RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 TRIM29Q14134 588 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 LPIN2Q92539 896 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 DENND2AQ9ULE3 1009 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 CCAR1Q8IX12 1150 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 PAG1Q9NWQ8 432 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 PDE1AP54750 535 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 SLC9C2Q5TAH2 1124 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 ZNF287Q9HBT7 754 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 NFIXQ14938 502 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 MON2Q7Z3U7 1717 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 COL3A1P02461 1466 aaPredicted RBP11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 PICALMQ13492 652 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 ANP32BQ92688 251 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 UBAC1Q9BSL1 405 aa11.28□□□□□ -0.6
GAPVD1-219ENST00000495955 SLIT3O75094 1523 aa11.27□□□□□ -0.6
GAPVD1-219ENST00000495955 KDM6AO15550 1401 aaPredicted RBP11.27□□□□□ -0.6
GAPVD1-219ENST00000495955 NPR1P16066 1061 aa11.27□□□□□ -0.6
GAPVD1-219ENST00000495955 CHRNDQ07001 517 aa11.27□□□□□ -0.6
GAPVD1-219ENST00000495955 CRNKL1Q9BZJ0 848 aaKnown RBP11.27□□□□□ -0.6
GAPVD1-219ENST00000495955 TTC22Q5TAA0 569 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 MCTP1Q6DN14 999 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 DBNDD2Q9BQY9 259 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 FOSBP53539 338 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 MASTLQ96GX5 879 aa11.27□□□□□ -0.61
GAPVD1-219ENST00000495955 RNF123Q5XPI4 1314 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 CCDC69A6NI79 296 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 NEK4P51957 841 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 MAGEB6Q8N7X4 407 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 PIM2Q9P1W9 311 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 BBOX1O75936 387 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 ZNF444Q8N0Y2 327 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
GAPVD1-219ENST00000495955 PRPF40BQ6NWY9 871 aaKnown RBP11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 ZNF213O14771 459 aa11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 ZFYP08048 801 aaPredicted RBP11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 MIGA1Q8NAN2 632 aa11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 IGKV5-2P06315 115 aa11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 NFAT5O94916 1531 aa11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 MAGEB6P1A0A0J9YX57 407 aa11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 JAKMIP1Q96N16 626 aaKnown RBP11.25□□□□□ -0.61
GAPVD1-219ENST00000495955 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 XDHP47989 1333 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 C21orf2O43822 256 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 GYG1P46976 350 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 GRAPQ13588 217 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 INTS5Q6P9B9 1019 aaKnown RBP11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 GRAPLQ8TC17 118 aaPredicted RBP11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 AKAP12Q02952 1782 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 H7C1W4 665 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 GTF2IP78347 998 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 BCL9O00512 1426 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 CCDC93Q567U6 631 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 BLOC1S2Q6QNY1 142 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 ZNF804BA4D1E1 1349 aa11.24□□□□□ -0.61
GAPVD1-219ENST00000495955 COL23A1Q86Y22 540 aaPredicted RBP11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 WDR66Q8TBY9 1149 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 SDSP20132 328 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 KRT32Q14532 448 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 PTF1AQ7RTS3 328 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 TCEAL9Q9UHQ7 104 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 SMC3Q9UQE7 1217 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 STK3Q13188 491 aa11.23□□□□□ -0.61
GAPVD1-219ENST00000495955 HAND2P61296 217 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 BMP2KLQ5H9B9 411 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 ISCA1Q9BUE6 129 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 RNF113AO15541 343 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 BCAMP50895 628 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 GRM1Q13255 1194 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 FOXD4L6Q3SYB3 417 aaPredicted RBP11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 FOXD4L3Q6VB84 417 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms