RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 COPRSQ9NQ92 184 aa19.54■□□□□ 0.72
HPS4-216ENST00000493455 BSDC1Q9NW68 430 aaPredicted RBP19.54■□□□□ 0.72
HPS4-216ENST00000493455 LRRC37AA6NMS7 1700 aa19.54■□□□□ 0.72
HPS4-216ENST00000493455 METTL24Q5JXM2 366 aa19.53■□□□□ 0.72
HPS4-216ENST00000493455 TAF5LO75529 589 aa19.52■□□□□ 0.72
HPS4-216ENST00000493455 CHRNDQ07001 517 aa19.52■□□□□ 0.72
HPS4-216ENST00000493455 RWDD1Q9H446 243 aaPredicted RBP19.52■□□□□ 0.72
HPS4-216ENST00000493455 ANKIB1Q9P2G1 1089 aa19.52■□□□□ 0.72
HPS4-216ENST00000493455 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.72
HPS4-216ENST00000493455 GPSM2P81274 684 aa19.51■□□□□ 0.71
HPS4-216ENST00000493455 GPR162Q16538 588 aa19.51■□□□□ 0.71
HPS4-216ENST00000493455 TMC4Q7Z404 712 aa19.51■□□□□ 0.71
HPS4-216ENST00000493455 SP8Q8IXZ3 490 aa19.51■□□□□ 0.71
HPS4-216ENST00000493455 MINPP1Q9UNW1 487 aa19.51■□□□□ 0.71
HPS4-216ENST00000493455 NSFL1CQ9UNZ2 370 aaKnown RBP19.51■□□□□ 0.71
HPS4-216ENST00000493455 IGHDP01880 384 aa19.5■□□□□ 0.71
HPS4-216ENST00000493455 KCNJ4P48050 445 aa19.5■□□□□ 0.71
HPS4-216ENST00000493455 CCDC93Q567U6 631 aa19.5■□□□□ 0.71
HPS4-216ENST00000493455 ATG9AQ7Z3C6 839 aa19.5■□□□□ 0.71
HPS4-216ENST00000493455 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
HPS4-216ENST00000493455 IL15P40933 162 aaPredicted RBP19.49■□□□□ 0.71
HPS4-216ENST00000493455 TFCP2Q12800 502 aa19.49■□□□□ 0.71
HPS4-216ENST00000493455 DPP8Q6V1X1 898 aaPredicted RBP19.49■□□□□ 0.71
HPS4-216ENST00000493455 MPNDQ8N594 471 aa19.49■□□□□ 0.71
HPS4-216ENST00000493455 RIPOR2Q9Y4F9 1068 aa19.49■□□□□ 0.71
HPS4-216ENST00000493455 MROH5Q6ZUA9 1318 aa19.49■□□□□ 0.71
HPS4-216ENST00000493455 C6orf229H3BNL8 230 aa19.48■□□□□ 0.71
HPS4-216ENST00000493455 CIAO1O76071 339 aa19.48■□□□□ 0.71
HPS4-216ENST00000493455 UFL1O94874 794 aa19.48■□□□□ 0.71
HPS4-216ENST00000493455 YBX3P16989 372 aaKnown RBP eCLIP19.48■□□□□ 0.71
HPS4-216ENST00000493455 HDAC1Q13547 482 aaPredicted RBP19.48■□□□□ 0.71
HPS4-216ENST00000493455 B4GALNT3Q6L9W6 998 aa19.48■□□□□ 0.71
HPS4-216ENST00000493455 GPR101Q96P66 508 aaPredicted RBP19.48■□□□□ 0.71
HPS4-216ENST00000493455 ANKRD2Q9GZV1 360 aa19.48■□□□□ 0.71
HPS4-216ENST00000493455 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
HPS4-216ENST00000493455 SNAP23O00161 211 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 HSP90AB4PQ58FF6 505 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 SOGA3Q5TF21 947 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 ARHGAP27Q6ZUM4 889 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 C7orf43Q8WVR3 580 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 IL1RAPL2Q9NP60 686 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 FBXO3Q9UK99 471 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
HPS4-216ENST00000493455 XDHP47989 1333 aa19.47■□□□□ 0.71
HPS4-216ENST00000493455 FER1L6Q2WGJ9 1857 aa19.46■□□□□ 0.71
HPS4-216ENST00000493455 SMARCA5O60264 1052 aaPredicted RBP19.46■□□□□ 0.71
HPS4-216ENST00000493455 SASH1O94885 1247 aa19.46■□□□□ 0.71
HPS4-216ENST00000493455 ERC1Q8IUD2 1116 aa19.46■□□□□ 0.71
HPS4-216ENST00000493455 DCTPP1Q9H773 170 aa19.46■□□□□ 0.71
HPS4-216ENST00000493455 PPP4R2Q9NY27 417 aa19.46■□□□□ 0.71
HPS4-216ENST00000493455 GGA1Q9UJY5 639 aa19.46■□□□□ 0.71
HPS4-216ENST00000493455 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
HPS4-216ENST00000493455 WTIPA6NIX2 430 aaPredicted RBP19.45■□□□□ 0.7
HPS4-216ENST00000493455 RASSF7Q02833 373 aa19.45■□□□□ 0.7
HPS4-216ENST00000493455 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
HPS4-216ENST00000493455 ZBTB47Q9UFB7 747 aaPredicted RBP19.45■□□□□ 0.7
HPS4-216ENST00000493455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.45■□□□□ 0.7
HPS4-216ENST00000493455 LTBP1Q14766 1721 aa19.45■□□□□ 0.7
HPS4-216ENST00000493455 RIMBP2O15034 1052 aa19.44■□□□□ 0.7
HPS4-216ENST00000493455 ERICH6BQ5W0A0 696 aa19.44■□□□□ 0.7
HPS4-216ENST00000493455 RTKN2Q8IZC4 609 aa19.44■□□□□ 0.7
HPS4-216ENST00000493455 RHPN1Q8TCX5 695 aa19.44■□□□□ 0.7
HPS4-216ENST00000493455 NEUROD6Q96NK8 337 aa19.44■□□□□ 0.7
HPS4-216ENST00000493455 GTF3C3Q9Y5Q9 886 aa19.44■□□□□ 0.7
HPS4-216ENST00000493455 DUOX1Q9NRD9 1551 aa19.44■□□□□ 0.7
HPS4-216ENST00000493455 RAB11FIP3O75154 756 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 PDE8BO95263 885 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 ATP2B4P23634 1241 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 ATP2B3Q16720 1220 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 ANKRD45Q5TZF3 282 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 TBC1D16Q8TBP0 767 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 GCC1Q96CN9 775 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 KIF1BPQ96EK5 621 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 LRRCC1Q9C099 1032 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 ZNF804BA4D1E1 1349 aa19.43■□□□□ 0.7
HPS4-216ENST00000493455 PUM3Q15397 648 aaKnown RBP19.42■□□□□ 0.7
HPS4-216ENST00000493455 VGLL2Q8N8G2 317 aa19.42■□□□□ 0.7
HPS4-216ENST00000493455 TAOK3Q9H2K8 898 aa19.42■□□□□ 0.7
HPS4-216ENST00000493455 ZNF277Q9NRM2 450 aaPredicted RBP19.42■□□□□ 0.7
HPS4-216ENST00000493455 DCAF8L1A6NGE4 600 aa19.41■□□□□ 0.7
HPS4-216ENST00000493455 SLC5A1P13866 664 aa19.41■□□□□ 0.7
HPS4-216ENST00000493455 KLRK1P26718 216 aa19.41■□□□□ 0.7
HPS4-216ENST00000493455 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
HPS4-216ENST00000493455 PODXL2Q9NZ53 605 aa19.41■□□□□ 0.7
HPS4-216ENST00000493455 AKAP2Q9Y2D5 859 aa19.41■□□□□ 0.7
HPS4-216ENST00000493455 LEMD3Q9Y2U8 911 aa19.41■□□□□ 0.7
HPS4-216ENST00000493455 ZNF609O15014 1411 aa19.41■□□□□ 0.7
HPS4-216ENST00000493455 ARAP2Q8WZ64 1704 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 A0A1B0GUL7 405 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 NFKBIEO00221 500 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 IFIT1P09914 478 aaKnown RBP19.4■□□□□ 0.7
HPS4-216ENST00000493455 TIMM10P62072 90 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 AACSQ86V21 672 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 SUPT20HQ8NEM7 779 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 EYA3Q99504 573 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 CCDC8Q9H0W5 538 aaPredicted RBP19.4■□□□□ 0.7
HPS4-216ENST00000493455 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
HPS4-216ENST00000493455 SNED1Q8TER0 1413 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms