RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 YBX3P16989 372 aaKnown RBP eCLIP18.08■□□□□ 0.48
BRCA1-223ENST00000494123 PUS3Q9BZE2 481 aaKnown RBP18.08■□□□□ 0.48
BRCA1-223ENST00000494123 PCDHB15Q9Y5E8 787 aa18.08■□□□□ 0.48
BRCA1-223ENST00000494123 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 LRRC24Q50LG9 513 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 SLC51AQ86UW1 340 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 SIRT2Q8IXJ6 389 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 RTKN2Q8IZC4 609 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 FBXO3Q9UK99 471 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 MINPP1Q9UNW1 487 aa18.07■□□□□ 0.48
BRCA1-223ENST00000494123 NSFL1CQ9UNZ2 370 aaKnown RBP18.07■□□□□ 0.48
BRCA1-223ENST00000494123 SURF6O75683 361 aaKnown RBP18.06■□□□□ 0.48
BRCA1-223ENST00000494123 G3BP1Q13283 466 aaKnown RBP eCLIP18.06■□□□□ 0.48
BRCA1-223ENST00000494123 OS9Q13438 667 aaPredicted RBP18.06■□□□□ 0.48
BRCA1-223ENST00000494123 DPP8Q6V1X1 898 aaPredicted RBP18.06■□□□□ 0.48
BRCA1-223ENST00000494123 MPNDQ8N594 471 aa18.06■□□□□ 0.48
BRCA1-223ENST00000494123 ANKRD2Q9GZV1 360 aa18.06■□□□□ 0.48
BRCA1-223ENST00000494123 MROH5Q6ZUA9 1318 aa18.06■□□□□ 0.48
BRCA1-223ENST00000494123 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 CIAO1O76071 339 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 GPSM2P81274 684 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 CHRNDQ07001 517 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 ARHGAP27Q6ZUM4 889 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 XDHP47989 1333 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 IL15P40933 162 aaPredicted RBP18.05■□□□□ 0.48
BRCA1-223ENST00000494123 RIPOR2Q9Y4F9 1068 aa18.05■□□□□ 0.48
BRCA1-223ENST00000494123 A0A1B0GUL6 1792 aa18.04■□□□□ 0.48
BRCA1-223ENST00000494123 FER1L6Q2WGJ9 1857 aa18.04■□□□□ 0.48
BRCA1-223ENST00000494123 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
BRCA1-223ENST00000494123 KCNJ4P48050 445 aa18.03■□□□□ 0.48
BRCA1-223ENST00000494123 HSP90AB4PQ58FF6 505 aa18.03■□□□□ 0.48
BRCA1-223ENST00000494123 ATG9AQ7Z3C6 839 aa18.03■□□□□ 0.48
BRCA1-223ENST00000494123 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
BRCA1-223ENST00000494123 GGA1Q9UJY5 639 aa18.03■□□□□ 0.48
BRCA1-223ENST00000494123 EXOC6BQ9Y2D4 811 aa18.03■□□□□ 0.48
BRCA1-223ENST00000494123 C6orf229H3BNL8 230 aa18.02■□□□□ 0.48
BRCA1-223ENST00000494123 TAF5LO75529 589 aa18.02■□□□□ 0.48
BRCA1-223ENST00000494123 UFL1O94874 794 aa18.02■□□□□ 0.48
BRCA1-223ENST00000494123 FKBP4Q02790 459 aaKnown RBP eCLIP18.02■□□□□ 0.48
BRCA1-223ENST00000494123 SUPT20HQ8NEM7 779 aa18.02■□□□□ 0.48
BRCA1-223ENST00000494123 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
BRCA1-223ENST00000494123 CEP126Q9P2H0 1117 aa18.02■□□□□ 0.48
BRCA1-223ENST00000494123 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
BRCA1-223ENST00000494123 PSMD1Q99460 953 aa18.01■□□□□ 0.47
BRCA1-223ENST00000494123 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
BRCA1-223ENST00000494123 SNED1Q8TER0 1413 aa18.01■□□□□ 0.47
BRCA1-223ENST00000494123 LTBP1Q14766 1721 aa18.01■□□□□ 0.47
BRCA1-223ENST00000494123 GOLGB1Q14789 3259 aaKnown RBP18.01■□□□□ 0.47
BRCA1-223ENST00000494123 ATP2B4P23634 1241 aa18.01■□□□□ 0.47
BRCA1-223ENST00000494123 ERC1Q8IUD2 1116 aa18.01■□□□□ 0.47
BRCA1-223ENST00000494123 TBC1D16Q8TBP0 767 aa18.01■□□□□ 0.47
BRCA1-223ENST00000494123 LEMD3Q9Y2U8 911 aa18.01■□□□□ 0.47
BRCA1-223ENST00000494123 DUOX1Q9NRD9 1551 aa18■□□□□ 0.47
BRCA1-223ENST00000494123 ZNF804BA4D1E1 1349 aa18■□□□□ 0.47
BRCA1-223ENST00000494123 APBB1O00213 710 aa18■□□□□ 0.47
BRCA1-223ENST00000494123 NFKBIEO00221 500 aa18■□□□□ 0.47
BRCA1-223ENST00000494123 PDE8BO95263 885 aa18■□□□□ 0.47
BRCA1-223ENST00000494123 RASSF7Q02833 373 aa18■□□□□ 0.47
BRCA1-223ENST00000494123 HDAC1Q13547 482 aaPredicted RBP18■□□□□ 0.47
BRCA1-223ENST00000494123 EYA3Q99504 573 aa18■□□□□ 0.47
BRCA1-223ENST00000494123 LTBP3Q9NS15 1303 aa17.99■□□□□ 0.47
BRCA1-223ENST00000494123 TFCP2Q12800 502 aa17.99■□□□□ 0.47
BRCA1-223ENST00000494123 RTFDC1Q9BY42 306 aaPredicted RBP17.99■□□□□ 0.47
BRCA1-223ENST00000494123 POLLQ9UGP5 575 aa17.99■□□□□ 0.47
BRCA1-223ENST00000494123 RAB11FIP3O75154 756 aa17.98■□□□□ 0.47
BRCA1-223ENST00000494123 PUM3Q15397 648 aaKnown RBP17.98■□□□□ 0.47
BRCA1-223ENST00000494123 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
BRCA1-223ENST00000494123 VGLL2Q8N8G2 317 aa17.98■□□□□ 0.47
BRCA1-223ENST00000494123 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
BRCA1-223ENST00000494123 ZNF277Q9NRM2 450 aaPredicted RBP17.98■□□□□ 0.47
BRCA1-223ENST00000494123 SASH1O94885 1247 aa17.98■□□□□ 0.47
BRCA1-223ENST00000494123 UBE4AQ14139 1066 aa17.98■□□□□ 0.47
BRCA1-223ENST00000494123 AKAP2Q9Y2D5 859 aa17.98■□□□□ 0.47
BRCA1-223ENST00000494123 PPIP5K2O43314 1243 aa17.97■□□□□ 0.47
BRCA1-223ENST00000494123 ATP2B3Q16720 1220 aa17.97■□□□□ 0.47
BRCA1-223ENST00000494123 KIF1BPQ96EK5 621 aa17.97■□□□□ 0.47
BRCA1-223ENST00000494123 GPR101Q96P66 508 aaPredicted RBP17.97■□□□□ 0.47
BRCA1-223ENST00000494123 ZC3H12CQ9C0D7 883 aaKnown RBP17.97■□□□□ 0.47
BRCA1-223ENST00000494123 CCDC88AQ3V6T2 1871 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 SNAP23O00161 211 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 RIMBP2O15034 1052 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 LMNB1P20700 586 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 IARSP41252 1262 aaKnown RBP17.96■□□□□ 0.47
BRCA1-223ENST00000494123 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 RHPN1Q8TCX5 695 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 GCC1Q96CN9 775 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 MED23Q9ULK4 1368 aa17.96■□□□□ 0.47
BRCA1-223ENST00000494123 WTIPA6NIX2 430 aaPredicted RBP17.95■□□□□ 0.46
BRCA1-223ENST00000494123 G3V3G9 751 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
BRCA1-223ENST00000494123 SLC5A1P13866 664 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 AOC3Q16853 763 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 LARGE2Q8N3Y3 721 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 LPIN2Q92539 896 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 VPS33BQ9H267 617 aa17.95■□□□□ 0.46
BRCA1-223ENST00000494123 IGHDP01880 384 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms