RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 OGFRQ9NZT2 677 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 RBM8AQ9Y5S9 174 aaKnown RBP6.11□□□□□ -1.43
CLDND1-208ENST00000503004 UTYO14607 1347 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 CCDC171Q6TFL3 1326 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 OVOS2A0A0G2JMS6 1433 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 SNRPA1P09661 255 aaKnown RBP6.11□□□□□ -1.43
CLDND1-208ENST00000503004 HSPA2P54652 639 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 HMGN5P82970 282 aaKnown RBP6.11□□□□□ -1.43
CLDND1-208ENST00000503004 NECTIN1Q15223 517 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 ANKRD7Q92527 254 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 PRIMPOLQ96LW4 560 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 TSPYL1Q9H0U9 437 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 CALCOCO1Q9P1Z2 691 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 CNPY2Q9Y2B0 182 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 WDR33Q9C0J8 1336 aaKnown RBP6.11□□□□□ -1.43
CLDND1-208ENST00000503004 MST1RQ04912 1400 aa6.11□□□□□ -1.43
CLDND1-208ENST00000503004 A0A087WZG4 1122 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 FIBPO43427 364 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 STX6O43752 255 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 CABP4P57796 275 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 PTPN12Q05209 780 aaKnown RBP6.1□□□□□ -1.43
CLDND1-208ENST00000503004 ST3GAL1Q11201 340 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 TERF2Q15554 542 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 ME3Q16798 604 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 LRSAM1Q6UWE0 723 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 DCAF5Q96JK2 942 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 PDRG1Q9NUG6 133 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 DBNLQ9UJU6 430 aaKnown RBP6.1□□□□□ -1.43
CLDND1-208ENST00000503004 SMC3Q9UQE7 1217 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 ERICH4A6NGS2 130 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 MBD3O95983 291 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 ZKSCAN1P17029 563 aaPredicted RBP6.1□□□□□ -1.43
CLDND1-208ENST00000503004 GJB2P29033 226 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 TFCP2Q12800 502 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 CREB3L3Q68CJ9 461 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 MAP4K1Q92918 833 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 FMNL2Q96PY5 1086 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 MYCBPQ99417 103 aaPredicted RBP6.1□□□□□ -1.43
CLDND1-208ENST00000503004 FEZ1Q99689 392 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 ZSWIM6Q9HCJ5 1215 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 CHMP3Q9Y3E7 222 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 CYP46A1Q9Y6A2 500 aa6.1□□□□□ -1.43
CLDND1-208ENST00000503004 SIPA1L3O60292 1781 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 C5P01031 1676 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 ZSCAN22P10073 491 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 GTF2A1P52655 376 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 SLFNL1Q499Z3 407 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 SEC62Q99442 399 aaKnown RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 NCAPGQ9BPX3 1015 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 RSPH14Q9UHP6 348 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 TPCN1Q9ULQ1 816 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 SH3BP1Q9Y3L3 701 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 CAMTA1Q9Y6Y1 1673 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 VPS37CA5D8V6 355 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 NBPF26B4DH59 902 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 SLC27A2O14975 620 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 DHX16O60231 1041 aaKnown RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 RFX5P48382 616 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 KIAA2012Q0VF49 1180 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 NBPF14Q5TI25 921 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 VPS53Q5VIR6 699 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 NBPF10Q6P3W6 841 aaKnown RBP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 FAM173BQ6P4H8 233 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 CCDC129Q6ZRS4 1044 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 FERMT3Q86UX7 667 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 NBPF15Q8N660 670 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 DBNDD2Q9BQY9 259 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLDND1-208ENST00000503004 CEP83Q9Y592 693 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 CRYBG1Q9Y4K1 1723 aa6.09□□□□□ -1.43
CLDND1-208ENST00000503004 ALS2Q96Q42 1657 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 F13A1P00488 732 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 A1BGP04217 495 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 DNM1Q05193 864 aaKnown RBP6.08□□□□□ -1.44
CLDND1-208ENST00000503004 STK3Q13188 491 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 SEMA3FQ13275 785 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 TNNI3KQ59H18 835 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 LMBR1LQ6UX01 489 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 TTLL7Q6ZT98 887 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 DDX46Q7L014 1031 aaKnown RBP6.08□□□□□ -1.44
CLDND1-208ENST00000503004 CADPS2Q86UW7 1296 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 PLCD4Q9BRC7 762 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 TTC12Q9H892 705 aaPredicted RBP6.08□□□□□ -1.44
CLDND1-208ENST00000503004 COPRSQ9NQ92 184 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 CCDC39Q9UFE4 941 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 FPGT-TNNI3KV9GXZ4 949 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 COL15A1P39059 1388 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 TOM1L2Q6ZVM7 507 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 ZBTB3Q9H5J0 574 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 PRDM11Q9NQV5 511 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 MTMR6Q9Y217 621 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 ZNF330Q9Y3S2 320 aaPredicted RBP6.08□□□□□ -1.44
CLDND1-208ENST00000503004 ADAMTS7Q9UKP4 1686 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 SPATA31A3Q5VYP0 1347 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 SCN11AQ9UI33 1791 aa6.08□□□□□ -1.44
CLDND1-208ENST00000503004 A6NJR5 290 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 TIMM10P62072 90 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 SATB1Q01826 763 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms