2.34
DHFR-203ENST00000505337 RGL2O15211 777 aa29.64■■■□□ 2.34
DHFR-203ENST00000505337 RBM8AQ9Y5S9 174 aaKnown RBP29.64■■■□□ 2.34
DHFR-203ENST00000505337 RTL9Q8NET4 1388 aa29.64■■■□□ 2.33
DHFR-203ENST00000505337 MYO5AQ9Y4I1 1855 aaKnown RBP29.63■■■□□ 2.33
DHFR-203ENST00000505337 CLEC4GQ6UXB4 293 aa29.63■■■□□ 2.33
DHFR-203ENST00000505337 LDHAL6AQ6ZMR3 332 aa29.63■■■□□ 2.33
DHFR-203ENST00000505337 NLGN2Q8NFZ4 835 aa29.63■■■□□ 2.33
DHFR-203ENST00000505337 TTC14Q96N46 770 aa29.63■■■□□ 2.33
DHFR-203ENST00000505337 LAMA4Q16363 1823 aa29.62■■■□□ 2.33
DHFR-203ENST00000505337 CUL4AQ13619 759 aa29.62■■■□□ 2.33
DHFR-203ENST00000505337 XAGE2Q96GT9 111 aa29.62■■■□□ 2.33
DHFR-203ENST00000505337 NIP7Q9Y221 180 aaKnown RBP eCLIP29.62■■■□□ 2.331e-7■■□□□ 13.5
DHFR-203ENST00000505337 IFIT1P09914 478 aaKnown RBP29.62■■■□□ 2.33
DHFR-203ENST00000505337 ADORA1P30542 326 aa29.62■■■□□ 2.33
DHFR-203ENST00000505337 MCM4P33991 863 aa29.62■■■□□ 2.33
DHFR-203ENST00000505337 USPL1Q5W0Q7 1092 aa29.62■■■□□ 2.33
DHFR-203ENST00000505337 PRPF40BQ6NWY9 871 aaKnown RBP29.62■■■□□ 2.33
DHFR-203ENST00000505337 CWC22Q9HCG8 908 aaKnown RBP29.62■■■□□ 2.33
DHFR-203ENST00000505337 METTL24Q5JXM2 366 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms