RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RIPOR2Q9Y4F9 1068 aa17.26■□□□□ 0.35
PDZRN3-210ENST00000492909 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
PDZRN3-210ENST00000492909 TAF1P21675 1872 aa17.26■□□□□ 0.35
PDZRN3-210ENST00000492909 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 POLD1P28340 1107 aa17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
PDZRN3-210ENST00000492909 METTL24Q5JXM2 366 aa17.24■□□□□ 0.35
PDZRN3-210ENST00000492909 AKAP2Q9Y2D5 859 aa17.24■□□□□ 0.35
PDZRN3-210ENST00000492909 ANKRD18AQ8IVF6 992 aa17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 ECHDC1Q9NTX5 307 aa17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 MROH5Q6ZUA9 1318 aa17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 ZNF609O15014 1411 aa17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 ERC2O15083 957 aa17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 TLR7Q9NYK1 1049 aaKnown RBP17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 PPP1R1BQ9UD71 204 aaPredicted RBP17.23■□□□□ 0.35
PDZRN3-210ENST00000492909 AK9Q5TCS8 1911 aa17.22■□□□□ 0.35
PDZRN3-210ENST00000492909 COL4A1P02462 1669 aa17.22■□□□□ 0.35
PDZRN3-210ENST00000492909 DDX46Q7L014 1031 aaKnown RBP17.22■□□□□ 0.35
PDZRN3-210ENST00000492909 PI4K2BQ8TCG2 481 aa17.22■□□□□ 0.35
PDZRN3-210ENST00000492909 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
PDZRN3-210ENST00000492909 ANKRD31Q8N7Z5 1873 aa17.21■□□□□ 0.35
PDZRN3-210ENST00000492909 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
PDZRN3-210ENST00000492909 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
PDZRN3-210ENST00000492909 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 PDE8BO95263 885 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 SDSP20132 328 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 TIMM10P62072 90 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 VGLL2Q8N8G2 317 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 BSDC1Q9NW68 430 aaPredicted RBP17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 ATP2B3Q16720 1220 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 DBNDD2Q9BQY9 259 aa17.2■□□□□ 0.34
PDZRN3-210ENST00000492909 A0A1B0GUL6 1792 aa17.19■□□□□ 0.34
PDZRN3-210ENST00000492909 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
PDZRN3-210ENST00000492909 FHDC1Q9C0D6 1143 aaPredicted RBP17.19■□□□□ 0.34
PDZRN3-210ENST00000492909 KLRG2A4D1S0 409 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-210ENST00000492909 TRIM6-TRIM34B2RNG4 842 aa17.18■□□□□ 0.34
PDZRN3-210ENST00000492909 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
PDZRN3-210ENST00000492909 CDC45O75419 566 aa17.17■□□□□ 0.34
PDZRN3-210ENST00000492909 CHRNDQ07001 517 aa17.17■□□□□ 0.34
PDZRN3-210ENST00000492909 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-210ENST00000492909 HELBQ8NG08 1087 aaPredicted RBP17.17■□□□□ 0.34
PDZRN3-210ENST00000492909 GRAPQ13588 217 aa17.17■□□□□ 0.34
PDZRN3-210ENST00000492909 GRAPLQ8TC17 118 aaPredicted RBP17.17■□□□□ 0.34
PDZRN3-210ENST00000492909 ATP5JP18859 108 aa17.16■□□□□ 0.34
PDZRN3-210ENST00000492909 GORABQ5T7V8 394 aa17.16■□□□□ 0.34
PDZRN3-210ENST00000492909 RILPL2Q969X0 211 aa17.16■□□□□ 0.34
PDZRN3-210ENST00000492909 XAGE2Q96GT9 111 aa17.16■□□□□ 0.34
PDZRN3-210ENST00000492909 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
PDZRN3-210ENST00000492909 TAF5LO75529 589 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 PDE6BP35913 854 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 LPIN2Q92539 896 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 MINPP1Q9UNW1 487 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 FGFR2P21802 821 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
PDZRN3-210ENST00000492909 MAP4K4O95819 1239 aaPredicted RBP17.14■□□□□ 0.33
PDZRN3-210ENST00000492909 SLC5A1P13866 664 aa17.14■□□□□ 0.33
PDZRN3-210ENST00000492909 ADORA1P30542 326 aa17.14■□□□□ 0.33
PDZRN3-210ENST00000492909 DDRGK1Q96HY6 314 aa17.14■□□□□ 0.33
PDZRN3-210ENST00000492909 CRAMP1Q96RY5 1269 aa17.14■□□□□ 0.33
PDZRN3-210ENST00000492909 SYT17Q9BSW7 474 aa17.14■□□□□ 0.33
PDZRN3-210ENST00000492909 C10orf71Q711Q0 1435 aa17.13■□□□□ 0.33
PDZRN3-210ENST00000492909 IFIT1P09914 478 aaKnown RBP17.13■□□□□ 0.33
PDZRN3-210ENST00000492909 ANKRD2Q9GZV1 360 aa17.13■□□□□ 0.33
PDZRN3-210ENST00000492909 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
PDZRN3-210ENST00000492909 SRGNP10124 158 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 NBR1Q14596 966 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 EVI5LQ96CN4 794 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 BBOX1O75936 387 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 SEC24BO95487 1268 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 NPR1P16066 1061 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 TTC39AQ5SRH9 613 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 HAUS7Q99871 368 aa17.12■□□□□ 0.33
PDZRN3-210ENST00000492909 CD2APQ9Y5K6 639 aa17.11■□□□□ 0.33
PDZRN3-210ENST00000492909 A0A0G2JLW4 131 aa17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 SNAP23O00161 211 aa17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 EIF5BO60841 1220 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 CHRNA5P30532 468 aa17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 ALDH1B1P30837 517 aa17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 TMC4Q7Z404 712 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms