RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	GLRX3	O76003	335 aa	Known RBP	11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	NPR1	P16066	1061 aa		11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	POLD1	P28340	1107 aa		11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	ALDH1B1	P30837	517 aa		11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	R3HDM1	Q15032	1099 aa	Known RBP	11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	TTC22	Q5TAA0	569 aa		11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	CELF1	Q92879	486 aa	Known RBP	11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	NEUROD6	Q96NK8	337 aa		11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	ANKRD2	Q9GZV1	360 aa		11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484	LAMB2	P55268	1798 aa		11.3	□□□□□ -0.6
PCDH15-223	ENST00000495484		A0A1B0GUL7	405 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	PUM3	Q15397	648 aa	Known RBP	11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	LPIN2	Q92539	896 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	TUBGCP6	Q96RT7	1819 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	DDX60	Q8IY21	1712 aa	Known RBP	11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484		H0YIN7	160 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	SRGN	P10124	158 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	CHRND	Q07001	517 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	ATP2B3	Q16720	1220 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	VGLL2	Q8N8G2	317 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	MASTL	Q96GX5	879 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	MINPP1	Q9UNW1	487 aa		11.29	□□□□□ -0.6
PCDH15-223	ENST00000495484	EIF5B	O60841	1220 aa	Known RBP	11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	SLC5A1	P13866	664 aa		11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	TIMM10	P62072	90 aa		11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	CCDC158	Q5M9N0	1113 aa		11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	GORAB	Q5T7V8	394 aa		11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	TMX4	Q9H1E5	349 aa	Predicted RBP	11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	DBNL	Q9UJU6	430 aa	Known RBP	11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	MYH3	P11055	1940 aa		11.28	□□□□□ -0.6
PCDH15-223	ENST00000495484	IFIT1	P09914	478 aa	Known RBP	11.27	□□□□□ -0.6
PCDH15-223	ENST00000495484	ATP5J	P18859	108 aa		11.27	□□□□□ -0.6
PCDH15-223	ENST00000495484	UBE4A	Q14139	1066 aa		11.27	□□□□□ -0.6
PCDH15-223	ENST00000495484	PI4K2B	Q8TCG2	481 aa		11.27	□□□□□ -0.6
PCDH15-223	ENST00000495484	ZBTB7A	O95365	584 aa		11.27	□□□□□ -0.61
PCDH15-223	ENST00000495484	FGFR2	P21802	821 aa		11.27	□□□□□ -0.61
PCDH15-223	ENST00000495484	STYK1	Q6J9G0	422 aa		11.27	□□□□□ -0.61
PCDH15-223	ENST00000495484	ILDR2	Q71H61	639 aa		11.27	□□□□□ -0.61
PCDH15-223	ENST00000495484	C2CD5	Q86YS7	1000 aa		11.27	□□□□□ -0.61
PCDH15-223	ENST00000495484	XAGE2	Q96GT9	111 aa		11.27	□□□□□ -0.61
PCDH15-223	ENST00000495484	DBNDD2	Q9BQY9	259 aa		11.27	□□□□□ -0.61
PCDH15-223	ENST00000495484	NRXN2	Q9P2S2	1712 aa		11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	LRP5	O75197	1615 aa		11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	ZNF609	O15014	1411 aa		11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	HELB	Q8NG08	1087 aa	Predicted RBP	11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	CNKSR1	Q969H4	720 aa		11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	TLR7	Q9NYK1	1049 aa	Known RBP	11.26	□□□□□ -0.61
PCDH15-223	ENST00000495484	TAF5L	O75529	589 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	GSPT1	P15170	499 aa	Known RBP	11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	KCNJ4	P48050	445 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	CASC1	Q6TDU7	716 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	SP8	Q8IXZ3	490 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	CNTROB	Q8N137	903 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	LEMD3	Q9Y2U8	911 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	XDH	P47989	1333 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	TRIM6-TRIM34	B2RNG4	842 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	PPEF1	O14829	653 aa	Predicted RBP	11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	UQCRFS1P1	P0C7P4	283 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	SDS	P20132	328 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	TTC39A	Q5SRH9	613 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	TSHZ3	Q63HK5	1081 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	TICAM2	Q86XR7	235 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	ANKIB1	Q9P2G1	1089 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	ATP6V0A2	Q9Y487	856 aa		11.25	□□□□□ -0.61
PCDH15-223	ENST00000495484	CDC45	O75419	566 aa		11.24	□□□□□ -0.61
PCDH15-223	ENST00000495484	TGFB2	P61812	414 aa		11.24	□□□□□ -0.61
PCDH15-223	ENST00000495484	CAVIN4	Q5BKX8	364 aa		11.24	□□□□□ -0.61
PCDH15-223	ENST00000495484	EVI5L	Q96CN4	794 aa		11.24	□□□□□ -0.61
PCDH15-223	ENST00000495484	BACH2	Q9BYV9	841 aa		11.24	□□□□□ -0.61
PCDH15-223	ENST00000495484	C10orf71	Q711Q0	1435 aa		11.24	□□□□□ -0.61
PCDH15-223	ENST00000495484	PSD	A5PKW4	1024 aa	Predicted RBP	11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	ATP2B4	P23634	1241 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	RILPL2	Q969X0	211 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	HAUS7	Q99871	368 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	BOLA2	Q9H3K6	86 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	GNL3L	Q9NVN8	582 aa	Known RBP	11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	PODXL2	Q9NZ53	605 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	ZNF804B	A4D1E1	1349 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	ADORA1	P30542	326 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	C8orf34	Q49A92	452 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	GRIPAP1	Q4V328	841 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	CCDC102B	Q68D86	513 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	CC2D2B	Q6DHV5	1058 aa		11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.23	□□□□□ -0.61
PCDH15-223	ENST00000495484	HIP1	O00291	1037 aa		11.22	□□□□□ -0.61
PCDH15-223	ENST00000495484	VPS37D	Q86XT2	251 aa		11.22	□□□□□ -0.61
PCDH15-223	ENST00000495484	GGA1	Q9UJY5	639 aa		11.22	□□□□□ -0.61
PCDH15-223	ENST00000495484	CD2AP	Q9Y5K6	639 aa		11.22	□□□□□ -0.61
PCDH15-223	ENST00000495484	ZBTB22	O15209	634 aa		11.21	□□□□□ -0.61
PCDH15-223	ENST00000495484	ARID4A	P29374	1257 aa	Predicted RBP	11.21	□□□□□ -0.61
PCDH15-223	ENST00000495484	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.21	□□□□□ -0.61
PCDH15-223	ENST00000495484	C15orf52	Q6ZUT6	534 aa	Known RBP	11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms