RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MCMDC2Q4G0Z9 681 aa19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 ATP10AO60312 1499 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 GOLGA8AA7E2F4 631 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 SYCP1Q15431 976 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 USHBP1Q8N6Y0 703 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 GNL3LQ9NVN8 582 aaKnown RBP19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 SLC12A7Q9Y666 1083 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 SYNMO15061 1565 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 ABCC1P33527 1531 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 GOLIM4O00461 696 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 IDH1O75874 414 aaKnown RBP19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 NCOA7Q8NI08 942 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 KIAA1524Q8TCG1 905 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 PDLIM2Q96JY6 352 aa19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 CCDC43Q96MW1 224 aaKnown RBP19.73■□□□□ 0.75
HMGXB3-201ENST00000502717 NPATQ14207 1427 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 EBAG9O00559 213 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 PPFIA3O75145 1194 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 PYCARDQ9ULZ3 195 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 PPP2R3AQ06190 1150 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 EIF4A2Q14240 407 aaKnown RBP19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 MICALL1Q8N3F8 863 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 N4BP3O15049 544 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 NAA15Q9BXJ9 866 aaKnown RBP19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 TM6SF1Q9BZW5 370 aa19.72■□□□□ 0.75
HMGXB3-201ENST00000502717 MYL5Q02045 173 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 FAM173BQ6P4H8 233 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 CLEC17AQ6ZS10 378 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 RGS12O14924 1447 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 KLF18A0A0U1RQI7 1052 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 PTPDC1A2A3K4 754 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 RPS6KB1P23443 525 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 ALS2CR12Q96Q35 445 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 ZNF215Q9UL58 517 aaPredicted RBP19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 METAP2P50579 478 aaKnown RBP eCLIP19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 SPAG1Q07617 926 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 BRAPQ7Z569 592 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 PYM1Q9BRP8 204 aaKnown RBP19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 CARD6Q9BX69 1037 aa19.71■□□□□ 0.75
HMGXB3-201ENST00000502717 BAG1Q99933 345 aaPredicted RBP19.7■□□□□ 0.74
HMGXB3-201ENST00000502717 TUBB2AQ13885 445 aa19.7■□□□□ 0.74
HMGXB3-201ENST00000502717 MPHOSPH8Q99549 860 aa19.7■□□□□ 0.74
HMGXB3-201ENST00000502717 TUBB2BQ9BVA1 445 aa19.7■□□□□ 0.74
HMGXB3-201ENST00000502717 CUL4AQ13619 759 aa19.7■□□□□ 0.74
HMGXB3-201ENST00000502717 CHAMP1Q96JM3 812 aa19.7■□□□□ 0.74
HMGXB3-201ENST00000502717 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 OPA1O60313 960 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 STARD3NLO95772 234 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 LRMPQ12912 555 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 PLCD3Q8N3E9 789 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 JADE2Q9NQC1 790 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 HSF2BPO75031 334 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 DHX32Q7L7V1 743 aaKnown RBP19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 CHL1O00533 1208 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 ZNF652Q9Y2D9 606 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 ELP1O95163 1332 aa19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 CTCFLQ8NI51 663 aaPredicted RBP19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
HMGXB3-201ENST00000502717 KARSQ15046 597 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 ZRSR2Q15696 482 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 PLCD4Q9BRC7 762 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 PUF60Q9UHX1 559 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 MARCKSP29966 332 aaPredicted RBP19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 ALG1Q9BT22 464 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 NAPBQ9H115 298 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 MTMR7Q9Y216 660 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 IFIT3O14879 490 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 HSP90AA4PQ58FG1 418 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 DDX46Q7L014 1031 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 TAX1BP1Q86VP1 789 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 MRFAP1L1Q96HT8 127 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 CHPF2Q9P2E5 772 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 PALD1Q9ULE6 856 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 SBNO2Q9Y2G9 1366 aa19.68■□□□□ 0.74
HMGXB3-201ENST00000502717 KRT28Q7Z3Y7 464 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 PREX2Q70Z35 1606 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 IKQ13123 557 aaPredicted RBP19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 G2E3Q7L622 706 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 EXOC5O00471 708 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 KRT18P05783 430 aaKnown RBP19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 CDC37L1Q7L3B6 337 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 A0A087WZG4 1122 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 PHACTR2O75167 634 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 PRM3Q9NNZ6 103 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 LZTFL1Q9NQ48 299 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 RNF216Q9NWF9 866 aaPredicted RBP19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 MTMR6Q9Y217 621 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 FAM135BQ49AJ0 1406 aa19.67■□□□□ 0.74
HMGXB3-201ENST00000502717 A0A1B0GVL5 298 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 VGLL3A8MV65 326 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 SLC27A2O14975 620 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 ZNF569Q5MCW4 686 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 OAS2P29728 719 aaKnown RBP19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 IL13P35225 146 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 HAND2P61296 217 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 CYLC1P35663 651 aaPredicted RBP19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 LRRC8AQ8IWT6 810 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms