RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 SCN9AQ15858 1988 aa13.02□□□□□ -0.32
COPS4-202ENST00000503682 SHTN1A0MZ66 631 aa13.02□□□□□ -0.33
COPS4-202ENST00000503682 H7C1W4 665 aa13.02□□□□□ -0.33
COPS4-202ENST00000503682 CTSWP56202 376 aa13.02□□□□□ -0.33
COPS4-202ENST00000503682 GCKRQ14397 625 aa13.02□□□□□ -0.33
COPS4-202ENST00000503682 WASHC4Q2M389 1173 aa13.02□□□□□ -0.33
COPS4-202ENST00000503682 MAP1SQ66K74 1059 aaPredicted RBP13.02□□□□□ -0.33
COPS4-202ENST00000503682 LDHDQ86WU2 507 aa13.02□□□□□ -0.33
COPS4-202ENST00000503682 TTLL11Q8NHH1 800 aa13.02□□□□□ -0.33
COPS4-202ENST00000503682 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
COPS4-202ENST00000503682 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
COPS4-202ENST00000503682 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
COPS4-202ENST00000503682 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
COPS4-202ENST00000503682 GMPSP49915 693 aaPredicted RBP13□□□□□ -0.33
COPS4-202ENST00000503682 CASP7P55210 303 aa13□□□□□ -0.33
COPS4-202ENST00000503682 UFL1O94874 794 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 CIAPIN1Q6FI81 312 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 ANKRD18AQ8IVF6 992 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 LINS1Q8NG48 757 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 KLRG1Q96E93 195 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 VPS33BQ9H267 617 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 ANKIB1Q9P2G1 1089 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 POLR2AP24928 1970 aaKnown RBP12.99□□□□□ -0.33
COPS4-202ENST00000503682 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
COPS4-202ENST00000503682 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
COPS4-202ENST00000503682 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 SLC4A10Q6U841 1118 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 BCL2L13Q9BXK5 485 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 GPRC5DQ9NZD1 345 aa12.99□□□□□ -0.33
COPS4-202ENST00000503682 PASKQ96RG2 1323 aa12.98□□□□□ -0.33
COPS4-202ENST00000503682 ECE2O60344 883 aa12.98□□□□□ -0.33
COPS4-202ENST00000503682 SLFN5Q08AF3 891 aa12.98□□□□□ -0.33
COPS4-202ENST00000503682 PNMA8AQ86V59 439 aaPredicted RBP12.98□□□□□ -0.33
COPS4-202ENST00000503682 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
COPS4-202ENST00000503682 PSMD14O00487 310 aa12.97□□□□□ -0.33
COPS4-202ENST00000503682 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
COPS4-202ENST00000503682 GGA1Q9UJY5 639 aa12.97□□□□□ -0.33
COPS4-202ENST00000503682 RTL9Q8NET4 1388 aa12.97□□□□□ -0.33
COPS4-202ENST00000503682 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
COPS4-202ENST00000503682 ITGA6P23229 1130 aa12.96□□□□□ -0.33
COPS4-202ENST00000503682 EPHA10Q5JZY3 1008 aa12.96□□□□□ -0.33
COPS4-202ENST00000503682 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
COPS4-202ENST00000503682 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.33
COPS4-202ENST00000503682 EYA3Q99504 573 aa12.96□□□□□ -0.33
COPS4-202ENST00000503682 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.33
COPS4-202ENST00000503682 PODXL2Q9NZ53 605 aa12.96□□□□□ -0.33
COPS4-202ENST00000503682 MINPP1Q9UNW1 487 aa12.96□□□□□ -0.33
COPS4-202ENST00000503682 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.34
COPS4-202ENST00000503682 E9PSI1 815 aa12.96□□□□□ -0.34
COPS4-202ENST00000503682 TRAF5O00463 557 aa12.96□□□□□ -0.34
COPS4-202ENST00000503682 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.34
COPS4-202ENST00000503682 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.34
COPS4-202ENST00000503682 PLA2G12BQ9BX93 195 aa12.96□□□□□ -0.34
COPS4-202ENST00000503682 CNOT7Q9UIV1 285 aaKnown RBP12.96□□□□□ -0.34
COPS4-202ENST00000503682 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.34
COPS4-202ENST00000503682 A0A1B0GUL6 1792 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 TRPM7Q96QT4 1865 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 XDHP47989 1333 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 PSME4Q14997 1843 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 CSF1RP07333 972 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 FOXO4P98177 505 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 TNIP1Q15025 636 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 SAMD7Q7Z3H4 446 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 MIER1Q8N108 512 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 SSH1Q8WYL5 1049 aa12.95□□□□□ -0.34
COPS4-202ENST00000503682 ADARB2Q9NS39 739 aaKnown RBP12.95□□□□□ -0.34
COPS4-202ENST00000503682 G3V3G9 751 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 SNAP23O00161 211 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 EGFRP00533 1210 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
COPS4-202ENST00000503682 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 USP50Q70EL3 339 aaPredicted RBP12.94□□□□□ -0.34
COPS4-202ENST00000503682 TXNRD3Q86VQ6 643 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
COPS4-202ENST00000503682 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
COPS4-202ENST00000503682 BSDC1Q9NW68 430 aaPredicted RBP12.94□□□□□ -0.34
COPS4-202ENST00000503682 GRM8O00222 908 aa12.93□□□□□ -0.34
COPS4-202ENST00000503682 KLRK1P26718 216 aa12.93□□□□□ -0.34
COPS4-202ENST00000503682 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
COPS4-202ENST00000503682 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
COPS4-202ENST00000503682 ZNF646O15015 1829 aaPredicted RBP12.93□□□□□ -0.34
COPS4-202ENST00000503682 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
COPS4-202ENST00000503682 CCT4P50991 539 aaKnown RBP12.93□□□□□ -0.34
COPS4-202ENST00000503682 TBC1D10BQ4KMP7 808 aaPredicted RBP12.93□□□□□ -0.34
COPS4-202ENST00000503682 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
COPS4-202ENST00000503682 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
COPS4-202ENST00000503682 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
COPS4-202ENST00000503682 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
COPS4-202ENST00000503682 SRCIN1Q9C0H9 1055 aa12.93□□□□□ -0.34
COPS4-202ENST00000503682 ANKRD18BA2A2Z9 1011 aa12.92□□□□□ -0.34
COPS4-202ENST00000503682 TMEM88BA6NKF7 163 aa12.92□□□□□ -0.34
COPS4-202ENST00000503682 TAF5LO75529 589 aa12.92□□□□□ -0.34
COPS4-202ENST00000503682 NBPF7P0C2Y1 421 aaPredicted RBP12.92□□□□□ -0.34
COPS4-202ENST00000503682 DIEXFQ68CQ4 756 aaKnown RBP12.92□□□□□ -0.34
COPS4-202ENST00000503682 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
COPS4-202ENST00000503682 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
COPS4-202ENST00000503682 GLIS2Q9BZE0 524 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms