RNA–Protein interactions for RNA: ENST00000503868.5

PTCD2-207, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-207ENST00000503868 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTCD2-207ENST00000503868 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
PTCD2-207ENST00000503868 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
PTCD2-207ENST00000503868 A0A1B0GUL6 1792 aa16.61■□□□□ 0.25
PTCD2-207ENST00000503868 PDE8BO95263 885 aa16.6■□□□□ 0.25
PTCD2-207ENST00000503868 MMP10P09238 476 aa16.6■□□□□ 0.25
PTCD2-207ENST00000503868 METTL24Q5JXM2 366 aa16.6■□□□□ 0.25
PTCD2-207ENST00000503868 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
PTCD2-207ENST00000503868 DBNDD2Q9BQY9 259 aa16.6■□□□□ 0.25
PTCD2-207ENST00000503868 BSDC1Q9NW68 430 aaPredicted RBP16.6■□□□□ 0.25
PTCD2-207ENST00000503868 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
PTCD2-207ENST00000503868 ERC2O15083 957 aa16.59■□□□□ 0.25
PTCD2-207ENST00000503868 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
PTCD2-207ENST00000503868 ANKRD18AQ8IVF6 992 aa16.59■□□□□ 0.25
PTCD2-207ENST00000503868 GPATCH3Q96I76 525 aa16.59■□□□□ 0.25
PTCD2-207ENST00000503868 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
PTCD2-207ENST00000503868 RPS8P62241 208 aaKnown RBP16.59■□□□□ 0.25
PTCD2-207ENST00000503868 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
PTCD2-207ENST00000503868 ATP5JP18859 108 aa16.58■□□□□ 0.24
PTCD2-207ENST00000503868 FGFR2P21802 821 aa16.58■□□□□ 0.24
PTCD2-207ENST00000503868 MSL1Q68DK7 614 aa16.58■□□□□ 0.24
PTCD2-207ENST00000503868 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
PTCD2-207ENST00000503868 NEUROD6Q96NK8 337 aa16.58■□□□□ 0.24
PTCD2-207ENST00000503868 BRIP1Q9BX63 1249 aa16.58■□□□□ 0.24
PTCD2-207ENST00000503868 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
PTCD2-207ENST00000503868 SEC24BO95487 1268 aa16.57■□□□□ 0.24
PTCD2-207ENST00000503868 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
PTCD2-207ENST00000503868 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
PTCD2-207ENST00000503868 ARAP2Q8WZ64 1704 aa16.57■□□□□ 0.24
PTCD2-207ENST00000503868 CDC45O75419 566 aa16.56■□□□□ 0.24
PTCD2-207ENST00000503868 CHRNDQ07001 517 aa16.56■□□□□ 0.24
PTCD2-207ENST00000503868 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
PTCD2-207ENST00000503868 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
PTCD2-207ENST00000503868 GRAPQ13588 217 aa16.56■□□□□ 0.24
PTCD2-207ENST00000503868 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
PTCD2-207ENST00000503868 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
PTCD2-207ENST00000503868 GRAPLQ8TC17 118 aaPredicted RBP16.56■□□□□ 0.24
PTCD2-207ENST00000503868 XAGE2Q96GT9 111 aa16.56■□□□□ 0.24
PTCD2-207ENST00000503868 PUM3Q15397 648 aaKnown RBP16.55■□□□□ 0.24
PTCD2-207ENST00000503868 LPIN2Q92539 896 aa16.55■□□□□ 0.24
PTCD2-207ENST00000503868 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
PTCD2-207ENST00000503868 TRIM6-TRIM34B2RNG4 842 aa16.54■□□□□ 0.24
PTCD2-207ENST00000503868 TAF5LO75529 589 aa16.54■□□□□ 0.24
PTCD2-207ENST00000503868 ADORA1P30542 326 aa16.54■□□□□ 0.24
PTCD2-207ENST00000503868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTCD2-207ENST00000503868 CRAMP1Q96RY5 1269 aa16.54■□□□□ 0.24
PTCD2-207ENST00000503868 BOLA2Q9H3K6 86 aa16.54■□□□□ 0.24
PTCD2-207ENST00000503868 MAP4K4O95819 1239 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-207ENST00000503868 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
PTCD2-207ENST00000503868 RILPL2Q969X0 211 aa16.53■□□□□ 0.24
PTCD2-207ENST00000503868 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
PTCD2-207ENST00000503868 PDE6BP35913 854 aa16.53■□□□□ 0.24
PTCD2-207ENST00000503868 CNTROBQ8N137 903 aa16.53■□□□□ 0.24
PTCD2-207ENST00000503868 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
PTCD2-207ENST00000503868 HAUS7Q99871 368 aa16.53■□□□□ 0.24
PTCD2-207ENST00000503868 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.23
PTCD2-207ENST00000503868 SRGNP10124 158 aa16.52■□□□□ 0.23
PTCD2-207ENST00000503868 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.23
PTCD2-207ENST00000503868 EVI5LQ96CN4 794 aa16.52■□□□□ 0.23
PTCD2-207ENST00000503868 AKAP11Q9UKA4 1901 aa16.52■□□□□ 0.23
PTCD2-207ENST00000503868 SNAP23O00161 211 aa16.51■□□□□ 0.23
PTCD2-207ENST00000503868 BBOX1O75936 387 aa16.51■□□□□ 0.23
PTCD2-207ENST00000503868 UBE4AQ14139 1066 aa16.51■□□□□ 0.23
PTCD2-207ENST00000503868 ANKRD2Q9GZV1 360 aa16.51■□□□□ 0.23
PTCD2-207ENST00000503868 SLC5A1P13866 664 aa16.5■□□□□ 0.23
PTCD2-207ENST00000503868 CHMLP26374 656 aa16.5■□□□□ 0.23
PTCD2-207ENST00000503868 IFIT1P09914 478 aaKnown RBP16.5■□□□□ 0.23
PTCD2-207ENST00000503868 NPR1P16066 1061 aa16.5■□□□□ 0.23
PTCD2-207ENST00000503868 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
PTCD2-207ENST00000503868 LRRC37AA6NMS7 1700 aa16.49■□□□□ 0.23
PTCD2-207ENST00000503868 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
PTCD2-207ENST00000503868 TTC39AQ5SRH9 613 aa16.49■□□□□ 0.23
PTCD2-207ENST00000503868 CCDC102BQ68D86 513 aa16.49■□□□□ 0.23
PTCD2-207ENST00000503868 ARID4AP29374 1257 aaPredicted RBP16.48■□□□□ 0.23
PTCD2-207ENST00000503868 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
PTCD2-207ENST00000503868 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
PTCD2-207ENST00000503868 MASTLQ96GX5 879 aa16.48■□□□□ 0.23
PTCD2-207ENST00000503868 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
PTCD2-207ENST00000503868 PHKA1P46020 1223 aa16.47■□□□□ 0.23
PTCD2-207ENST00000503868 SCARF1Q14162 830 aa16.47■□□□□ 0.23
PTCD2-207ENST00000503868 EDC3Q96F86 508 aaKnown RBP16.47■□□□□ 0.23
PTCD2-207ENST00000503868 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
PTCD2-207ENST00000503868 KIF13BQ9NQT8 1826 aa16.47■□□□□ 0.23
PTCD2-207ENST00000503868 IRS2Q9Y4H2 1338 aa16.47■□□□□ 0.23
PTCD2-207ENST00000503868 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
PTCD2-207ENST00000503868 SLC51AQ86UW1 340 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 PAG1Q9NWQ8 432 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 C10orf71Q711Q0 1435 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 UQCRFS1P1P0C7P4 283 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 MCAMP43121 646 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
PTCD2-207ENST00000503868 R3HDM1Q15032 1099 aaKnown RBP16.46■□□□□ 0.23
PTCD2-207ENST00000503868 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 SP8Q8IXZ3 490 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
PTCD2-207ENST00000503868 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
PTCD2-207ENST00000503868 MTFR1LQ9H019 292 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms