RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TMX4Q9H1E5 349 aaPredicted RBP16.13■□□□□ 0.17
HSPG2-212ENST00000493940 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 PASKQ96RG2 1323 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
HSPG2-212ENST00000493940 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
HSPG2-212ENST00000493940 MAP1SQ66K74 1059 aaPredicted RBP16.12■□□□□ 0.17
HSPG2-212ENST00000493940 LDHDQ86WU2 507 aa16.12■□□□□ 0.17
HSPG2-212ENST00000493940 CREBZFQ9NS37 354 aa16.12■□□□□ 0.17
HSPG2-212ENST00000493940 CSF1RP07333 972 aa16.11■□□□□ 0.17
HSPG2-212ENST00000493940 GMPSP49915 693 aaPredicted RBP16.11■□□□□ 0.17
HSPG2-212ENST00000493940 EPHA10Q5JZY3 1008 aa16.11■□□□□ 0.17
HSPG2-212ENST00000493940 TRMT2AQ8IZ69 625 aaKnown RBP16.11■□□□□ 0.17
HSPG2-212ENST00000493940 MRPL50Q8N5N7 158 aaKnown RBP16.11■□□□□ 0.17
HSPG2-212ENST00000493940 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
HSPG2-212ENST00000493940 GPRC5DQ9NZD1 345 aa16.11■□□□□ 0.17
HSPG2-212ENST00000493940 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
HSPG2-212ENST00000493940 RTL9Q8NET4 1388 aa16.11■□□□□ 0.17
HSPG2-212ENST00000493940 CCER2I3L3R5 266 aa16.1■□□□□ 0.17
HSPG2-212ENST00000493940 HIRAP54198 1017 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-212ENST00000493940 FOXO4P98177 505 aa16.1■□□□□ 0.17
HSPG2-212ENST00000493940 CIAPIN1Q6FI81 312 aa16.1■□□□□ 0.17
HSPG2-212ENST00000493940 PLA2G12BQ9BX93 195 aa16.1■□□□□ 0.17
HSPG2-212ENST00000493940 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
HSPG2-212ENST00000493940 PSMD14O00487 310 aa16.09■□□□□ 0.17
HSPG2-212ENST00000493940 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
HSPG2-212ENST00000493940 CNTROBQ8N137 903 aa16.09■□□□□ 0.17
HSPG2-212ENST00000493940 MINPP1Q9UNW1 487 aa16.09■□□□□ 0.17
HSPG2-212ENST00000493940 ECE2O60344 883 aa16.08■□□□□ 0.16
HSPG2-212ENST00000493940 UFL1O94874 794 aa16.08■□□□□ 0.16
HSPG2-212ENST00000493940 EGFRP00533 1210 aa16.08■□□□□ 0.16
HSPG2-212ENST00000493940 FAM161AQ3B820 660 aa16.08■□□□□ 0.16
HSPG2-212ENST00000493940 MIER1Q8N108 512 aa16.08■□□□□ 0.16
HSPG2-212ENST00000493940 SSH1Q8WYL5 1049 aa16.08■□□□□ 0.16
HSPG2-212ENST00000493940 KAZALD1Q96I82 304 aa16.08■□□□□ 0.16
HSPG2-212ENST00000493940 E9PSI1 815 aa16.07■□□□□ 0.16
HSPG2-212ENST00000493940 HSP90B1P14625 803 aaKnown RBP16.07■□□□□ 0.16
HSPG2-212ENST00000493940 ITGA6P23229 1130 aa16.07■□□□□ 0.16
HSPG2-212ENST00000493940 PNMA8AQ86V59 439 aaPredicted RBP16.07■□□□□ 0.16
HSPG2-212ENST00000493940 TXNRD3Q86VQ6 643 aa16.07■□□□□ 0.16
HSPG2-212ENST00000493940 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
HSPG2-212ENST00000493940 BCL2L13Q9BXK5 485 aa16.07■□□□□ 0.16
HSPG2-212ENST00000493940 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
HSPG2-212ENST00000493940 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
HSPG2-212ENST00000493940 SNAP23O00161 211 aa16.06■□□□□ 0.16
HSPG2-212ENST00000493940 TRAF5O00463 557 aa16.06■□□□□ 0.16
HSPG2-212ENST00000493940 LMOD1P29536 600 aaPredicted RBP16.06■□□□□ 0.16
HSPG2-212ENST00000493940 SLC4A10Q6U841 1118 aa16.06■□□□□ 0.16
HSPG2-212ENST00000493940 DLK2Q6UY11 383 aa16.06■□□□□ 0.16
HSPG2-212ENST00000493940 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
HSPG2-212ENST00000493940 CNOT7Q9UIV1 285 aaKnown RBP16.06■□□□□ 0.16
HSPG2-212ENST00000493940 GGA1Q9UJY5 639 aa16.06■□□□□ 0.16
HSPG2-212ENST00000493940 XDHP47989 1333 aa16.05■□□□□ 0.16
HSPG2-212ENST00000493940 KLRK1P26718 216 aa16.05■□□□□ 0.16
HSPG2-212ENST00000493940 TNIP1Q15025 636 aa16.05■□□□□ 0.16
HSPG2-212ENST00000493940 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-212ENST00000493940 CDC5LQ99459 802 aaKnown RBP16.05■□□□□ 0.16
HSPG2-212ENST00000493940 NBPF7P0C2Y1 421 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-212ENST00000493940 SAMD7Q7Z3H4 446 aa16.04■□□□□ 0.16
HSPG2-212ENST00000493940 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-212ENST00000493940 EYA3Q99504 573 aa16.04■□□□□ 0.16
HSPG2-212ENST00000493940 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
HSPG2-212ENST00000493940 ADARB2Q9NS39 739 aaKnown RBP16.04■□□□□ 0.16
HSPG2-212ENST00000493940 CNTNAP1P78357 1384 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 GRM8O00222 908 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 VIL1P09327 827 aaKnown RBP16.03■□□□□ 0.16
HSPG2-212ENST00000493940 ATP2B4P23634 1241 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 CCT4P50991 539 aaKnown RBP16.03■□□□□ 0.16
HSPG2-212ENST00000493940 CST9Q5W186 159 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 LMBR1LQ6UX01 489 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 MICALL2Q8IY33 904 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 SUCLG2Q96I99 432 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 PGAP2Q9UHJ9 254 aa16.03■□□□□ 0.16
HSPG2-212ENST00000493940 IRS2Q9Y4H2 1338 aa16.02■□□□□ 0.16
HSPG2-212ENST00000493940 HELBQ8NG08 1087 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-212ENST00000493940 MXD3Q9BW11 206 aa16.02■□□□□ 0.16
HSPG2-212ENST00000493940 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
HSPG2-212ENST00000493940 PRDM10Q9NQV6 1147 aa16.02■□□□□ 0.16
HSPG2-212ENST00000493940 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-212ENST00000493940 TMEM88BA6NKF7 163 aa16.01■□□□□ 0.15
HSPG2-212ENST00000493940 FOXN1O15353 648 aa16.01■□□□□ 0.15
HSPG2-212ENST00000493940 TAF5LO75529 589 aa16.01■□□□□ 0.15
HSPG2-212ENST00000493940 ALDH1L1O75891 902 aa16.01■□□□□ 0.15
HSPG2-212ENST00000493940 TBC1D10BQ4KMP7 808 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-212ENST00000493940 DPF2Q92785 391 aa16.01■□□□□ 0.15
HSPG2-212ENST00000493940 GMLQ99445 158 aa16.01■□□□□ 0.15
HSPG2-212ENST00000493940 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-212ENST00000493940 UTYO14607 1347 aa16■□□□□ 0.15
HSPG2-212ENST00000493940 CHRNDQ07001 517 aa16■□□□□ 0.15
HSPG2-212ENST00000493940 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
HSPG2-212ENST00000493940 MED23Q9ULK4 1368 aa16■□□□□ 0.15
HSPG2-212ENST00000493940 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
HSPG2-212ENST00000493940 IGHMBP2P38935 993 aaKnown RBP15.99■□□□□ 0.15
HSPG2-212ENST00000493940 VEGFBP49765 207 aa15.99■□□□□ 0.15
HSPG2-212ENST00000493940 RBM26Q5T8P6 1007 aaKnown RBP15.99■□□□□ 0.15
HSPG2-212ENST00000493940 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
HSPG2-212ENST00000493940 C9orf78Q9NZ63 289 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-212ENST00000493940 H7C1D1 291 aa15.98■□□□□ 0.15
HSPG2-212ENST00000493940 CTCFP49711 727 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-212ENST00000493940 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
HSPG2-212ENST00000493940 MPHOSPH8Q99549 860 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms