RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 GPC2Q8N158 579 aa26.14■■□□□ 1.78
CCDC12-207ENST00000494655 PODXL2Q9NZ53 605 aa26.14■■□□□ 1.78
CCDC12-207ENST00000494655 UTYO14607 1347 aa26.14■■□□□ 1.77
CCDC12-207ENST00000494655 NBPF7P0C2Y1 421 aaPredicted RBP26.13■■□□□ 1.77
CCDC12-207ENST00000494655 FOXO4P98177 505 aa26.13■■□□□ 1.77
CCDC12-207ENST00000494655 LMBR1LQ6UX01 489 aa26.13■■□□□ 1.77
CCDC12-207ENST00000494655 FRAT1Q92837 279 aaPredicted RBP26.13■■□□□ 1.77
CCDC12-207ENST00000494655 ZNRF3Q9ULT6 936 aa26.13■■□□□ 1.77
CCDC12-207ENST00000494655 G3V3G9 751 aa26.12■■□□□ 1.77
CCDC12-207ENST00000494655 DCAF8Q5TAQ9 597 aa26.12■■□□□ 1.77
CCDC12-207ENST00000494655 TBC1D16Q8TBP0 767 aa26.12■■□□□ 1.77
CCDC12-207ENST00000494655 L3MBTL3Q96JM7 780 aaPredicted RBP26.11■■□□□ 1.77
CCDC12-207ENST00000494655 ZC3H12CQ9C0D7 883 aaKnown RBP26.11■■□□□ 1.77
CCDC12-207ENST00000494655 HDAC5Q9UQL6 1122 aa26.11■■□□□ 1.77
CCDC12-207ENST00000494655 GJA3Q9Y6H8 435 aa26.11■■□□□ 1.77
CCDC12-207ENST00000494655 ATP2B4P23634 1241 aa26.1■■□□□ 1.77
CCDC12-207ENST00000494655 SUCLG2Q96I99 432 aa26.1■■□□□ 1.77
CCDC12-207ENST00000494655 ANKRD2Q9GZV1 360 aa26.1■■□□□ 1.77
CCDC12-207ENST00000494655 POLLQ9UGP5 575 aa26.1■■□□□ 1.77
CCDC12-207ENST00000494655 RIMBP2O15034 1052 aa26.09■■□□□ 1.77
CCDC12-207ENST00000494655 LMOD1P29536 600 aaPredicted RBP26.09■■□□□ 1.77
CCDC12-207ENST00000494655 RBM46Q8TBY0 533 aaKnown RBP26.09■■□□□ 1.77
CCDC12-207ENST00000494655 BCAR3O75815 825 aa26.08■■□□□ 1.77
CCDC12-207ENST00000494655 UBTFL1P0CB47 393 aaPredicted RBP26.08■■□□□ 1.77
CCDC12-207ENST00000494655 EPHA10Q5JZY3 1008 aa26.08■■□□□ 1.77
CCDC12-207ENST00000494655 ATF7IPQ6VMQ6 1270 aa26.08■■□□□ 1.77
CCDC12-207ENST00000494655 MINPP1Q9UNW1 487 aa26.08■■□□□ 1.77
CCDC12-207ENST00000494655 KCNJ4P48050 445 aa26.07■■□□□ 1.76
CCDC12-207ENST00000494655 TNIP1Q15025 636 aa26.07■■□□□ 1.76
CCDC12-207ENST00000494655 ZKSCAN2Q63HK3 967 aa26.07■■□□□ 1.76
CCDC12-207ENST00000494655 USP44Q9H0E7 712 aa26.07■■□□□ 1.76
CCDC12-207ENST00000494655 BICC1Q9H694 974 aaKnown RBP26.07■■□□□ 1.76
CCDC12-207ENST00000494655 HACL1Q9UJ83 578 aa26.07■■□□□ 1.76
CCDC12-207ENST00000494655 A0A1B0GUL6 1792 aa26.07■■□□□ 1.76
CCDC12-207ENST00000494655 CIAPIN1Q6FI81 312 aa26.06■■□□□ 1.76
CCDC12-207ENST00000494655 CNNM1Q9NRU3 951 aa26.06■■□□□ 1.76
CCDC12-207ENST00000494655 SMC1BQ8NDV3 1235 aa26.05■■□□□ 1.76
CCDC12-207ENST00000494655 DBNDD1Q9H9R9 158 aa26.05■■□□□ 1.76
CCDC12-207ENST00000494655 MED23Q9ULK4 1368 aa26.05■■□□□ 1.76
CCDC12-207ENST00000494655 ECE2O60344 883 aa26.04■■□□□ 1.76
CCDC12-207ENST00000494655 TRIM27P14373 513 aa26.04■■□□□ 1.76
CCDC12-207ENST00000494655 RABL6Q3YEC7 729 aaPredicted RBP26.04■■□□□ 1.76
CCDC12-207ENST00000494655 LDHAL6AQ6ZMR3 332 aa26.04■■□□□ 1.76
CCDC12-207ENST00000494655 GPR101Q96P66 508 aaPredicted RBP26.04■■□□□ 1.76
CCDC12-207ENST00000494655 LEMD3Q9Y2U8 911 aa26.04■■□□□ 1.76
CCDC12-207ENST00000494655 CHRNDQ07001 517 aa26.03■■□□□ 1.76
CCDC12-207ENST00000494655 CXCL9Q07325 125 aa26.03■■□□□ 1.76
CCDC12-207ENST00000494655 FSTL1Q12841 308 aa26.03■■□□□ 1.76
CCDC12-207ENST00000494655 INTS3Q68E01 1043 aaKnown RBP26.03■■□□□ 1.76
CCDC12-207ENST00000494655 FTSJ3Q8IY81 847 aaKnown RBP26.03■■□□□ 1.76
CCDC12-207ENST00000494655 KAZALD1Q96I82 304 aa26.03■■□□□ 1.76
CCDC12-207ENST00000494655 POTECB2RU33 542 aa26.02■■□□□ 1.76
CCDC12-207ENST00000494655 RAD17O75943 681 aa26.02■■□□□ 1.76
CCDC12-207ENST00000494655 DOK7Q18PE1 504 aa26.02■■□□□ 1.76
CCDC12-207ENST00000494655 ZNF804BA4D1E1 1349 aa26.01■■□□□ 1.75
CCDC12-207ENST00000494655 GNAI3P08754 354 aa26.01■■□□□ 1.75
CCDC12-207ENST00000494655 EPHX2P34913 555 aa26.01■■□□□ 1.75
CCDC12-207ENST00000494655 PNMA8AQ86V59 439 aaPredicted RBP26.01■■□□□ 1.75
CCDC12-207ENST00000494655 TAF1DQ9H5J8 278 aaPredicted RBP26.01■■□□□ 1.75
CCDC12-207ENST00000494655 ANKRD44Q8N8A2 993 aa26■■□□□ 1.75
CCDC12-207ENST00000494655 CLUAP1Q96AJ1 413 aa26■■□□□ 1.75
CCDC12-207ENST00000494655 ZNF594Q96JF6 807 aaPredicted RBP26■■□□□ 1.75
CCDC12-207ENST00000494655 YDJCA8MPS7 323 aa25.99■■□□□ 1.75
CCDC12-207ENST00000494655 EAPPQ56P03 285 aaPredicted RBP25.99■■□□□ 1.75
CCDC12-207ENST00000494655 PSME4Q14997 1843 aa25.99■■□□□ 1.75
CCDC12-207ENST00000494655 GMPSP49915 693 aaPredicted RBP25.97■■□□□ 1.75
CCDC12-207ENST00000494655 SCNN1DP51172 638 aa25.97■■□□□ 1.75
CCDC12-207ENST00000494655 LDHDQ86WU2 507 aa25.97■■□□□ 1.75
CCDC12-207ENST00000494655 MEIS3Q99687 375 aa25.97■■□□□ 1.75
CCDC12-207ENST00000494655 MROH5Q6ZUA9 1318 aa25.96■■□□□ 1.75
CCDC12-207ENST00000494655 HSPA6P17066 643 aa25.96■■□□□ 1.75
CCDC12-207ENST00000494655 PODNQ7Z5L7 613 aa25.96■■□□□ 1.75
CCDC12-207ENST00000494655 GPRC5DQ9NZD1 345 aa25.96■■□□□ 1.75
CCDC12-207ENST00000494655 LRRFIP2Q9Y608 721 aaKnown RBP25.96■■□□□ 1.75
CCDC12-207ENST00000494655 RPS12P25398 132 aaKnown RBP25.95■■□□□ 1.74
CCDC12-207ENST00000494655 CHADLQ6NUI6 762 aa25.95■■□□□ 1.74
CCDC12-207ENST00000494655 DZIP1LQ8IYY4 767 aaKnown RBP25.95■■□□□ 1.74
CCDC12-207ENST00000494655 COA1Q9GZY4 146 aa25.95■■□□□ 1.74
CCDC12-207ENST00000494655 CLEC11AQ9Y240 323 aa25.95■■□□□ 1.74
CCDC12-207ENST00000494655 SCN9AQ15858 1988 aa25.95■■□□□ 1.74
CCDC12-207ENST00000494655 PSMD14O00487 310 aa25.94■■□□□ 1.74
CCDC12-207ENST00000494655 PLIN1O60240 522 aa25.94■■□□□ 1.74
CCDC12-207ENST00000494655 TAF5LO75529 589 aa25.94■■□□□ 1.74
CCDC12-207ENST00000494655 MS4A1P11836 297 aa25.94■■□□□ 1.74
CCDC12-207ENST00000494655 HELBQ8NG08 1087 aaPredicted RBP25.94■■□□□ 1.74
CCDC12-207ENST00000494655 ADAMTSL1Q8N6G6 1762 aa25.93■■□□□ 1.74
CCDC12-207ENST00000494655 ADARB2Q9NS39 739 aaKnown RBP25.93■■□□□ 1.74
CCDC12-207ENST00000494655 METTL24Q5JXM2 366 aa25.92■■□□□ 1.74
CCDC12-207ENST00000494655 USP50Q70EL3 339 aaPredicted RBP25.92■■□□□ 1.74
CCDC12-207ENST00000494655 ZNF804AQ7Z570 1209 aa25.92■■□□□ 1.74
CCDC12-207ENST00000494655 TMEM57Q8N5G2 664 aa25.92■■□□□ 1.74
CCDC12-207ENST00000494655 TNNQ9UQP3 1299 aa25.92■■□□□ 1.74
CCDC12-207ENST00000494655 H7C1D1 291 aa25.91■■□□□ 1.74
CCDC12-207ENST00000494655 EPS15P42566 896 aa25.91■■□□□ 1.74
CCDC12-207ENST00000494655 ITPRIPQ8IWB1 547 aa25.91■■□□□ 1.74
CCDC12-207ENST00000494655 DPF2Q92785 391 aa25.91■■□□□ 1.74
CCDC12-207ENST00000494655 FBXW7Q969H0 707 aa25.91■■□□□ 1.74
CCDC12-207ENST00000494655 RCAN3Q9UKA8 241 aa25.91■■□□□ 1.74
CCDC12-207ENST00000494655 USP17L3A6NCW0 530 aa25.9■■□□□ 1.74
CCDC12-207ENST00000494655 USP17L4A6NCW7 530 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms