RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 HIP1O00291 1037 aa21.52■■□□□ 1.04
EXD3-212ENST00000491734 PCCAP05165 728 aaPredicted RBP21.52■■□□□ 1.04
EXD3-212ENST00000491734 NEUROD6Q96NK8 337 aa21.52■■□□□ 1.04
EXD3-212ENST00000491734 DNAJC2Q99543 621 aaKnown RBP21.52■■□□□ 1.04
EXD3-212ENST00000491734 CCDC171Q6TFL3 1326 aa21.51■■□□□ 1.03
EXD3-212ENST00000491734 CHGBP05060 677 aa21.51■■□□□ 1.03
EXD3-212ENST00000491734 CPA1P15085 419 aa21.51■■□□□ 1.03
EXD3-212ENST00000491734 IL15P40933 162 aaPredicted RBP21.51■■□□□ 1.03
EXD3-212ENST00000491734 PRDM4Q9UKN5 801 aa21.51■■□□□ 1.03
EXD3-212ENST00000491734 ANKRD36CQ5JPF3 1778 aa21.51■■□□□ 1.03
EXD3-212ENST00000491734 LETM1O95202 739 aaPredicted RBP21.51■■□□□ 1.03
EXD3-212ENST00000491734 PTMAP06454 111 aaKnown RBP21.51■■□□□ 1.03
EXD3-212ENST00000491734 ZBTB38Q8NAP3 1195 aaPredicted RBP21.51■■□□□ 1.03
EXD3-212ENST00000491734 PIBF1Q8WXW3 757 aa21.51■■□□□ 1.03
EXD3-212ENST00000491734 RREB1Q92766 1687 aa21.51■■□□□ 1.03
EXD3-212ENST00000491734 THSD7AQ9UPZ6 1657 aa21.5■■□□□ 1.03
EXD3-212ENST00000491734 GTF2F1P35269 517 aaKnown RBP eCLIP21.5■■□□□ 1.03
EXD3-212ENST00000491734 HMGN5P82970 282 aaKnown RBP21.5■■□□□ 1.03
EXD3-212ENST00000491734 ADCK5Q3MIX3 580 aa21.5■■□□□ 1.03
EXD3-212ENST00000491734 FOXD4L5Q5VV16 416 aaPredicted RBP21.5■■□□□ 1.03
EXD3-212ENST00000491734 NLRP10Q86W26 655 aa21.5■■□□□ 1.03
EXD3-212ENST00000491734 FOXD4L4Q8WXT5 416 aaPredicted RBP21.5■■□□□ 1.03
EXD3-212ENST00000491734 TTC14Q96N46 770 aa21.5■■□□□ 1.03
EXD3-212ENST00000491734 HAUS7Q99871 368 aa21.5■■□□□ 1.03
EXD3-212ENST00000491734 TBC1D2BQ9UPU7 963 aa21.5■■□□□ 1.03
EXD3-212ENST00000491734 NECTIN1Q15223 517 aa21.49■■□□□ 1.03
EXD3-212ENST00000491734 ZNF589Q86UQ0 364 aaPredicted RBP21.49■■□□□ 1.03
EXD3-212ENST00000491734 LARP6Q9BRS8 491 aaKnown RBP21.49■■□□□ 1.03
EXD3-212ENST00000491734 SNRKQ9NRH2 765 aa21.49■■□□□ 1.03
EXD3-212ENST00000491734 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
EXD3-212ENST00000491734 RPAP1Q9BWH6 1393 aaPredicted RBP21.49■■□□□ 1.03
EXD3-212ENST00000491734 ZNF831Q5JPB2 1677 aa21.49■■□□□ 1.03
EXD3-212ENST00000491734 CCDC57Q2TAC2 916 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 USP21Q9UK80 565 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 NUP98P52948 1817 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 CIAO1O76071 339 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 IL6STP40189 918 aaPredicted RBP21.48■■□□□ 1.03
EXD3-212ENST00000491734 CCDC183Q5T5S1 534 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 DDX46Q7L014 1031 aaKnown RBP21.48■■□□□ 1.03
EXD3-212ENST00000491734 MAP4K1Q92918 833 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 KCNB2Q92953 911 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 GPR108Q9NPR9 543 aa21.48■■□□□ 1.03
EXD3-212ENST00000491734 CASTP20810 708 aaKnown RBP21.47■■□□□ 1.03
EXD3-212ENST00000491734 MED23Q9ULK4 1368 aa21.47■■□□□ 1.03
EXD3-212ENST00000491734 GADD45BO75293 160 aaPredicted RBP21.47■■□□□ 1.03
EXD3-212ENST00000491734 CSF1RP07333 972 aa21.47■■□□□ 1.03
EXD3-212ENST00000491734 AK2P54819 239 aa21.47■■□□□ 1.03
EXD3-212ENST00000491734 CREB3L3Q68CJ9 461 aa21.47■■□□□ 1.03
EXD3-212ENST00000491734 DZIP3Q86Y13 1208 aaKnown RBP21.47■■□□□ 1.03
EXD3-212ENST00000491734 JAKMIP1Q96N16 626 aaKnown RBP21.47■■□□□ 1.03
EXD3-212ENST00000491734 PLA2G12BQ9BX93 195 aa21.47■■□□□ 1.03
EXD3-212ENST00000491734 KCNJ4P48050 445 aa21.46■■□□□ 1.03
EXD3-212ENST00000491734 CCDC94Q9BW85 323 aaPredicted RBP21.46■■□□□ 1.03
EXD3-212ENST00000491734 SPTLC3Q9NUV7 552 aa21.46■■□□□ 1.03
EXD3-212ENST00000491734 LOC102724428A0A0B4J2F2 783 aa21.46■■□□□ 1.03
EXD3-212ENST00000491734 A0A1B0GUL7 405 aa21.46■■□□□ 1.03
EXD3-212ENST00000491734 SIK1P57059 783 aa21.46■■□□□ 1.03
EXD3-212ENST00000491734 PALLDQ8WX93 1383 aa21.45■■□□□ 1.03
EXD3-212ENST00000491734 ZNF609O15014 1411 aa21.45■■□□□ 1.02
EXD3-212ENST00000491734 COL5A3P25940 1745 aaPredicted RBP21.45■■□□□ 1.02
EXD3-212ENST00000491734 KCNQ2O43526 872 aa21.45■■□□□ 1.02
EXD3-212ENST00000491734 HSP90AB3PQ58FF7 597 aa21.45■■□□□ 1.02
EXD3-212ENST00000491734 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.02
EXD3-212ENST00000491734 RUFY3Q7L099 469 aa21.45■■□□□ 1.02
EXD3-212ENST00000491734 MYH14Q7Z406 1995 aaKnown RBP21.45■■□□□ 1.02
EXD3-212ENST00000491734 SLC27A2O14975 620 aa21.44■■□□□ 1.02
EXD3-212ENST00000491734 ATP6V1AP38606 617 aa21.44■■□□□ 1.02
EXD3-212ENST00000491734 SEC62Q99442 399 aaKnown RBP21.44■■□□□ 1.02
EXD3-212ENST00000491734 CEP126Q9P2H0 1117 aa21.44■■□□□ 1.02
EXD3-212ENST00000491734 COL9A3Q14050 684 aaPredicted RBP21.44■■□□□ 1.02
EXD3-212ENST00000491734 NOLC1Q14978 699 aaKnown RBP eCLIP21.44■■□□□ 1.02
EXD3-212ENST00000491734 CCDC129Q6ZRS4 1044 aa21.44■■□□□ 1.02
EXD3-212ENST00000491734 SMARCC1Q92922 1105 aaPredicted RBP21.44■■□□□ 1.02
EXD3-212ENST00000491734 TAF6LQ9Y6J9 622 aa21.44■■□□□ 1.02
EXD3-212ENST00000491734 CDHR2Q9BYE9 1310 aa21.44■■□□□ 1.02
EXD3-212ENST00000491734 ERVV-1B6SEH8 477 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 GOLIM4O00461 696 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 IFIT5Q13325 482 aaKnown RBP21.43■■□□□ 1.02
EXD3-212ENST00000491734 SLFNL1Q499Z3 407 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 TAF7LQ5H9L4 462 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 TRMT112Q9UI30 125 aaKnown RBP21.43■■□□□ 1.02
EXD3-212ENST00000491734 UBN2Q6ZU65 1347 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 TAF5LO75529 589 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 EIF5P55010 431 aaKnown RBP21.43■■□□□ 1.02
EXD3-212ENST00000491734 ITPK1Q13572 414 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 TTLL11Q8NHH1 800 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 GREM2Q9H772 168 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 ZSWIM6Q9HCJ5 1215 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 CCDC87Q9NVE4 849 aa21.43■■□□□ 1.02
EXD3-212ENST00000491734 IRS4O14654 1257 aaPredicted RBP21.42■■□□□ 1.02
EXD3-212ENST00000491734 ADORA1P30542 326 aa21.42■■□□□ 1.02
EXD3-212ENST00000491734 CRKLP46109 303 aaKnown RBP21.42■■□□□ 1.02
EXD3-212ENST00000491734 UBE2HP62256 183 aa21.42■■□□□ 1.02
EXD3-212ENST00000491734 KBTBD3Q8NAB2 608 aa21.42■■□□□ 1.02
EXD3-212ENST00000491734 PDRG1Q9NUG6 133 aa21.42■■□□□ 1.02
EXD3-212ENST00000491734 ZKSCAN1P17029 563 aaPredicted RBP21.41■■□□□ 1.02
EXD3-212ENST00000491734 TM6SF1Q9BZW5 370 aa21.41■■□□□ 1.02
EXD3-212ENST00000491734 PAG1Q9NWQ8 432 aa21.41■■□□□ 1.02
EXD3-212ENST00000491734 LIMCH1Q9UPQ0 1083 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms