RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 ECE2O60344 883 aa21.64■■□□□ 1.05
CDKN2A-209ENST00000498628 TTLL11Q8NHH1 800 aa21.64■■□□□ 1.05
CDKN2A-209ENST00000498628 ZC3H15Q8WU90 426 aaKnown RBP21.64■■□□□ 1.05
CDKN2A-209ENST00000498628 XDHP47989 1333 aa21.63■■□□□ 1.05
CDKN2A-209ENST00000498628 ATP2B4P23634 1241 aa21.63■■□□□ 1.05
CDKN2A-209ENST00000498628 RPS12P25398 132 aaKnown RBP21.63■■□□□ 1.05
CDKN2A-209ENST00000498628 GCKRQ14397 625 aa21.63■■□□□ 1.05
CDKN2A-209ENST00000498628 DOK7Q18PE1 504 aa21.63■■□□□ 1.05
CDKN2A-209ENST00000498628 UBE3BQ7Z3V4 1068 aa21.63■■□□□ 1.05
CDKN2A-209ENST00000498628 LINS1Q8NG48 757 aa21.63■■□□□ 1.05
CDKN2A-209ENST00000498628 DEFB115Q30KQ5 88 aa21.62■■□□□ 1.05
CDKN2A-209ENST00000498628 BSDC1Q9NW68 430 aaPredicted RBP21.62■■□□□ 1.05
CDKN2A-209ENST00000498628 ABT1Q9ULW3 272 aaKnown RBP21.62■■□□□ 1.05
CDKN2A-209ENST00000498628 DUOX1Q9NRD9 1551 aa21.61■■□□□ 1.05
CDKN2A-209ENST00000498628 LTBP1Q14766 1721 aa21.61■■□□□ 1.05
CDKN2A-209ENST00000498628 PSMD14O00487 310 aa21.61■■□□□ 1.05
CDKN2A-209ENST00000498628 HSPA1AP0DMV8 641 aaKnown RBP21.61■■□□□ 1.05
CDKN2A-209ENST00000498628 HSPA1BP0DMV9 641 aaKnown RBP21.61■■□□□ 1.05
CDKN2A-209ENST00000498628 IGHMBP2P38935 993 aaKnown RBP21.61■■□□□ 1.05
CDKN2A-209ENST00000498628 RTL9Q8NET4 1388 aa21.61■■□□□ 1.05
CDKN2A-209ENST00000498628 MICALL2Q8IY33 904 aa21.6■■□□□ 1.05
CDKN2A-209ENST00000498628 PLA2G12BQ9BX93 195 aa21.6■■□□□ 1.05
CDKN2A-209ENST00000498628 GREM2Q9H772 168 aa21.6■■□□□ 1.05
CDKN2A-209ENST00000498628 PGAP2Q9UHJ9 254 aa21.6■■□□□ 1.05
CDKN2A-209ENST00000498628 CACNA1FO60840 1977 aa21.59■■□□□ 1.05
CDKN2A-209ENST00000498628 RASSF10A6NK89 507 aa21.59■■□□□ 1.05
CDKN2A-209ENST00000498628 ZBTB12Q9Y330 459 aaPredicted RBP21.59■■□□□ 1.05
CDKN2A-209ENST00000498628 VEGFBP49765 207 aa21.58■■□□□ 1.05
CDKN2A-209ENST00000498628 CDC37L1Q7L3B6 337 aa21.58■■□□□ 1.05
CDKN2A-209ENST00000498628 GPR101Q96P66 508 aaPredicted RBP21.58■■□□□ 1.05
CDKN2A-209ENST00000498628 MPHOSPH8Q99549 860 aa21.58■■□□□ 1.05
CDKN2A-209ENST00000498628 SPINK5Q9NQ38 1064 aaPredicted RBP21.58■■□□□ 1.05
CDKN2A-209ENST00000498628 PODNQ7Z5L7 613 aa21.57■■□□□ 1.04
CDKN2A-209ENST00000498628 AIDAQ96BJ3 306 aa21.57■■□□□ 1.04
CDKN2A-209ENST00000498628 MINPP1Q9UNW1 487 aa21.57■■□□□ 1.04
CDKN2A-209ENST00000498628 VIL1P09327 827 aaKnown RBP21.56■■□□□ 1.04
CDKN2A-209ENST00000498628 ECE1P42892 770 aa21.56■■□□□ 1.04
CDKN2A-209ENST00000498628 ANKRD2Q9GZV1 360 aa21.56■■□□□ 1.04
CDKN2A-209ENST00000498628 ITGA6P23229 1130 aa21.55■■□□□ 1.04
CDKN2A-209ENST00000498628 TRPM4Q8TD43 1214 aa21.55■■□□□ 1.04
CDKN2A-209ENST00000498628 LEMD3Q9Y2U8 911 aa21.55■■□□□ 1.04
CDKN2A-209ENST00000498628 COL4A1P02462 1669 aa21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 ANKRD18BA2A2Z9 1011 aa21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 TRAF5O00463 557 aa21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 CSF1RP07333 972 aa21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 CCT4P50991 539 aaKnown RBP21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 HIRAP54198 1017 aaPredicted RBP21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 CASP7P55210 303 aa21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 PAXIP1Q6ZW49 1069 aaPredicted RBP21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 AGBL3Q8NEM8 1001 aa21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 KCNQ5Q9NR82 932 aa21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 WDR33Q9C0J8 1336 aaKnown RBP21.54■■□□□ 1.04
CDKN2A-209ENST00000498628 F6X3S4 739 aa21.53■■□□□ 1.04
CDKN2A-209ENST00000498628 CELF2O95319 508 aaKnown RBP21.53■■□□□ 1.04
CDKN2A-209ENST00000498628 BEND3Q5T5X7 828 aa21.53■■□□□ 1.04
CDKN2A-209ENST00000498628 RBM26Q5T8P6 1007 aaKnown RBP21.53■■□□□ 1.04
CDKN2A-209ENST00000498628 SAMD7Q7Z3H4 446 aa21.53■■□□□ 1.04
CDKN2A-209ENST00000498628 DCPSQ96C86 337 aaKnown RBP21.53■■□□□ 1.04
CDKN2A-209ENST00000498628 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
CDKN2A-209ENST00000498628 MED23Q9ULK4 1368 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 USP17L3A6NCW0 530 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 USP17L4A6NCW7 530 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 E9PSI1 815 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 TBC1D10BQ4KMP7 808 aaPredicted RBP21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 CST9Q5W186 159 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 RSBN1LQ6PCB5 846 aaPredicted RBP21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 USP17L1Q7RTZ2 530 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 C9orf78Q9NZ63 289 aaPredicted RBP21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 TLL2Q9Y6L7 1015 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 MYH3P11055 1940 aa21.52■■□□□ 1.04
CDKN2A-209ENST00000498628 ALDH1L1O75891 902 aa21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 KCNJ4P48050 445 aa21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 MAP2K1Q02750 393 aaPredicted RBP21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 FMR1Q06787 632 aaKnown RBP eCLIP21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 IFIT5Q13325 482 aaKnown RBP21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 FAM161AQ3B820 660 aa21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 COL13A1Q5TAT6 717 aaPredicted RBP21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 CHMP3Q9Y3E7 222 aa21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 ZNF521Q96K83 1311 aa21.51■■□□□ 1.03
CDKN2A-209ENST00000498628 SHTN1A0MZ66 631 aa21.5■■□□□ 1.03
CDKN2A-209ENST00000498628 KIF4BQ2VIQ3 1234 aa21.5■■□□□ 1.03
CDKN2A-209ENST00000498628 SLC4A10Q6U841 1118 aa21.5■■□□□ 1.03
CDKN2A-209ENST00000498628 USP48Q86UV5 1035 aa21.5■■□□□ 1.03
CDKN2A-209ENST00000498628 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
CDKN2A-209ENST00000498628 COA1Q9GZY4 146 aa21.5■■□□□ 1.03
CDKN2A-209ENST00000498628 ZNF408Q9H9D4 720 aa21.5■■□□□ 1.03
CDKN2A-209ENST00000498628 GRM8O00222 908 aa21.49■■□□□ 1.03
CDKN2A-209ENST00000498628 CAPNS2Q96L46 248 aa21.49■■□□□ 1.03
CDKN2A-209ENST00000498628 ZNF804BA4D1E1 1349 aa21.49■■□□□ 1.03
CDKN2A-209ENST00000498628 USP17L8P0C7I0 530 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 CTCFP49711 727 aaPredicted RBP21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 MMP14P50281 582 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 CCDC57Q2TAC2 916 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 KRT26Q7Z3Y9 468 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 TNS4Q8IZW8 715 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 HHIPL1Q96JK4 782 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 BEGAINQ9BUH8 593 aa21.48■■□□□ 1.03
CDKN2A-209ENST00000498628 TRPM7Q96QT4 1865 aa21.47■■□□□ 1.03
CDKN2A-209ENST00000498628 ZNF280AP59817 542 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms