RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 EYA3Q99504 573 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 SRCIN1Q9C0H9 1055 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 GGA1Q9UJY5 639 aa18.07■□□□□ 0.48
HOXC9-202ENST00000504557 SCN9AQ15858 1988 aa18.06■□□□□ 0.48
HOXC9-202ENST00000504557 YDJCA8MPS7 323 aa18.06■□□□□ 0.48
HOXC9-202ENST00000504557 ITGA6P23229 1130 aa18.06■□□□□ 0.48
HOXC9-202ENST00000504557 IGHMBP2P38935 993 aaKnown RBP18.06■□□□□ 0.48
HOXC9-202ENST00000504557 GRM8O00222 908 aa18.05■□□□□ 0.48
HOXC9-202ENST00000504557 ECE2O60344 883 aa18.05■□□□□ 0.48
HOXC9-202ENST00000504557 GMPSP49915 693 aaPredicted RBP18.05■□□□□ 0.48
HOXC9-202ENST00000504557 SCNN1DP51172 638 aa18.05■□□□□ 0.48
HOXC9-202ENST00000504557 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
HOXC9-202ENST00000504557 LDHDQ86WU2 507 aa18.05■□□□□ 0.48
HOXC9-202ENST00000504557 ZC3H12CQ9C0D7 883 aaKnown RBP18.05■□□□□ 0.48
HOXC9-202ENST00000504557 CEP350Q5VT06 3117 aa18.05■□□□□ 0.48
HOXC9-202ENST00000504557 XDHP47989 1333 aa18.04■□□□□ 0.48
HOXC9-202ENST00000504557 WTIPA6NIX2 430 aaPredicted RBP18.04■□□□□ 0.48
HOXC9-202ENST00000504557 TNIP1Q15025 636 aa18.04■□□□□ 0.48
HOXC9-202ENST00000504557 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
HOXC9-202ENST00000504557 PLA2G12BQ9BX93 195 aa18.04■□□□□ 0.48
HOXC9-202ENST00000504557 KCNQ5Q9NR82 932 aa18.04■□□□□ 0.48
HOXC9-202ENST00000504557 ANKRD18BA2A2Z9 1011 aa18.03■□□□□ 0.48
HOXC9-202ENST00000504557 ALDH1L1O75891 902 aa18.03■□□□□ 0.48
HOXC9-202ENST00000504557 MAP1SQ66K74 1059 aaPredicted RBP18.03■□□□□ 0.48
HOXC9-202ENST00000504557 LMBR1LQ6UX01 489 aa18.03■□□□□ 0.48
HOXC9-202ENST00000504557 PNMA8AQ86V59 439 aaPredicted RBP18.03■□□□□ 0.48
HOXC9-202ENST00000504557 BSDC1Q9NW68 430 aaPredicted RBP18.03■□□□□ 0.48
HOXC9-202ENST00000504557 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
HOXC9-202ENST00000504557 MINPP1Q9UNW1 487 aa18.03■□□□□ 0.48
HOXC9-202ENST00000504557 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
HOXC9-202ENST00000504557 ADAMTSL1Q8N6G6 1762 aa18.03■□□□□ 0.48
HOXC9-202ENST00000504557 RTL9Q8NET4 1388 aa18.03■□□□□ 0.48
HOXC9-202ENST00000504557 A0A1B0GUL6 1792 aa18.02■□□□□ 0.48
HOXC9-202ENST00000504557 SHTN1A0MZ66 631 aa18.02■□□□□ 0.48
HOXC9-202ENST00000504557 PSMD14O00487 310 aa18.02■□□□□ 0.48
HOXC9-202ENST00000504557 FOXO4P98177 505 aa18.02■□□□□ 0.48
HOXC9-202ENST00000504557 TAF7LQ5H9L4 462 aa18.02■□□□□ 0.48
HOXC9-202ENST00000504557 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.48
HOXC9-202ENST00000504557 TRMT2AQ8IZ69 625 aaKnown RBP18.02■□□□□ 0.48
HOXC9-202ENST00000504557 GPRC5DQ9NZD1 345 aa18.02■□□□□ 0.48
HOXC9-202ENST00000504557 PTPRCP08575 1304 aa18.01■□□□□ 0.47
HOXC9-202ENST00000504557 CSF1RP07333 972 aa18.01■□□□□ 0.47
HOXC9-202ENST00000504557 ATP2B4P23634 1241 aa18.01■□□□□ 0.47
HOXC9-202ENST00000504557 IFIT5Q13325 482 aaKnown RBP18.01■□□□□ 0.47
HOXC9-202ENST00000504557 POLR2AP24928 1970 aaKnown RBP18■□□□□ 0.47
HOXC9-202ENST00000504557 PSME4Q14997 1843 aa18■□□□□ 0.47
HOXC9-202ENST00000504557 NBPF7P0C2Y1 421 aaPredicted RBP18■□□□□ 0.47
HOXC9-202ENST00000504557 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
HOXC9-202ENST00000504557 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
HOXC9-202ENST00000504557 FBXW7Q969H0 707 aa18■□□□□ 0.47
HOXC9-202ENST00000504557 SUCLG2Q96I99 432 aa18■□□□□ 0.47
HOXC9-202ENST00000504557 ZNF594Q96JF6 807 aaPredicted RBP18■□□□□ 0.47
HOXC9-202ENST00000504557 KCNJ4P48050 445 aa17.99■□□□□ 0.47
HOXC9-202ENST00000504557 CCT4P50991 539 aaKnown RBP17.99■□□□□ 0.47
HOXC9-202ENST00000504557 CCDC57Q2TAC2 916 aa17.99■□□□□ 0.47
HOXC9-202ENST00000504557 CNOT7Q9UIV1 285 aaKnown RBP17.99■□□□□ 0.47
HOXC9-202ENST00000504557 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
HOXC9-202ENST00000504557 PLIN1O60240 522 aa17.98■□□□□ 0.47
HOXC9-202ENST00000504557 CHRNDQ07001 517 aa17.98■□□□□ 0.47
HOXC9-202ENST00000504557 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
HOXC9-202ENST00000504557 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
HOXC9-202ENST00000504557 ADARB2Q9NS39 739 aaKnown RBP17.98■□□□□ 0.47
HOXC9-202ENST00000504557 TRPM7Q96QT4 1865 aa17.97■□□□□ 0.47
HOXC9-202ENST00000504557 TAF5LO75529 589 aa17.97■□□□□ 0.47
HOXC9-202ENST00000504557 RBM26Q5T8P6 1007 aaKnown RBP17.97■□□□□ 0.47
HOXC9-202ENST00000504557 USP50Q70EL3 339 aaPredicted RBP17.97■□□□□ 0.47
HOXC9-202ENST00000504557 H7C1D1 291 aa17.96■□□□□ 0.47
HOXC9-202ENST00000504557 SNAP23O00161 211 aa17.96■□□□□ 0.47
HOXC9-202ENST00000504557 KLRK1P26718 216 aa17.96■□□□□ 0.47
HOXC9-202ENST00000504557 FMR1Q06787 632 aaKnown RBP eCLIP17.96■□□□□ 0.47
HOXC9-202ENST00000504557 DNAJC5GQ8N7S2 189 aa17.96■□□□□ 0.47
HOXC9-202ENST00000504557 TRPM4Q8TD43 1214 aa17.96■□□□□ 0.47
HOXC9-202ENST00000504557 ANKRD2Q9GZV1 360 aa17.96■□□□□ 0.47
HOXC9-202ENST00000504557 BICC1Q9H694 974 aaKnown RBP17.96■□□□□ 0.47
HOXC9-202ENST00000504557 CNNM1Q9NRU3 951 aa17.96■□□□□ 0.47
HOXC9-202ENST00000504557 ZNF804BA4D1E1 1349 aa17.96■□□□□ 0.46
HOXC9-202ENST00000504557 ITGBL1O95965 494 aaPredicted RBP17.95■□□□□ 0.46
HOXC9-202ENST00000504557 CT47B1P0C2W7 299 aaPredicted RBP17.95■□□□□ 0.46
HOXC9-202ENST00000504557 TBC1D10BQ4KMP7 808 aaPredicted RBP17.95■□□□□ 0.46
HOXC9-202ENST00000504557 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
HOXC9-202ENST00000504557 SAMD7Q7Z3H4 446 aa17.95■□□□□ 0.46
HOXC9-202ENST00000504557 TXNRD3Q86VQ6 643 aa17.95■□□□□ 0.46
HOXC9-202ENST00000504557 KAZALD1Q96I82 304 aa17.95■□□□□ 0.46
HOXC9-202ENST00000504557 MED23Q9ULK4 1368 aa17.94■□□□□ 0.46
HOXC9-202ENST00000504557 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
HOXC9-202ENST00000504557 KLRG1Q96E93 195 aa17.94■□□□□ 0.46
HOXC9-202ENST00000504557 MKRN1Q9UHC7 482 aaKnown RBP17.94■□□□□ 0.46
HOXC9-202ENST00000504557 LEMD3Q9Y2U8 911 aa17.94■□□□□ 0.46
HOXC9-202ENST00000504557 PASKQ96RG2 1323 aa17.94■□□□□ 0.46
HOXC9-202ENST00000504557 TRAF5O00463 557 aa17.93■□□□□ 0.46
HOXC9-202ENST00000504557 HIRAP54198 1017 aaPredicted RBP17.93■□□□□ 0.46
HOXC9-202ENST00000504557 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
HOXC9-202ENST00000504557 MXD3Q9BW11 206 aa17.93■□□□□ 0.46
HOXC9-202ENST00000504557 USP44Q9H0E7 712 aa17.93■□□□□ 0.46
HOXC9-202ENST00000504557 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
HOXC9-202ENST00000504557 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
HOXC9-202ENST00000504557 EGFRP00533 1210 aa17.92■□□□□ 0.46
HOXC9-202ENST00000504557 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
HOXC9-202ENST00000504557 GLIS2Q9BZE0 524 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms