RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	PODXL2	Q9NZ53	605 aa		18.24	■□□□□ 0.51
CALD1-222	ENST00000495522	VSIG10	Q8N0Z9	540 aa		18.23	■□□□□ 0.51
CALD1-222	ENST00000495522	RNF214	Q8ND24	703 aa		18.23	■□□□□ 0.51
CALD1-222	ENST00000495522	CYP21A2	P08686	494 aa		18.23	■□□□□ 0.51
CALD1-222	ENST00000495522	TRIM28	Q13263	835 aa	Known RBP	18.23	■□□□□ 0.51
CALD1-222	ENST00000495522	SPEF2	Q9C093	1822 aa		18.22	■□□□□ 0.51
CALD1-222	ENST00000495522		A0A1B0GUL7	405 aa		18.22	■□□□□ 0.51
CALD1-222	ENST00000495522	KIF6	Q6ZMV9	814 aa		18.22	■□□□□ 0.51
CALD1-222	ENST00000495522	FBXO3	Q9UK99	471 aa		18.22	■□□□□ 0.51
CALD1-222	ENST00000495522	IFIT1	P09914	478 aa	Known RBP	18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	CCDC57	Q2TAC2	916 aa		18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	ZMYM1	Q5SVZ6	1142 aa		18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	KLHL34	Q8N239	644 aa		18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	FAM184A	Q8NB25	1140 aa		18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	CEP126	Q9P2H0	1117 aa		18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	CDC37L1	Q7L3B6	337 aa		18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	DSCC1	Q9BVC3	393 aa		18.21	■□□□□ 0.51
CALD1-222	ENST00000495522	PCCA	P05165	728 aa	Predicted RBP	18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	HMGB1	P09429	215 aa	Known RBP	18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	STK3	Q13188	491 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522		Q6ZUG5	572 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	DNAJC10	Q8IXB1	793 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	PIGB	Q92521	554 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	GTF3C6	Q969F1	213 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	PUS3	Q9BZE2	481 aa	Known RBP	18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	ASAP1	Q9ULH1	1129 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	ROBO1	Q9Y6N7	1651 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	STARD3NL	O95772	234 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	MSN	P26038	577 aa	Known RBP	18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	KRT85	P78386	507 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	PLA2G12B	Q9BX93	195 aa		18.2	■□□□□ 0.5
CALD1-222	ENST00000495522	AKAP2	Q9Y2D5	859 aa		18.19	■□□□□ 0.5
CALD1-222	ENST00000495522	RNF113A	O15541	343 aa	Known RBP	18.18	■□□□□ 0.5
CALD1-222	ENST00000495522	TPRN	Q4KMQ1	711 aa		18.18	■□□□□ 0.5
CALD1-222	ENST00000495522	HSP90B1	P14625	803 aa	Known RBP	18.18	■□□□□ 0.5
CALD1-222	ENST00000495522	UVSSA	Q2YD98	709 aa		18.18	■□□□□ 0.5
CALD1-222	ENST00000495522	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.18	■□□□□ 0.5
CALD1-222	ENST00000495522	ELP1	O95163	1332 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	CCDC158	Q5M9N0	1113 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	STOX1	Q6ZVD7	989 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	FERMT3	Q86UX7	667 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	BTG4	Q9NY30	223 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	MAP3K15	Q6ZN16	1313 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	SLFNL1	Q499Z3	407 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	TAF7L	Q5H9L4	462 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	DHX32	Q7L7V1	743 aa	Known RBP	18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	FAM89A	Q96GI7	184 aa		18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	NOL7	Q9UMY1	257 aa	Known RBP	18.17	■□□□□ 0.5
CALD1-222	ENST00000495522	MAST3	O60307	1309 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	CSF1R	P07333	972 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	HSPD1	P10809	573 aa	Known RBP	18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	FGD1	P98174	961 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	TTC39A	Q5SRH9	613 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	GORAB	Q5T7V8	394 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	CCDC39	Q9UFE4	941 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	ITGB4	P16144	1822 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	LAMA4	Q16363	1823 aa		18.16	■□□□□ 0.5
CALD1-222	ENST00000495522	IFIT5	Q13325	482 aa	Known RBP	18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	TTC6	Q86TZ1	520 aa		18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	BRF1	Q92994	677 aa		18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	XAGE2	Q96GT9	111 aa		18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	CDHR2	Q9BYE9	1310 aa		18.15	■□□□□ 0.5
CALD1-222	ENST00000495522	JAK2	O60674	1132 aa		18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	PFKFB2	O60825	505 aa		18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	LLPH	Q9BRT6	129 aa	Known RBP	18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	DISP2	A7MBM2	1401 aa		18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	TOM1	O60784	492 aa		18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	ADORA1	P30542	326 aa		18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	HSP90AB3P	Q58FF7	597 aa		18.14	■□□□□ 0.49
CALD1-222	ENST00000495522	LRRC2	Q9BYS8	371 aa		18.14	■□□□□ 0.49
CALD1-222	ENST00000495522		M0R2C6	588 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	ZFY	P08048	801 aa	Predicted RBP	18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	EXOSC10	Q01780	885 aa	Known RBP	18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	FAM173B	Q6P4H8	233 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	ABCC12	Q96J65	1359 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	COL14A1	Q05707	1796 aa	Known RBP	18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	BCL9	O00512	1426 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522		E7EWF7	191 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	MCM5	P33992	734 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	SCRN1	Q12765	414 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	FUCA2	Q9BTY2	467 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	AGXT2	Q9BYV1	514 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	ZMYND15	Q9H091	742 aa		18.13	■□□□□ 0.49
CALD1-222	ENST00000495522	LRP6	O75581	1613 aa		18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	GIMAP6	Q6P9H5	292 aa		18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	NLRP10	Q86W26	655 aa		18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	SMARCC2	Q8TAQ2	1214 aa		18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	OSBP2	Q969R2	916 aa		18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	SPATA32	Q96LK8	384 aa		18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	ZKSCAN5	Q9Y2L8	839 aa		18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.12	■□□□□ 0.49
CALD1-222	ENST00000495522	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.12	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms