RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, human

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN1-216	ENST00000498535	SEC31B	Q9NQW1	1179 aa		32.69	■■■□□ 2.82
MKRN1-216	ENST00000498535		G3V3G9	751 aa		32.68	■■■□□ 2.82
MKRN1-216	ENST00000498535	RPS12	P25398	132 aa	Known RBP	32.68	■■■□□ 2.82
MKRN1-216	ENST00000498535	MAP2K2	P36507	400 aa		32.68	■■■□□ 2.82
MKRN1-216	ENST00000498535	DCAF8	Q5TAQ9	597 aa		32.68	■■■□□ 2.82
MKRN1-216	ENST00000498535	ANKIB1	Q9P2G1	1089 aa		32.68	■■■□□ 2.82
MKRN1-216	ENST00000498535	PDE8A	O60658	829 aa		32.67	■■■□□ 2.82
MKRN1-216	ENST00000498535	METTL22	Q9BUU2	404 aa	Predicted RBP	32.67	■■■□□ 2.82
MKRN1-216	ENST00000498535	PODXL2	Q9NZ53	605 aa		32.67	■■■□□ 2.82
MKRN1-216	ENST00000498535	COL4A1	P02462	1669 aa		32.66	■■■□□ 2.82
MKRN1-216	ENST00000498535	SAMD7	Q7Z3H4	446 aa		32.66	■■■□□ 2.82
MKRN1-216	ENST00000498535	HHIPL1	Q96JK4	782 aa		32.66	■■■□□ 2.82
MKRN1-216	ENST00000498535	THSD7B	Q9C0I4	1608 aa		32.66	■■■□□ 2.82
MKRN1-216	ENST00000498535	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.65	■■■□□ 2.82
MKRN1-216	ENST00000498535	AOC2	O75106	756 aa		32.64	■■■□□ 2.82
MKRN1-216	ENST00000498535	UFL1	O94874	794 aa		32.64	■■■□□ 2.82
MKRN1-216	ENST00000498535	USP48	Q86UV5	1035 aa		32.64	■■■□□ 2.82
MKRN1-216	ENST00000498535	JARID2	Q92833	1246 aa	Predicted RBP	32.64	■■■□□ 2.82
MKRN1-216	ENST00000498535	KCNQ5	Q9NR82	932 aa		32.64	■■■□□ 2.82
MKRN1-216	ENST00000498535	GGA1	Q9UJY5	639 aa		32.64	■■■□□ 2.82
MKRN1-216	ENST00000498535	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.63	■■■□□ 2.81
MKRN1-216	ENST00000498535	MAP3K2	Q9Y2U5	619 aa		32.63	■■■□□ 2.81
MKRN1-216	ENST00000498535	RBM26	Q5T8P6	1007 aa	Known RBP	32.62	■■■□□ 2.81
MKRN1-216	ENST00000498535	RTL9	Q8NET4	1388 aa		32.61	■■■□□ 2.81
MKRN1-216	ENST00000498535	ANKRD18A	Q8IVF6	992 aa		32.61	■■■□□ 2.81
MKRN1-216	ENST00000498535	TSPYL6	Q8N831	410 aa		32.61	■■■□□ 2.81
MKRN1-216	ENST00000498535	STK31	Q9BXU1	1019 aa		32.61	■■■□□ 2.81
MKRN1-216	ENST00000498535	KSR2	Q6VAB6	950 aa		32.6	■■■□□ 2.81
MKRN1-216	ENST00000498535	KRT26	Q7Z3Y9	468 aa		32.6	■■■□□ 2.81
MKRN1-216	ENST00000498535	DCPS	Q96C86	337 aa	Known RBP	32.6	■■■□□ 2.81
MKRN1-216	ENST00000498535	VIL1	P09327	827 aa	Known RBP	32.59	■■■□□ 2.81
MKRN1-216	ENST00000498535	NEXN	Q0ZGT2	675 aa		32.59	■■■□□ 2.81
MKRN1-216	ENST00000498535	TSR2	Q969E8	191 aa	Known RBP	32.59	■■■□□ 2.81
MKRN1-216	ENST00000498535	PI4KAP2	A4QPH2	592 aa		32.58	■■■□□ 2.81
MKRN1-216	ENST00000498535	PI4KAP1	Q8N8J0	262 aa		32.58	■■■□□ 2.81
MKRN1-216	ENST00000498535	EGFR	P00533	1210 aa		32.57	■■■□□ 2.8
MKRN1-216	ENST00000498535	XDH	P47989	1333 aa		32.56	■■■□□ 2.8
MKRN1-216	ENST00000498535	CA12	O43570	354 aa		32.56	■■■□□ 2.8
MKRN1-216	ENST00000498535	HUNK	P57058	714 aa		32.56	■■■□□ 2.8
MKRN1-216	ENST00000498535	KIF4B	Q2VIQ3	1234 aa		32.56	■■■□□ 2.8
MKRN1-216	ENST00000498535	CDC5L	Q99459	802 aa	Known RBP	32.56	■■■□□ 2.8
MKRN1-216	ENST00000498535	BRPF1	P55201	1214 aa	Predicted RBP	32.55	■■■□□ 2.8
MKRN1-216	ENST00000498535	CCDC27	Q2M243	656 aa		32.55	■■■□□ 2.8
MKRN1-216	ENST00000498535	CTSW	P56202	376 aa		32.54	■■■□□ 2.8
MKRN1-216	ENST00000498535	DLK2	Q6UY11	383 aa		32.54	■■■□□ 2.8
MKRN1-216	ENST00000498535	TSKS	Q9UJT2	592 aa		32.54	■■■□□ 2.8
MKRN1-216	ENST00000498535	POLR2A	P24928	1970 aa	Known RBP	32.53	■■■□□ 2.8
MKRN1-216	ENST00000498535	IGKV5-2	P06315	115 aa		32.53	■■■□□ 2.8
MKRN1-216	ENST00000498535	ATP2B4	P23634	1241 aa		32.53	■■■□□ 2.8
MKRN1-216	ENST00000498535	NOG	Q13253	232 aa		32.53	■■■□□ 2.8
MKRN1-216	ENST00000498535	C2orf69	Q8N8R5	385 aa		32.53	■■■□□ 2.8
MKRN1-216	ENST00000498535	ABHD8	Q96I13	439 aa		32.53	■■■□□ 2.8
MKRN1-216	ENST00000498535	SCN9A	Q15858	1988 aa		32.52	■■■□□ 2.8
MKRN1-216	ENST00000498535	TWISTNB	Q3B726	338 aa	Predicted RBP	32.52	■■■□□ 2.8
MKRN1-216	ENST00000498535	CCDC184	Q52MB2	194 aa		32.52	■■■□□ 2.8
MKRN1-216	ENST00000498535	SULF1	Q8IWU6	871 aa		32.52	■■■□□ 2.8
MKRN1-216	ENST00000498535	WWC1	Q8IX03	1113 aa		32.52	■■■□□ 2.8
MKRN1-216	ENST00000498535	GBA2	Q9HCG7	927 aa	Predicted RBP	32.52	■■■□□ 2.8
MKRN1-216	ENST00000498535	ADM5	C9JUS6	153 aa		32.51	■■■□□ 2.79
MKRN1-216	ENST00000498535	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.51	■■■□□ 2.79
MKRN1-216	ENST00000498535	AGBL3	Q8NEM8	1001 aa		32.51	■■■□□ 2.79
MKRN1-216	ENST00000498535	TTLL11	Q8NHH1	800 aa		32.5	■■■□□ 2.79
MKRN1-216	ENST00000498535	GGA3	Q9NZ52	723 aa		32.5	■■■□□ 2.79
MKRN1-216	ENST00000498535	SLC4A2	P04920	1241 aa		32.49	■■■□□ 2.79
MKRN1-216	ENST00000498535	CWF19L2	Q2TBE0	894 aa	Known RBP	32.49	■■■□□ 2.79
MKRN1-216	ENST00000498535	BSDC1	Q9NW68	430 aa	Predicted RBP	32.49	■■■□□ 2.79
MKRN1-216	ENST00000498535	NEURL1B	A8MQ27	555 aa		32.48	■■■□□ 2.79
MKRN1-216	ENST00000498535	RGMB	Q6NW40	437 aa		32.48	■■■□□ 2.79
MKRN1-216	ENST00000498535	PODN	Q7Z5L7	613 aa		32.48	■■■□□ 2.79
MKRN1-216	ENST00000498535	ZNF280A	P59817	542 aa	Predicted RBP	32.47	■■■□□ 2.79
MKRN1-216	ENST00000498535	GREM2	Q9H772	168 aa		32.47	■■■□□ 2.79
MKRN1-216	ENST00000498535	IL16	Q14005	1332 aa		32.47	■■■□□ 2.79
MKRN1-216	ENST00000498535	ZNF609	O15014	1411 aa		32.46	■■■□□ 2.79
MKRN1-216	ENST00000498535	USP17L3	A6NCW0	530 aa		32.46	■■■□□ 2.79
MKRN1-216	ENST00000498535	USP17L4	A6NCW7	530 aa		32.46	■■■□□ 2.79
MKRN1-216	ENST00000498535	G2E3	Q7L622	706 aa		32.46	■■■□□ 2.79
MKRN1-216	ENST00000498535	USP17L1	Q7RTZ2	530 aa		32.46	■■■□□ 2.79
MKRN1-216	ENST00000498535	UBE3B	Q7Z3V4	1068 aa		32.46	■■■□□ 2.79
MKRN1-216	ENST00000498535	MINPP1	Q9UNW1	487 aa		32.46	■■■□□ 2.79
MKRN1-216	ENST00000498535	USP17L8	P0C7I0	530 aa		32.45	■■■□□ 2.79
MKRN1-216	ENST00000498535	CCDC102A	Q96A19	550 aa		32.45	■■■□□ 2.79
MKRN1-216	ENST00000498535	MYH3	P11055	1940 aa		32.44	■■■□□ 2.78
MKRN1-216	ENST00000498535		H7C1W4	665 aa		32.44	■■■□□ 2.78
MKRN1-216	ENST00000498535	SCARF1	Q14162	830 aa		32.44	■■■□□ 2.78
MKRN1-216	ENST00000498535	ZNF157	P51786	506 aa	Predicted RBP	32.43	■■■□□ 2.78
MKRN1-216	ENST00000498535	ANGEL2	Q5VTE6	544 aa	Known RBP	32.43	■■■□□ 2.78
MKRN1-216	ENST00000498535	ASTN2	O75129	1339 aa	Predicted RBP	32.43	■■■□□ 2.78
MKRN1-216	ENST00000498535	IGHMBP2	P38935	993 aa	Known RBP	32.42	■■■□□ 2.78
MKRN1-216	ENST00000498535	NCBP3	Q53F19	620 aa	Known RBP	32.42	■■■□□ 2.78
MKRN1-216	ENST00000498535	ZIC5	Q96T25	663 aa		32.42	■■■□□ 2.78
MKRN1-216	ENST00000498535	GML	Q99445	158 aa		32.42	■■■□□ 2.78
MKRN1-216	ENST00000498535	MYOZ2	Q9NPC6	264 aa		32.42	■■■□□ 2.78
MKRN1-216	ENST00000498535	MED23	Q9ULK4	1368 aa		32.42	■■■□□ 2.78
MKRN1-216	ENST00000498535	CCT4	P50991	539 aa	Known RBP	32.41	■■■□□ 2.78
MKRN1-216	ENST00000498535	FLII	Q13045	1269 aa		32.41	■■■□□ 2.78
MKRN1-216	ENST00000498535	CDCA5	Q96FF9	252 aa		32.41	■■■□□ 2.78
MKRN1-216	ENST00000498535	MRS2	Q9HD23	443 aa		32.41	■■■□□ 2.78
MKRN1-216	ENST00000498535	PSME4	Q14997	1843 aa		32.41	■■■□□ 2.78
MKRN1-216	ENST00000498535	FKBP5	Q13451	457 aa	Predicted RBP	32.4	■■■□□ 2.78
MKRN1-216	ENST00000498535	GCKR	Q14397	625 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms