RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 HSP90AB3PQ58FF7 597 aa17.4■□□□□ 0.38
NEAT1-201ENST00000499732 GIGYF2Q6Y7W6 1299 aaKnown RBP17.4■□□□□ 0.38
NEAT1-201ENST00000499732 ERC1Q8IUD2 1116 aa17.4■□□□□ 0.38
NEAT1-201ENST00000499732 FAM184AQ8NB25 1140 aa17.4■□□□□ 0.38
NEAT1-201ENST00000499732 CCDC191Q8NCU4 936 aa17.4■□□□□ 0.38
NEAT1-201ENST00000499732 ISCA1Q9BUE6 129 aa17.4■□□□□ 0.38
NEAT1-201ENST00000499732 TAF1LQ8IZX4 1826 aa17.4■□□□□ 0.38
NEAT1-201ENST00000499732 CASZ1Q86V15 1759 aa17.39■□□□□ 0.37
NEAT1-201ENST00000499732 NUP98P52948 1817 aa17.39■□□□□ 0.37
NEAT1-201ENST00000499732 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.37
NEAT1-201ENST00000499732 RFX5P48382 616 aaPredicted RBP17.38■□□□□ 0.37
NEAT1-201ENST00000499732 CHAMP1Q96JM3 812 aa17.38■□□□□ 0.37
NEAT1-201ENST00000499732 MAP7D2Q96T17 732 aa17.38■□□□□ 0.37
NEAT1-201ENST00000499732 RAD50Q92878 1312 aa17.38■□□□□ 0.37
NEAT1-201ENST00000499732 UVSSAQ2YD98 709 aa17.37■□□□□ 0.37
NEAT1-201ENST00000499732 FOXD4L5Q5VV16 416 aaPredicted RBP17.37■□□□□ 0.37
NEAT1-201ENST00000499732 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
NEAT1-201ENST00000499732 FOXD4L4Q8WXT5 416 aaPredicted RBP17.37■□□□□ 0.37
NEAT1-201ENST00000499732 USP42Q9H9J4 1324 aaKnown RBP17.37■□□□□ 0.37
NEAT1-201ENST00000499732 SASH1O94885 1247 aa17.37■□□□□ 0.37
NEAT1-201ENST00000499732 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
NEAT1-201ENST00000499732 R3HCC1Q9Y3T6 440 aaKnown RBP17.37■□□□□ 0.37
NEAT1-201ENST00000499732 C4BP0C0L5 1744 aa17.37■□□□□ 0.37
NEAT1-201ENST00000499732 RPAP1Q9BWH6 1393 aaPredicted RBP17.36■□□□□ 0.37
NEAT1-201ENST00000499732 FOXO4P98177 505 aa17.36■□□□□ 0.37
NEAT1-201ENST00000499732 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
NEAT1-201ENST00000499732 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
NEAT1-201ENST00000499732 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
NEAT1-201ENST00000499732 LRRC4BQ9NT99 713 aa17.36■□□□□ 0.37
NEAT1-201ENST00000499732 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
NEAT1-201ENST00000499732 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
NEAT1-201ENST00000499732 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.35■□□□□ 0.37
NEAT1-201ENST00000499732 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
NEAT1-201ENST00000499732 LETM1O95202 739 aaPredicted RBP17.35■□□□□ 0.37
NEAT1-201ENST00000499732 PTPN12Q05209 780 aaKnown RBP17.35■□□□□ 0.37
NEAT1-201ENST00000499732 HLFQ16534 295 aa17.35■□□□□ 0.37
NEAT1-201ENST00000499732 ZNF827Q17R98 1081 aa17.35■□□□□ 0.37
NEAT1-201ENST00000499732 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
NEAT1-201ENST00000499732 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
NEAT1-201ENST00000499732 SIL1Q9H173 461 aa17.35■□□□□ 0.37
NEAT1-201ENST00000499732 RGL2O15211 777 aa17.34■□□□□ 0.37
NEAT1-201ENST00000499732 SGSM2O43147 1006 aa17.34■□□□□ 0.37
NEAT1-201ENST00000499732 POLD1P28340 1107 aa17.34■□□□□ 0.37
NEAT1-201ENST00000499732 SYT17Q9BSW7 474 aa17.34■□□□□ 0.37
NEAT1-201ENST00000499732 FHDC1Q9C0D6 1143 aaPredicted RBP17.34■□□□□ 0.37
NEAT1-201ENST00000499732 TFCP2L1Q9NZI6 479 aa17.34■□□□□ 0.37
NEAT1-201ENST00000499732 TTC41PQ6P2S7 1318 aa17.34■□□□□ 0.37
NEAT1-201ENST00000499732 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.37
NEAT1-201ENST00000499732 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.37
NEAT1-201ENST00000499732 NOL8Q76FK4 1167 aaKnown RBP17.33■□□□□ 0.37
NEAT1-201ENST00000499732 USP48Q86UV5 1035 aa17.33■□□□□ 0.37
NEAT1-201ENST00000499732 RNF214Q8ND24 703 aa17.33■□□□□ 0.37
NEAT1-201ENST00000499732 SGIP1Q9BQI5 828 aa17.33■□□□□ 0.37
NEAT1-201ENST00000499732 CAMTA2O94983 1202 aa17.33■□□□□ 0.36
NEAT1-201ENST00000499732 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
NEAT1-201ENST00000499732 MTERF4Q7Z6M4 381 aaKnown RBP17.33■□□□□ 0.36
NEAT1-201ENST00000499732 CNTROBQ8N137 903 aa17.33■□□□□ 0.36
NEAT1-201ENST00000499732 TTC14Q96N46 770 aa17.33■□□□□ 0.36
NEAT1-201ENST00000499732 BCORQ6W2J9 1755 aa17.32■□□□□ 0.36
NEAT1-201ENST00000499732 UQCRHLA0A096LP55 91 aa17.32■□□□□ 0.36
NEAT1-201ENST00000499732 DYNC1I1O14576 645 aa17.32■□□□□ 0.36
NEAT1-201ENST00000499732 UQCRHP07919 91 aa17.32■□□□□ 0.36
NEAT1-201ENST00000499732 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
NEAT1-201ENST00000499732 AACSQ86V21 672 aa17.32■□□□□ 0.36
NEAT1-201ENST00000499732 IL25Q9H293 177 aa17.32■□□□□ 0.36
NEAT1-201ENST00000499732 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
NEAT1-201ENST00000499732 GNPATO15228 680 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 PCCAP05165 728 aaPredicted RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 NLRP10Q86W26 655 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 ZNF34Q8IZ26 560 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 RTCBQ9Y3I0 505 aaKnown RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 SNX14Q9Y5W7 946 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 SCN7AQ01118 1682 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 PTMAP06454 111 aaKnown RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 ZSCAN22P10073 491 aaPredicted RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 AK7Q96M32 723 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 LSG1Q9H089 658 aaKnown RBP17.31■□□□□ 0.36
NEAT1-201ENST00000499732 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
NEAT1-201ENST00000499732 GLRX3O76003 335 aaKnown RBP17.3■□□□□ 0.36
NEAT1-201ENST00000499732 UBE2HP62256 183 aa17.3■□□□□ 0.36
NEAT1-201ENST00000499732 ZBTB38Q8NAP3 1195 aaPredicted RBP17.3■□□□□ 0.36
NEAT1-201ENST00000499732 MYH3P11055 1940 aa17.3■□□□□ 0.36
NEAT1-201ENST00000499732 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
NEAT1-201ENST00000499732 MAP4K4O95819 1239 aaPredicted RBP17.28■□□□□ 0.36
NEAT1-201ENST00000499732 GPTP24298 496 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 GPATCH3Q96I76 525 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 PLA2G12BQ9BX93 195 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
NEAT1-201ENST00000499732 NARFQ9UHQ1 456 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
NEAT1-201ENST00000499732 PNPLA7Q6ZV29 1317 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 C4AP0C0L4 1744 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms