RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SSFA2P28290 1259 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 ADCK5Q3MIX3 580 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 CCDC158Q5M9N0 1113 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 ZSWIM6Q9HCJ5 1215 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 NIP7Q9Y221 180 aaKnown RBP eCLIP25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 SLC27A2O14975 620 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 CHGBP05060 677 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 MCMDC2Q4G0Z9 681 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 USPL1Q5W0Q7 1092 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 CNNM1Q9NRU3 951 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 ZNF652Q9Y2D9 606 aa25.65■■□□□ 1.7
UBE2D3-216ENST00000503742 ABCC12Q96J65 1359 aa25.64■■□□□ 1.7
UBE2D3-216ENST00000503742 HCLS1P14317 486 aaPredicted RBP25.64■■□□□ 1.7
UBE2D3-216ENST00000503742 ZKSCAN1P17029 563 aaPredicted RBP25.64■■□□□ 1.7
UBE2D3-216ENST00000503742 ATP2B3Q16720 1220 aa25.64■■□□□ 1.7
UBE2D3-216ENST00000503742 MEX3CQ5U5Q3 659 aaKnown RBP25.64■■□□□ 1.7
UBE2D3-216ENST00000503742 RGL2O15211 777 aa25.64■■□□□ 1.69
UBE2D3-216ENST00000503742 CASTP20810 708 aaKnown RBP25.64■■□□□ 1.69
UBE2D3-216ENST00000503742 KCNJ4P48050 445 aa25.64■■□□□ 1.69
UBE2D3-216ENST00000503742 GSE1Q14687 1217 aa25.64■■□□□ 1.69
UBE2D3-216ENST00000503742 GBP4Q96PP9 640 aa25.64■■□□□ 1.69
UBE2D3-216ENST00000503742 RPAP1Q9BWH6 1393 aaPredicted RBP25.63■■□□□ 1.69
UBE2D3-216ENST00000503742 AFF2P51816 1311 aa25.63■■□□□ 1.69
UBE2D3-216ENST00000503742 DDX11L8A8MPP1 907 aa25.63■■□□□ 1.69
UBE2D3-216ENST00000503742 ONECUT3O60422 494 aaPredicted RBP25.63■■□□□ 1.69
UBE2D3-216ENST00000503742 TTC39AQ5SRH9 613 aa25.63■■□□□ 1.69
UBE2D3-216ENST00000503742 RC3H1Q5TC82 1133 aaKnown RBP25.63■■□□□ 1.69
UBE2D3-216ENST00000503742 JAKMIP1Q96N16 626 aaKnown RBP25.63■■□□□ 1.69
UBE2D3-216ENST00000503742 ATRNO75882 1429 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 AK2P54819 239 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 KCNQ4P56696 695 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 TSGA10IPQ3SY00 556 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 GORABQ5T7V8 394 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 NOL8Q76FK4 1167 aaKnown RBP25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 SEC62Q99442 399 aaKnown RBP25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 HELLSQ9NRZ9 838 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 VPS53Q5VIR6 699 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 RNF20Q5VTR2 975 aa25.62■■□□□ 1.69
UBE2D3-216ENST00000503742 RTL9Q8NET4 1388 aa25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 FAM177BA6PVY3 158 aa25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 PDE8BO95263 885 aa25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 HSP90B1P14625 803 aaKnown RBP25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 ZMYM1Q5SVZ6 1142 aa25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 HMG20BQ9P0W2 317 aa25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 SBF2Q86WG5 1849 aa25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 SCN7AQ01118 1682 aa25.61■■□□□ 1.69
UBE2D3-216ENST00000503742 CCDC129Q6ZRS4 1044 aa25.6■■□□□ 1.69
UBE2D3-216ENST00000503742 RUFY3Q7L099 469 aa25.6■■□□□ 1.69
UBE2D3-216ENST00000503742 CYP46A1Q9Y6A2 500 aa25.6■■□□□ 1.69
UBE2D3-216ENST00000503742 CPA1P15085 419 aa25.6■■□□□ 1.69
UBE2D3-216ENST00000503742 PKP1Q13835 747 aa25.6■■□□□ 1.69
UBE2D3-216ENST00000503742 ZNF512BQ96KM6 892 aaPredicted RBP25.6■■□□□ 1.69
UBE2D3-216ENST00000503742 MROH5Q6ZUA9 1318 aa25.59■■□□□ 1.69
UBE2D3-216ENST00000503742 FAM182BQ5T319 152 aa25.59■■□□□ 1.69
UBE2D3-216ENST00000503742 LIMCH1Q9UPQ0 1083 aa25.59■■□□□ 1.69
UBE2D3-216ENST00000503742 LY75O60449 1722 aa25.59■■□□□ 1.69
UBE2D3-216ENST00000503742 AKAP11Q9UKA4 1901 aa25.59■■□□□ 1.69
UBE2D3-216ENST00000503742 RNF113AO15541 343 aaKnown RBP25.58■■□□□ 1.69
UBE2D3-216ENST00000503742 SCARF1Q14162 830 aa25.58■■□□□ 1.69
UBE2D3-216ENST00000503742 PSMA5P28066 241 aa25.58■■□□□ 1.69
UBE2D3-216ENST00000503742 CCDC152Q4G0S7 254 aa25.58■■□□□ 1.69
UBE2D3-216ENST00000503742 PDRG1Q9NUG6 133 aa25.58■■□□□ 1.69
UBE2D3-216ENST00000503742 ZDHHC9Q9Y397 364 aa25.58■■□□□ 1.69
UBE2D3-216ENST00000503742 ARAP2Q8WZ64 1704 aa25.58■■□□□ 1.68
UBE2D3-216ENST00000503742 RPS6KA4O75676 772 aa25.57■■□□□ 1.68
UBE2D3-216ENST00000503742 FKBP4Q02790 459 aaKnown RBP eCLIP25.57■■□□□ 1.682e-9■■□□□ 12.2
UBE2D3-216ENST00000503742 TRPC5Q9UL62 973 aaPredicted RBP25.57■■□□□ 1.68
UBE2D3-216ENST00000503742 U3KPZ7 1027 aaPredicted RBP25.57■■□□□ 1.68
UBE2D3-216ENST00000503742 FGFR2P21802 821 aa25.56■■□□□ 1.68
UBE2D3-216ENST00000503742 SLFNL1Q499Z3 407 aa25.56■■□□□ 1.68
UBE2D3-216ENST00000503742 SEC31BQ9NQW1 1179 aa25.56■■□□□ 1.68
UBE2D3-216ENST00000503742 TAF6LQ9Y6J9 622 aa25.56■■□□□ 1.68
UBE2D3-216ENST00000503742 TAF1LQ8IZX4 1826 aa25.56■■□□□ 1.68
UBE2D3-216ENST00000503742 BCL2L12Q9HB09 334 aa25.56■■□□□ 1.68
UBE2D3-216ENST00000503742 BAG4O95429 457 aaKnown RBP25.55■■□□□ 1.68
UBE2D3-216ENST00000503742 ZAP70P43403 619 aa25.55■■□□□ 1.68
UBE2D3-216ENST00000503742 TRAK2O60296 914 aa25.55■■□□□ 1.68
UBE2D3-216ENST00000503742 PUM3Q15397 648 aaKnown RBP25.55■■□□□ 1.68
UBE2D3-216ENST00000503742 LRRFIP1Q32MZ4 808 aaKnown RBP25.55■■□□□ 1.68
UBE2D3-216ENST00000503742 NARFQ9UHQ1 456 aa25.55■■□□□ 1.68
UBE2D3-216ENST00000503742 CCNL1Q9UK58 526 aaPredicted RBP25.55■■□□□ 1.68
UBE2D3-216ENST00000503742 MCAMP43121 646 aa25.54■■□□□ 1.68
UBE2D3-216ENST00000503742 LPIN2Q92539 896 aa25.54■■□□□ 1.68
UBE2D3-216ENST00000503742 DSCC1Q9BVC3 393 aa25.54■■□□□ 1.68
UBE2D3-216ENST00000503742 ALDH8A1Q9H2A2 487 aaPredicted RBP25.54■■□□□ 1.68
UBE2D3-216ENST00000503742 MAST3O60307 1309 aa25.54■■□□□ 1.68
UBE2D3-216ENST00000503742 ZFYP08048 801 aaPredicted RBP25.53■■□□□ 1.68
UBE2D3-216ENST00000503742 MYH7P12883 1935 aa25.53■■□□□ 1.68
UBE2D3-216ENST00000503742 PTMSP20962 102 aa25.53■■□□□ 1.68
UBE2D3-216ENST00000503742 COL9A3Q14050 684 aaPredicted RBP25.53■■□□□ 1.68
UBE2D3-216ENST00000503742 KRT32Q14532 448 aa25.53■■□□□ 1.68
UBE2D3-216ENST00000503742 SEPT12Q8IYM1 358 aa25.53■■□□□ 1.68
UBE2D3-216ENST00000503742 MPHOSPH8Q99549 860 aa25.53■■□□□ 1.68
UBE2D3-216ENST00000503742 ARID4AP29374 1257 aaPredicted RBP25.52■■□□□ 1.68
UBE2D3-216ENST00000503742 BLOC1S2Q6QNY1 142 aa25.52■■□□□ 1.68
UBE2D3-216ENST00000503742 ZSCAN31Q96LW9 406 aaPredicted RBP25.52■■□□□ 1.68
UBE2D3-216ENST00000503742 RPS6KB1P23443 525 aa25.51■■□□□ 1.67
UBE2D3-216ENST00000503742 ERFEQ4G0M1 354 aa25.51■■□□□ 1.67
UBE2D3-216ENST00000503742 PI16Q6UXB8 463 aa25.51■■□□□ 1.67
UBE2D3-216ENST00000503742 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms