RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 SPG7Q9UQ90 795 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 URI1O94763 535 aaPredicted RBP15.09■□□□□ 0.01
VEGFA-215ENST00000497139 CORO7P57737 925 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 FAM160A1Q05DH4 1040 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 POLA2Q14181 598 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 HSP90AB4PQ58FF6 505 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 STK31Q9BXU1 1019 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 RCOR1Q9UKL0 485 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 NUTM2DQ5VT03 806 aaPredicted RBP15.09■□□□□ 0.01
VEGFA-215ENST00000497139 PACS2Q86VP3 889 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 NUTM1Q86Y26 1132 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 RHPN1Q8TCX5 695 aa15.09■□□□□ 0.01
VEGFA-215ENST00000497139 POTEB2H3BUK9 544 aa15.08■□□□□ 0.01
VEGFA-215ENST00000497139 HIP1O00291 1037 aa15.08■□□□□ 0.01
VEGFA-215ENST00000497139 EIF3JO75822 258 aaKnown RBP15.08■□□□□ 0.01
VEGFA-215ENST00000497139 GORABQ5T7V8 394 aa15.08■□□□□ 0.01
VEGFA-215ENST00000497139 G2E3Q7L622 706 aa15.08■□□□□ 0.01
VEGFA-215ENST00000497139 TMC6Q7Z403 805 aa15.08■□□□□ 0.01
VEGFA-215ENST00000497139 EIF3CLB5ME19 914 aaKnown RBP15.08■□□□□ 0
VEGFA-215ENST00000497139 MAP3K9P80192 1104 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 CCAR1Q8IX12 1150 aaKnown RBP15.08■□□□□ 0
VEGFA-215ENST00000497139 ZBTB9Q96C00 473 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 CEP89Q96ST8 783 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 EIF3CQ99613 913 aaKnown RBP15.08■□□□□ 0
VEGFA-215ENST00000497139 FAM107BQ9H098 131 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 TMX1Q9H3N1 280 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 SNRKQ9NRH2 765 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 PTH1RQ03431 593 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 CREB3L3Q68CJ9 461 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 EFCAB13Q8IY85 973 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 GOLGA1Q92805 767 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
VEGFA-215ENST00000497139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.07■□□□□ 0
VEGFA-215ENST00000497139 ENGASEQ8NFI3 743 aa15.07■□□□□ 0
VEGFA-215ENST00000497139 XPO4Q9C0E2 1151 aaKnown RBP15.07■□□□□ 0
VEGFA-215ENST00000497139 TXLNAP40222 546 aa15.07■□□□□ 0
VEGFA-215ENST00000497139 LONRF2Q1L5Z9 754 aa15.07■□□□□ 0
VEGFA-215ENST00000497139 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
VEGFA-215ENST00000497139 RPAINQ86UA6 219 aa15.07■□□□□ 0
VEGFA-215ENST00000497139 SRGAP3O43295 1099 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 UBTFL1P0CB47 393 aaPredicted RBP15.06■□□□□ 0
VEGFA-215ENST00000497139 ZRSR1Q15695 479 aaKnown RBP15.06■□□□□ 0
VEGFA-215ENST00000497139 MAP4K1Q92918 833 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 PARD6BQ9BYG5 372 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 MRFAP1Q9Y605 127 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 MAP4K4O95819 1239 aaPredicted RBP15.06■□□□□ 0
VEGFA-215ENST00000497139 RPS6KB1P23443 525 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 GSCP56915 257 aaPredicted RBP15.06■□□□□ 0
VEGFA-215ENST00000497139 PPP2R3AQ06190 1150 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 APOBRQ0VD83 1088 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 FLIIQ13045 1269 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 TSGA10IPQ3SY00 556 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 MCTP2Q6DN12 878 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 MMS22LQ6ZRQ5 1243 aa15.06■□□□□ 0
VEGFA-215ENST00000497139 RBM8AQ9Y5S9 174 aaKnown RBP15.06■□□□□ 0
VEGFA-215ENST00000497139 H3BQF6 201 aa15.05■□□□□ 0
VEGFA-215ENST00000497139 MYO1BO43795 1136 aa15.05■□□□□ 0
VEGFA-215ENST00000497139 USP5P45974 858 aa15.05■□□□□ 0
VEGFA-215ENST00000497139 HDXQ7Z353 690 aa15.05■□□□□ 0
VEGFA-215ENST00000497139 IFNKQ9P0W0 207 aa15.05■□□□□ 0
VEGFA-215ENST00000497139 HMG20BQ9P0W2 317 aa15.05■□□□□ 0
VEGFA-215ENST00000497139 CBFA2T2O43439 604 aa15.05■□□□□ -0
VEGFA-215ENST00000497139 KIF1CO43896 1103 aaKnown RBP15.05■□□□□ -0
VEGFA-215ENST00000497139 BRD2P25440 801 aaKnown RBP15.05■□□□□ -0
VEGFA-215ENST00000497139 NAA16Q6N069 864 aaPredicted RBP15.05■□□□□ -0
VEGFA-215ENST00000497139 STK26Q9P289 416 aa15.05■□□□□ -0
VEGFA-215ENST00000497139 KIF13AQ9H1H9 1805 aa15.05■□□□□ -0
VEGFA-215ENST00000497139 AGLP35573 1532 aa15.05■□□□□ -0
VEGFA-215ENST00000497139 SURF6O75683 361 aaKnown RBP15.04■□□□□ -0
VEGFA-215ENST00000497139 CCDC172P0C7W6 258 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 GPATCH3Q96I76 525 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 ZNF396Q96N95 335 aaPredicted RBP15.04■□□□□ -0
VEGFA-215ENST00000497139 CEP83Q9Y592 693 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 RGPD1P0DJD0 1748 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 MON2Q7Z3U7 1717 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 H3BQV1 296 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 ERLIN1O75477 346 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 APPP05067 770 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 FBLN1P23142 703 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 IFFO2Q5TF58 517 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 EVI5LQ96CN4 794 aa15.04■□□□□ -0
VEGFA-215ENST00000497139 IKBKBO14920 756 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 SLC27A2O14975 620 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 ARHGAP6O43182 974 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 TUBBP07437 444 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 MCM10Q7L590 875 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 DRC1Q96MC2 740 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 LLPHQ9BRT6 129 aaKnown RBP15.03■□□□□ -0
VEGFA-215ENST00000497139 USP44Q9H0E7 712 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 GOLPH3LQ9H4A5 285 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 TUBB2AQ13885 445 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 TOB2Q14106 344 aaPredicted RBP15.03■□□□□ -0
VEGFA-215ENST00000497139 BRF1Q92994 677 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 DDX11Q96FC9 970 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 COG3Q96JB2 828 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 TUBB2BQ9BVA1 445 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 SPATA31D1Q6ZQQ2 1576 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms