RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CDC5LQ99459 802 aaKnown RBP25.59■■□□□ 1.69
UBE2D3-220ENST00000505307 WDR33Q9C0J8 1336 aaKnown RBP25.59■■□□□ 1.69
UBE2D3-220ENST00000505307 TRAF5O00463 557 aa25.58■■□□□ 1.69
UBE2D3-220ENST00000505307 CTSWP56202 376 aa25.58■■□□□ 1.69
UBE2D3-220ENST00000505307 CST9Q5W186 159 aa25.58■■□□□ 1.69
UBE2D3-220ENST00000505307 JARID2Q92833 1246 aaPredicted RBP25.58■■□□□ 1.69
UBE2D3-220ENST00000505307 WBP1LQ9NX94 342 aa25.58■■□□□ 1.69
UBE2D3-220ENST00000505307 G3V3G9 751 aa25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 UFL1O94874 794 aa25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 CTCFP49711 727 aaPredicted RBP25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 HIRAP54198 1017 aaPredicted RBP25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 MAP2K1Q02750 393 aaPredicted RBP25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 DCAF8Q5TAQ9 597 aa25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 CDC37L1Q7L3B6 337 aa25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 COL4A1P02462 1669 aa25.57■■□□□ 1.68
UBE2D3-220ENST00000505307 TRPM7Q96QT4 1865 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 NEURL1BA8MQ27 555 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 FOXN1O15353 648 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 FMR1Q06787 632 aaKnown RBP eCLIP25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 DOK7Q18PE1 504 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 TRPM4Q8TD43 1214 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 PRDM10Q9NQV6 1147 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 ZBTB12Q9Y330 459 aaPredicted RBP25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 TLL2Q9Y6L7 1015 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 XDHP47989 1333 aa25.56■■□□□ 1.68
UBE2D3-220ENST00000505307 TTLL11Q8NHH1 800 aa25.55■■□□□ 1.68
UBE2D3-220ENST00000505307 CCDC85AQ96PX6 553 aaPredicted RBP25.55■■□□□ 1.68
UBE2D3-220ENST00000505307 GLIS2Q9BZE0 524 aaPredicted RBP25.55■■□□□ 1.68
UBE2D3-220ENST00000505307 FANCIQ9NVI1 1328 aa25.55■■□□□ 1.68
UBE2D3-220ENST00000505307 ATP2B4P23634 1241 aa25.54■■□□□ 1.68
UBE2D3-220ENST00000505307 FLIIQ13045 1269 aa25.54■■□□□ 1.68
UBE2D3-220ENST00000505307 G2E3Q7L622 706 aa25.54■■□□□ 1.68
UBE2D3-220ENST00000505307 CAPNS2Q96L46 248 aa25.54■■□□□ 1.68
UBE2D3-220ENST00000505307 RTL9Q8NET4 1388 aa25.54■■□□□ 1.68
UBE2D3-220ENST00000505307 H7C1W4 665 aa25.53■■□□□ 1.68
UBE2D3-220ENST00000505307 CELF2O95319 508 aaKnown RBP25.53■■□□□ 1.68
UBE2D3-220ENST00000505307 VIL1P09327 827 aaKnown RBP25.53■■□□□ 1.68
UBE2D3-220ENST00000505307 CWF19L2Q2TBE0 894 aaKnown RBP25.53■■□□□ 1.68
UBE2D3-220ENST00000505307 HHIPL1Q96JK4 782 aa25.53■■□□□ 1.68
UBE2D3-220ENST00000505307 BSDC1Q9NW68 430 aaPredicted RBP25.53■■□□□ 1.68
UBE2D3-220ENST00000505307 PAXIP1Q6ZW49 1069 aaPredicted RBP25.52■■□□□ 1.68
UBE2D3-220ENST00000505307 GPR101Q96P66 508 aaPredicted RBP25.52■■□□□ 1.68
UBE2D3-220ENST00000505307 MYH16Q9H6N6 1097 aa25.52■■□□□ 1.68
UBE2D3-220ENST00000505307 SHTN1A0MZ66 631 aa25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 VAMP4O75379 141 aa25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 FKBP5Q13451 457 aaPredicted RBP25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 SAMD7Q7Z3H4 446 aa25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 SAPCD2Q86UD0 394 aa25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 DNAAF4Q8WXU2 420 aa25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 PLA2G12BQ9BX93 195 aa25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 KCNQ5Q9NR82 932 aa25.51■■□□□ 1.67
UBE2D3-220ENST00000505307 GCKRQ14397 625 aa25.5■■□□□ 1.67
UBE2D3-220ENST00000505307 UBE3BQ7Z3V4 1068 aa25.5■■□□□ 1.67
UBE2D3-220ENST00000505307 LINS1Q8NG48 757 aa25.5■■□□□ 1.67
UBE2D3-220ENST00000505307 GREM2Q9H772 168 aa25.5■■□□□ 1.67
UBE2D3-220ENST00000505307 CACNA1FO60840 1977 aa25.49■■□□□ 1.67
UBE2D3-220ENST00000505307 ZNF609O15014 1411 aa25.49■■□□□ 1.67
UBE2D3-220ENST00000505307 MAP2K2P36507 400 aa25.49■■□□□ 1.67
UBE2D3-220ENST00000505307 TBC1D10BQ4KMP7 808 aaPredicted RBP25.49■■□□□ 1.67
UBE2D3-220ENST00000505307 PODNQ7Z5L7 613 aa25.49■■□□□ 1.67
UBE2D3-220ENST00000505307 AGBL3Q8NEM8 1001 aa25.49■■□□□ 1.67
UBE2D3-220ENST00000505307 SALL2Q9Y467 1007 aaPredicted RBP25.49■■□□□ 1.67
UBE2D3-220ENST00000505307 GRM1Q13255 1194 aa25.48■■□□□ 1.67
UBE2D3-220ENST00000505307 CYP4F22Q6NT55 531 aa25.48■■□□□ 1.67
UBE2D3-220ENST00000505307 DCPSQ96C86 337 aaKnown RBP25.48■■□□□ 1.67
UBE2D3-220ENST00000505307 BEGAINQ9BUH8 593 aa25.48■■□□□ 1.67
UBE2D3-220ENST00000505307 MINPP1Q9UNW1 487 aa25.48■■□□□ 1.67
UBE2D3-220ENST00000505307 EXOSC9Q06265 439 aaKnown RBP25.47■■□□□ 1.67
UBE2D3-220ENST00000505307 USP48Q86UV5 1035 aa25.47■■□□□ 1.67
UBE2D3-220ENST00000505307 MYH3P11055 1940 aa25.46■■□□□ 1.67
UBE2D3-220ENST00000505307 IGHMBP2P38935 993 aaKnown RBP25.46■■□□□ 1.67
UBE2D3-220ENST00000505307 KIF4BQ2VIQ3 1234 aa25.46■■□□□ 1.67
UBE2D3-220ENST00000505307 RSBN1LQ6PCB5 846 aaPredicted RBP25.46■■□□□ 1.67
UBE2D3-220ENST00000505307 KRT26Q7Z3Y9 468 aa25.46■■□□□ 1.67
UBE2D3-220ENST00000505307 ZNF408Q9H9D4 720 aa25.46■■□□□ 1.67
UBE2D3-220ENST00000505307 MED23Q9ULK4 1368 aa25.45■■□□□ 1.67
UBE2D3-220ENST00000505307 RBM26Q5T8P6 1007 aaKnown RBP25.45■■□□□ 1.66
UBE2D3-220ENST00000505307 THSD7BQ9C0I4 1608 aa25.45■■□□□ 1.66
UBE2D3-220ENST00000505307 USP17L3A6NCW0 530 aa25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 USP17L4A6NCW7 530 aa25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 CCT4P50991 539 aaKnown RBP25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 LBX1P52954 281 aa25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 CASP7P55210 303 aa25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 ZNF280AP59817 542 aaPredicted RBP25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 USP17L1Q7RTZ2 530 aa25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 LEMD3Q9Y2U8 911 aa25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 SCN9AQ15858 1988 aa25.44■■□□□ 1.66
UBE2D3-220ENST00000505307 EGFRP00533 1210 aa25.43■■□□□ 1.66
UBE2D3-220ENST00000505307 CSF1RP07333 972 aa25.43■■□□□ 1.66
UBE2D3-220ENST00000505307 HSPA8P11142 646 aaKnown RBP25.43■■□□□ 1.66
UBE2D3-220ENST00000505307 ANKRD2Q9GZV1 360 aa25.43■■□□□ 1.66
UBE2D3-220ENST00000505307 ITGA6P23229 1130 aa25.42■■□□□ 1.66
UBE2D3-220ENST00000505307 SULF1Q8IWU6 871 aa25.42■■□□□ 1.66
UBE2D3-220ENST00000505307 FAM9BQ8IZU0 186 aa25.42■■□□□ 1.66
UBE2D3-220ENST00000505307 MPHOSPH8Q99549 860 aa25.42■■□□□ 1.66
UBE2D3-220ENST00000505307 USP17L8P0C7I0 530 aa25.41■■□□□ 1.66
UBE2D3-220ENST00000505307 GMLQ99445 158 aa25.41■■□□□ 1.66
UBE2D3-220ENST00000505307 COA1Q9GZY4 146 aa25.41■■□□□ 1.66
UBE2D3-220ENST00000505307 C2orf69Q8N8R5 385 aa25.4■■□□□ 1.66
UBE2D3-220ENST00000505307 CA12O43570 354 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms