RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZNF609O15014 1411 aa23.02■■□□□ 1.28
NUP50-218ENST00000493456 SLC10A3P09131 477 aa23.02■■□□□ 1.28
NUP50-218ENST00000493456 TRIM28Q13263 835 aaKnown RBP23.02■■□□□ 1.28
NUP50-218ENST00000493456 DOK7Q18PE1 504 aa23.02■■□□□ 1.28
NUP50-218ENST00000493456 RBM26Q5T8P6 1007 aaKnown RBP23.02■■□□□ 1.28
NUP50-218ENST00000493456 PODXL2Q9NZ53 605 aa23.02■■□□□ 1.28
NUP50-218ENST00000493456 COL4A1P02462 1669 aa23.02■■□□□ 1.28
NUP50-218ENST00000493456 ATP5J2-PTCD1G3V325 749 aa23.01■■□□□ 1.27
NUP50-218ENST00000493456 IRS4O14654 1257 aaPredicted RBP23.01■■□□□ 1.27
NUP50-218ENST00000493456 VIL1P09327 827 aaKnown RBP23.01■■□□□ 1.27
NUP50-218ENST00000493456 RPS8P62241 208 aaKnown RBP23.01■■□□□ 1.27
NUP50-218ENST00000493456 RALBP1Q15311 655 aa23.01■■□□□ 1.27
NUP50-218ENST00000493456 REM2Q8IYK8 340 aaPredicted RBP23.01■■□□□ 1.27
NUP50-218ENST00000493456 ZC3H12CQ9C0D7 883 aaKnown RBP23.01■■□□□ 1.27
NUP50-218ENST00000493456 KCNQ5Q9NR82 932 aa23.01■■□□□ 1.27
NUP50-218ENST00000493456 RNF186Q9NXI6 227 aa23.01■■□□□ 1.27
NUP50-218ENST00000493456 GGA3Q9NZ52 723 aa23.01■■□□□ 1.27
NUP50-218ENST00000493456 HSP90B1P14625 803 aaKnown RBP23■■□□□ 1.27
NUP50-218ENST00000493456 HYPKQ9NX55 129 aa23■■□□□ 1.27
NUP50-218ENST00000493456 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
NUP50-218ENST00000493456 POLR2AP24928 1970 aaKnown RBP23■■□□□ 1.27
NUP50-218ENST00000493456 TRPA1O75762 1119 aa22.99■■□□□ 1.27
NUP50-218ENST00000493456 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
NUP50-218ENST00000493456 AKAP11Q9UKA4 1901 aa22.98■■□□□ 1.27
NUP50-218ENST00000493456 G3V3G9 751 aa22.98■■□□□ 1.27
NUP50-218ENST00000493456 DCAF8Q5TAQ9 597 aa22.98■■□□□ 1.27
NUP50-218ENST00000493456 SCN9AQ15858 1988 aa22.98■■□□□ 1.27
NUP50-218ENST00000493456 UFL1O94874 794 aa22.97■■□□□ 1.27
NUP50-218ENST00000493456 ZNF280AP59817 542 aaPredicted RBP22.97■■□□□ 1.27
NUP50-218ENST00000493456 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
NUP50-218ENST00000493456 ZBTB38Q8NAP3 1195 aaPredicted RBP22.97■■□□□ 1.27
NUP50-218ENST00000493456 AGBL3Q8NEM8 1001 aa22.97■■□□□ 1.27
NUP50-218ENST00000493456 CDCA5Q96FF9 252 aa22.97■■□□□ 1.27
NUP50-218ENST00000493456 ANKIB1Q9P2G1 1089 aa22.97■■□□□ 1.27
NUP50-218ENST00000493456 GGA1Q9UJY5 639 aa22.97■■□□□ 1.27
NUP50-218ENST00000493456 TRIM35Q9UPQ4 493 aa22.97■■□□□ 1.27
NUP50-218ENST00000493456 FKBP1BP68106 108 aa22.96■■□□□ 1.27
NUP50-218ENST00000493456 CCDC146Q8IYE0 955 aa22.96■■□□□ 1.27
NUP50-218ENST00000493456 CSRNP1Q96S65 589 aa22.96■■□□□ 1.27
NUP50-218ENST00000493456 PDE4DIPQ5VU43 2346 aa22.96■■□□□ 1.27
NUP50-218ENST00000493456 RSBN1LQ6PCB5 846 aaPredicted RBP22.95■■□□□ 1.26
NUP50-218ENST00000493456 CTU1Q7Z7A3 348 aaKnown RBP22.95■■□□□ 1.26
NUP50-218ENST00000493456 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
NUP50-218ENST00000493456 PAPPA2Q9BXP8 1791 aa22.95■■□□□ 1.26
NUP50-218ENST00000493456 ASTN2O75129 1339 aaPredicted RBP22.94■■□□□ 1.26
NUP50-218ENST00000493456 PITPNM2Q9BZ72 1349 aa22.94■■□□□ 1.26
NUP50-218ENST00000493456 GOLGA2Q08379 1002 aa22.94■■□□□ 1.26
NUP50-218ENST00000493456 ANGEL2Q5VTE6 544 aaKnown RBP22.94■■□□□ 1.26
NUP50-218ENST00000493456 RASAL3Q86YV0 1011 aa22.94■■□□□ 1.26
NUP50-218ENST00000493456 PSME4Q14997 1843 aa22.94■■□□□ 1.26
NUP50-218ENST00000493456 SOX10P56693 466 aa22.93■■□□□ 1.26
NUP50-218ENST00000493456 SCARF1Q14162 830 aa22.93■■□□□ 1.26
NUP50-218ENST00000493456 CCDC152Q4G0S7 254 aa22.93■■□□□ 1.26
NUP50-218ENST00000493456 DUSP27Q5VZP5 1158 aa22.93■■□□□ 1.26
NUP50-218ENST00000493456 RIC3Q7Z5B4 369 aa22.93■■□□□ 1.26
NUP50-218ENST00000493456 SEC31BQ9NQW1 1179 aa22.93■■□□□ 1.26
NUP50-218ENST00000493456 MYOZ2Q9NPC6 264 aa22.91■■□□□ 1.26
NUP50-218ENST00000493456 XDHP47989 1333 aa22.9■■□□□ 1.26
NUP50-218ENST00000493456 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
NUP50-218ENST00000493456 USP17L8P0C7I0 530 aa22.9■■□□□ 1.26
NUP50-218ENST00000493456 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
NUP50-218ENST00000493456 CCDC191Q8NCU4 936 aa22.9■■□□□ 1.26
NUP50-218ENST00000493456 GMLQ99445 158 aa22.9■■□□□ 1.26
NUP50-218ENST00000493456 PDE8AO60658 829 aa22.89■■□□□ 1.25
NUP50-218ENST00000493456 PCCAP05165 728 aaPredicted RBP22.89■■□□□ 1.25
NUP50-218ENST00000493456 PODNQ7Z5L7 613 aa22.89■■□□□ 1.25
NUP50-218ENST00000493456 USP17L3A6NCW0 530 aa22.88■■□□□ 1.25
NUP50-218ENST00000493456 USP17L4A6NCW7 530 aa22.88■■□□□ 1.25
NUP50-218ENST00000493456 PKN2Q16513 984 aaKnown RBP22.88■■□□□ 1.25
NUP50-218ENST00000493456 USP17L1Q7RTZ2 530 aa22.88■■□□□ 1.25
NUP50-218ENST00000493456 MBIPQ9NS73 344 aa22.88■■□□□ 1.25
NUP50-218ENST00000493456 ATP2B4P23634 1241 aa22.87■■□□□ 1.25
NUP50-218ENST00000493456 ANKRD18AQ8IVF6 992 aa22.87■■□□□ 1.25
NUP50-218ENST00000493456 MYD88Q99836 296 aa22.87■■□□□ 1.25
NUP50-218ENST00000493456 CWC25Q9NXE8 425 aaPredicted RBP22.87■■□□□ 1.25
NUP50-218ENST00000493456 PHAXQ9H814 394 aaKnown RBP22.86■■□□□ 1.25
NUP50-218ENST00000493456 PRPF38BQ5VTL8 546 aaKnown RBP22.85■■□□□ 1.25
NUP50-218ENST00000493456 HPS5Q9UPZ3 1129 aa22.85■■□□□ 1.25
NUP50-218ENST00000493456 ZNF853P0CG23 659 aa22.84■■□□□ 1.25
NUP50-218ENST00000493456 CDC5LQ99459 802 aaKnown RBP22.84■■□□□ 1.25
NUP50-218ENST00000493456 MED23Q9ULK4 1368 aa22.84■■□□□ 1.25
NUP50-218ENST00000493456 DDX58O95786 925 aaKnown RBP22.83■■□□□ 1.25
NUP50-218ENST00000493456 NOM1Q5C9Z4 860 aaKnown RBP22.83■■□□□ 1.25
NUP50-218ENST00000493456 CCDC85AQ96PX6 553 aaPredicted RBP22.83■■□□□ 1.25
NUP50-218ENST00000493456 CHMP4AQ9BY43 222 aa22.83■■□□□ 1.25
NUP50-218ENST00000493456 HDAC9Q9UKV0 1011 aa22.83■■□□□ 1.25
NUP50-218ENST00000493456 ADAMTS8Q9UP79 889 aa22.83■■□□□ 1.25
NUP50-218ENST00000493456 MYO3BQ8WXR4 1341 aa22.82■■□□□ 1.24
NUP50-218ENST00000493456 NF2P35240 595 aa22.82■■□□□ 1.24
NUP50-218ENST00000493456 MMP14P50281 582 aa22.82■■□□□ 1.24
NUP50-218ENST00000493456 OGFOD1Q8N543 542 aa22.82■■□□□ 1.24
NUP50-218ENST00000493456 ZNF296Q8WUU4 475 aaPredicted RBP22.82■■□□□ 1.24
NUP50-218ENST00000493456 METTL22Q9BUU2 404 aaPredicted RBP22.82■■□□□ 1.24
NUP50-218ENST00000493456 IFT57Q9NWB7 429 aa22.82■■□□□ 1.24
NUP50-218ENST00000493456 TM4SF4P48230 202 aa22.81■■□□□ 1.24
NUP50-218ENST00000493456 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
NUP50-218ENST00000493456 MOB2Q70IA6 237 aa22.81■■□□□ 1.24
NUP50-218ENST00000493456 UBE2Q2LH0YL09 131 aa22.8■■□□□ 1.24
NUP50-218ENST00000493456 CTSWP56202 376 aa22.8■■□□□ 1.24
NUP50-218ENST00000493456 GNAI1P63096 354 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms