RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CNTNAP1P78357 1384 aa10.43□□□□□ -0.74
HDAC6-234ENST00000493923 GMPSP49915 693 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-234ENST00000493923 HIRAP54198 1017 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-234ENST00000493923 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
HDAC6-234ENST00000493923 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-234ENST00000493923 TRPM4Q8TD43 1214 aa10.43□□□□□ -0.74
HDAC6-234ENST00000493923 ZNRF3Q9ULT6 936 aa10.43□□□□□ -0.74
HDAC6-234ENST00000493923 RIMBP2O15034 1052 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 ANP32CO43423 234 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 VEGFBP49765 207 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 ZBTB38Q8NAP3 1195 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-234ENST00000493923 METTL22Q9BUU2 404 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-234ENST00000493923 DBNDD1Q9H9R9 158 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 GPRC5DQ9NZD1 345 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 MAP3K2Q9Y2U5 619 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 TRPM7Q96QT4 1865 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 SPEF2Q9C093 1822 aa10.42□□□□□ -0.74
HDAC6-234ENST00000493923 TMEM88BA6NKF7 163 aa10.41□□□□□ -0.74
HDAC6-234ENST00000493923 EGFRP00533 1210 aa10.41□□□□□ -0.74
HDAC6-234ENST00000493923 PCCAP05165 728 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-234ENST00000493923 DOK7Q18PE1 504 aa10.41□□□□□ -0.74
HDAC6-234ENST00000493923 GRIPAP1Q4V328 841 aa10.41□□□□□ -0.74
HDAC6-234ENST00000493923 MRS2Q9HD23 443 aa10.41□□□□□ -0.74
HDAC6-234ENST00000493923 RTL9Q8NET4 1388 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 PI4KAP2A4QPH2 592 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 PSMD14O00487 310 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 FOXN1O15353 648 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 LMOD1P29536 600 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 RPS8P62241 208 aaKnown RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 CALD1Q05682 793 aaKnown RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 CCDC27Q2M243 656 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 CWF19L2Q2TBE0 894 aaKnown RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 CCDC30Q5VVM6 783 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 CST9Q5W186 159 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 CIAPIN1Q6FI81 312 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 PNMA8AQ86V59 439 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 PI4KAP1Q8N8J0 262 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 CCDC191Q8NCU4 936 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.74
HDAC6-234ENST00000493923 IPO9Q96P70 1041 aaKnown RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 GLIS2Q9BZE0 524 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
HDAC6-234ENST00000493923 MYH3P11055 1940 aa10.39□□□□□ -0.75
HDAC6-234ENST00000493923 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
HDAC6-234ENST00000493923 TWISTNBQ3B726 338 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-234ENST00000493923 KSR2Q6VAB6 950 aa10.39□□□□□ -0.75
HDAC6-234ENST00000493923 SUPT20HQ8NEM7 779 aa10.39□□□□□ -0.75
HDAC6-234ENST00000493923 VPS33BQ9H267 617 aa10.39□□□□□ -0.75
HDAC6-234ENST00000493923 CWC25Q9NXE8 425 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-234ENST00000493923 ASTN2O75129 1339 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-234ENST00000493923 RASSF10A6NK89 507 aa10.38□□□□□ -0.75
HDAC6-234ENST00000493923 ECE2O60344 883 aa10.38□□□□□ -0.75
HDAC6-234ENST00000493923 PDE8AO60658 829 aa10.38□□□□□ -0.75
HDAC6-234ENST00000493923 NBR1Q14596 966 aa10.38□□□□□ -0.75
HDAC6-234ENST00000493923 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
HDAC6-234ENST00000493923 USP50Q70EL3 339 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-234ENST00000493923 SAMD7Q7Z3H4 446 aa10.38□□□□□ -0.75
HDAC6-234ENST00000493923 SP7Q8TDD2 431 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-234ENST00000493923 ADARB2Q9NS39 739 aaKnown RBP10.38□□□□□ -0.75
HDAC6-234ENST00000493923 CNOT7Q9UIV1 285 aaKnown RBP10.38□□□□□ -0.75
HDAC6-234ENST00000493923 ZNF646O15015 1829 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-234ENST00000493923 IL16Q14005 1332 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 NEURL1BA8MQ27 555 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 VAMP4O75379 141 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 CASP7P55210 303 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 EXOSC9Q06265 439 aaKnown RBP10.37□□□□□ -0.75
HDAC6-234ENST00000493923 TMC4Q7Z404 712 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 TTLL11Q8NHH1 800 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-234ENST00000493923 GREM2Q9H772 168 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 PGAP2Q9UHJ9 254 aa10.37□□□□□ -0.75
HDAC6-234ENST00000493923 CDHR2Q9BYE9 1310 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 PSME4Q14997 1843 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 F6X3S4 739 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 H7C1W4 665 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 HAX1O00165 279 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 UFL1O94874 794 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 CTSWP56202 376 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 FLIIQ13045 1269 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 TNIP1Q15025 636 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 DEFB115Q30KQ5 88 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 TBC1D10BQ4KMP7 808 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-234ENST00000493923 CYP4F22Q6NT55 531 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 UBE3BQ7Z3V4 1068 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 IL27Q8NEV9 243 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 PODXL2Q9NZ53 605 aa10.36□□□□□ -0.75
HDAC6-234ENST00000493923 ABT1Q9ULW3 272 aaKnown RBP10.36□□□□□ -0.75
HDAC6-234ENST00000493923 CACNA1FO60840 1977 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 WDR33Q9C0J8 1336 aaKnown RBP10.35□□□□□ -0.75
HDAC6-234ENST00000493923 AOC2O75106 756 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 DDX58O95786 925 aaKnown RBP10.35□□□□□ -0.75
HDAC6-234ENST00000493923 CCDC152Q4G0S7 254 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 USP48Q86UV5 1035 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 TXNRD3Q86VQ6 643 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms