RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 ZBTB38Q8NAP3 1195 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 SUPT20HQ8NEM7 779 aa13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 CAPNS2Q96L46 248 aa13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 SCAF8Q9UPN6 1271 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 CELF2O95319 508 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 PGAP2Q9UHJ9 254 aa13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
SOX2-OT-215ENST00000493521 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
SOX2-OT-215ENST00000493521 ADM5C9JUS6 153 aa13.11□□□□□ -0.31
SOX2-OT-215ENST00000493521 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-215ENST00000493521 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
SOX2-OT-215ENST00000493521 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
SOX2-OT-215ENST00000493521 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
SOX2-OT-215ENST00000493521 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
SOX2-OT-215ENST00000493521 UFL1O94874 794 aa13.1□□□□□ -0.31
SOX2-OT-215ENST00000493521 KCNA4P22459 653 aa13.1□□□□□ -0.31
SOX2-OT-215ENST00000493521 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
SOX2-OT-215ENST00000493521 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
SOX2-OT-215ENST00000493521 TMX4Q9H1E5 349 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-215ENST00000493521 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-215ENST00000493521 KLRK1P26718 216 aa13.09□□□□□ -0.31
SOX2-OT-215ENST00000493521 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
SOX2-OT-215ENST00000493521 GREM2Q9H772 168 aa13.09□□□□□ -0.31
SOX2-OT-215ENST00000493521 SNAP23O00161 211 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 PDE8AO60658 829 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 TNIP1Q15025 636 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 TXNRD3Q86VQ6 643 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 PODXL2Q9NZ53 605 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 ZNF521Q96K83 1311 aa13.08□□□□□ -0.32
SOX2-OT-215ENST00000493521 PSME4Q14997 1843 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 NEURL1BA8MQ27 555 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 CASP7P55210 303 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 CTSWP56202 376 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 TWISTNBQ3B726 338 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 TMC4Q7Z404 712 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 MYH3P11055 1940 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
SOX2-OT-215ENST00000493521 VIL1P09327 827 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-215ENST00000493521 UBE3BQ7Z3V4 1068 aa13.06□□□□□ -0.32
SOX2-OT-215ENST00000493521 DPF2Q92785 391 aa13.06□□□□□ -0.32
SOX2-OT-215ENST00000493521 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
SOX2-OT-215ENST00000493521 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
SOX2-OT-215ENST00000493521 CDHR2Q9BYE9 1310 aa13.06□□□□□ -0.32
SOX2-OT-215ENST00000493521 F6X3S4 739 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 H7C1D1 291 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 CCDC152Q4G0S7 254 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 CDC37L1Q7L3B6 337 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 GMLQ99445 158 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 GGA3Q9NZ52 723 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
SOX2-OT-215ENST00000493521 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 H7C1W4 665 aa13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 CCDC27Q2M243 656 aa13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-215ENST00000493521 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 A0A1B0GUL6 1792 aa13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 VAMP4O75379 141 aa13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 FLIIQ13045 1269 aa13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 EPHA10Q5JZY3 1008 aa13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 RSBN1LQ6PCB5 846 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 EYA3Q99504 573 aa13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-215ENST00000493521 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-215ENST00000493521 HUNKP57058 714 aa13.02□□□□□ -0.33
SOX2-OT-215ENST00000493521 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-215ENST00000493521 MAP2K1Q02750 393 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-215ENST00000493521 SCARF1Q14162 830 aa13.02□□□□□ -0.33
SOX2-OT-215ENST00000493521 GCKRQ14397 625 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms