RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ZNF594Q96JF6 807 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P35-201ENST00000503360 FAM83CQ9BQN1 747 aa5.14□□□□□ -1.59
HMGB1P35-201ENST00000503360 HIF3AQ9Y2N7 669 aa5.14□□□□□ -1.59
HMGB1P35-201ENST00000503360 RTCBQ9Y3I0 505 aaKnown RBP5.14□□□□□ -1.59
HMGB1P35-201ENST00000503360 OPLAHO14841 1288 aa5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 TM4SF5O14894 197 aa5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 XYLBO75191 536 aa5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 DGKZQ13574 1117 aa5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 GDF6Q6KF10 455 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 TRIM42Q8IWZ5 723 aa5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 KLHL23Q8NBE8 558 aa5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 UTP4Q969X6 686 aaKnown RBP5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 KLK14Q9P0G3 267 aa5.13□□□□□ -1.59
HMGB1P35-201ENST00000503360 RAD21O60216 631 aa5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 MMP20O60882 483 aa5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 RASA1P20936 1047 aa5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 HFE2Q6ZVN8 426 aa5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 CBLL1Q75N03 491 aa5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 FAM20CQ8IXL6 584 aa5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 AGGF1Q8N302 714 aaeCLIP5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 GALNT11Q8NCW6 608 aa5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 QTRT2Q9H974 415 aaKnown RBP5.12□□□□□ -1.59
HMGB1P35-201ENST00000503360 J3QW42 95 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 PRNPP04156 253 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 JUNBP17275 347 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 WEE1P30291 646 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 HDGFL1Q5TGJ6 251 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 KIAA1211Q6ZU35 1233 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 WNT8BQ93098 351 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 ASIC4Q96FT7 647 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 HINFPQ9BQA5 517 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 GTF3C3Q9Y5Q9 886 aa5.11□□□□□ -1.59
HMGB1P35-201ENST00000503360 FAM196BA6NMK8 535 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 PTK7Q13308 1070 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 ANKRD34AQ69YU3 496 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 LARP1Q6PKG0 1096 aaKnown RBP5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 ACAD11Q709F0 780 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 NLRP13Q86W25 1043 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 GIMAP7Q8NHV1 300 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 FBXL18Q96ME1 805 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 TRIM33Q9UPN9 1127 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 KCNMB2Q9Y691 235 aa5.1□□□□□ -1.59
HMGB1P35-201ENST00000503360 HMX2A2RU54 273 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 WISP1O95388 367 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 ITGB5P18084 799 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 OGFOD2Q6N063 350 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 FAM117BQ6P1L5 589 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 OR13H1Q8NG92 308 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 SHKBP1Q8TBC3 707 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 PIM2Q9P1W9 311 aa5.09□□□□□ -1.59
HMGB1P35-201ENST00000503360 SMNDC1O75940 238 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P35-201ENST00000503360 CDC27P30260 824 aa5.08□□□□□ -1.6
HMGB1P35-201ENST00000503360 DUOXA2Q1HG44 320 aa5.08□□□□□ -1.6
HMGB1P35-201ENST00000503360 ABI1Q8IZP0 508 aa5.08□□□□□ -1.6
HMGB1P35-201ENST00000503360 NSUN5Q96P11 429 aaKnown RBP5.08□□□□□ -1.6
HMGB1P35-201ENST00000503360 MAFBQ9Y5Q3 323 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P35-201ENST00000503360 MEGF11A6BM72 1044 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 LINC01387J3KSC0 135 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 FSCN2O14926 492 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 KIF4AO95239 1232 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 C8AP07357 584 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 FOSL1P15407 271 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 DPYDQ12882 1025 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 HYAL2Q12891 473 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 MSMPQ1L6U9 139 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 BEND4Q6ZU67 534 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 TREML1Q86YW5 311 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 ANKMY2Q8IV38 441 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 CMTR1Q8N1G2 835 aaKnown RBP5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 VTI1AQ96AJ9 217 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 ADAM19Q9H013 955 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 RNF208Q9H0X6 261 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 OSGEPQ9NPF4 335 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 FAM13BQ9NYF5 915 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 KCNK4Q9NYG8 393 aa5.07□□□□□ -1.6
HMGB1P35-201ENST00000503360 POM121CA8CG34 1229 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 BMP3P12645 472 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 PIP4K2BP78356 416 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 FLIIQ13045 1269 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 VSIG10LQ86VR7 867 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 RGL4Q8IZJ4 473 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 SPACA7Q96KW9 195 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 SEC31BQ9NQW1 1179 aa5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 ANGEL1Q9UNK9 670 aaKnown RBP5.06□□□□□ -1.6
HMGB1P35-201ENST00000503360 SART1O43290 800 aaKnown RBP5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 CRTC2Q53ET0 693 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 KANK4Q5T7N3 995 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 FOXD4L4Q8WXT5 416 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 POM121Q96HA1 1249 aa5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 METTL22Q9BUU2 404 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 TFIP11Q9UBB9 837 aaKnown RBP5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 LRFN2Q9ULH4 789 aa5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 LEMD3Q9Y2U8 911 aa5.05□□□□□ -1.6
HMGB1P35-201ENST00000503360 WDR64B1ANS9 1081 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L15C9J2P7 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L10C9JJH3 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L13C9JLJ4 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L12C9JPN9 530 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms