RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 CXCL9Q07325 125 aa23.43■■□□□ 1.34
NDUFB4-204ENST00000491335 EYA3Q99504 573 aa23.43■■□□□ 1.34
NDUFB4-204ENST00000491335 GGA1Q9UJY5 639 aa23.43■■□□□ 1.34
NDUFB4-204ENST00000491335 CHMP3Q9Y3E7 222 aa23.43■■□□□ 1.34
NDUFB4-204ENST00000491335 UTYO14607 1347 aa23.42■■□□□ 1.34
NDUFB4-204ENST00000491335 XDHP47989 1333 aa23.42■■□□□ 1.34
NDUFB4-204ENST00000491335 ANKRD18BA2A2Z9 1011 aa23.42■■□□□ 1.34
NDUFB4-204ENST00000491335 IQCA1LA6NCM1 817 aa23.42■■□□□ 1.34
NDUFB4-204ENST00000491335 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
NDUFB4-204ENST00000491335 ZBED9Q6R2W3 1325 aa23.41■■□□□ 1.34
NDUFB4-204ENST00000491335 YDJCA8MPS7 323 aa23.41■■□□□ 1.34
NDUFB4-204ENST00000491335 FSTL1Q12841 308 aa23.41■■□□□ 1.34
NDUFB4-204ENST00000491335 IFIT5Q13325 482 aaKnown RBP23.41■■□□□ 1.34
NDUFB4-204ENST00000491335 KAZALD1Q96I82 304 aa23.41■■□□□ 1.34
NDUFB4-204ENST00000491335 TAF1DQ9H5J8 278 aaPredicted RBP23.41■■□□□ 1.34
NDUFB4-204ENST00000491335 HACL1Q9UJ83 578 aa23.41■■□□□ 1.34
NDUFB4-204ENST00000491335 WTIPA6NIX2 430 aaPredicted RBP23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 RAD17O75943 681 aa23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 HSPA6P17066 643 aa23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 SMC1BQ8NDV3 1235 aa23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 MPHOSPH8Q99549 860 aa23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 ZC3H12CQ9C0D7 883 aaKnown RBP23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 USP44Q9H0E7 712 aa23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 DBNDD1Q9H9R9 158 aa23.4■■□□□ 1.34
NDUFB4-204ENST00000491335 POTEIP0CG38 1075 aa23.39■■□□□ 1.33
NDUFB4-204ENST00000491335 POTEJP0CG39 1038 aa23.39■■□□□ 1.33
NDUFB4-204ENST00000491335 ATP2B4P23634 1241 aa23.39■■□□□ 1.33
NDUFB4-204ENST00000491335 DOK7Q18PE1 504 aa23.39■■□□□ 1.33
NDUFB4-204ENST00000491335 API5Q9BZZ5 524 aaKnown RBP23.39■■□□□ 1.33
NDUFB4-204ENST00000491335 CIAPIN1Q6FI81 312 aa23.38■■□□□ 1.33
NDUFB4-204ENST00000491335 BCAR3O75815 825 aa23.37■■□□□ 1.33
NDUFB4-204ENST00000491335 EPHX2P34913 555 aa23.37■■□□□ 1.33
NDUFB4-204ENST00000491335 CCT4P50991 539 aaKnown RBP23.37■■□□□ 1.33
NDUFB4-204ENST00000491335 SCNN1DP51172 638 aa23.37■■□□□ 1.33
NDUFB4-204ENST00000491335 TNIP1Q15025 636 aa23.37■■□□□ 1.33
NDUFB4-204ENST00000491335 CCDC57Q2TAC2 916 aa23.37■■□□□ 1.33
NDUFB4-204ENST00000491335 ZNF594Q96JF6 807 aaPredicted RBP23.37■■□□□ 1.33
NDUFB4-204ENST00000491335 KIF16BQ96L93 1317 aa23.36■■□□□ 1.33
NDUFB4-204ENST00000491335 ECE2O60344 883 aa23.36■■□□□ 1.33
NDUFB4-204ENST00000491335 LMOD1P29536 600 aaPredicted RBP23.36■■□□□ 1.33
NDUFB4-204ENST00000491335 EPS15P42566 896 aa23.36■■□□□ 1.33
NDUFB4-204ENST00000491335 ARHGAP45Q92619 1136 aa23.36■■□□□ 1.33
NDUFB4-204ENST00000491335 BICC1Q9H694 974 aaKnown RBP23.36■■□□□ 1.33
NDUFB4-204ENST00000491335 KCNQ5Q9NR82 932 aa23.36■■□□□ 1.33
NDUFB4-204ENST00000491335 G3V3G9 751 aa23.35■■□□□ 1.33
NDUFB4-204ENST00000491335 EAPPQ56P03 285 aaPredicted RBP23.35■■□□□ 1.33
NDUFB4-204ENST00000491335 DCAF8Q5TAQ9 597 aa23.35■■□□□ 1.33
NDUFB4-204ENST00000491335 ANKRD2Q9GZV1 360 aa23.35■■□□□ 1.33
NDUFB4-204ENST00000491335 GMPSP49915 693 aaPredicted RBP23.34■■□□□ 1.33
NDUFB4-204ENST00000491335 CHRNDQ07001 517 aa23.34■■□□□ 1.33
NDUFB4-204ENST00000491335 TAF7LQ5H9L4 462 aa23.34■■□□□ 1.33
NDUFB4-204ENST00000491335 ANKRD44Q8N8A2 993 aa23.34■■□□□ 1.33
NDUFB4-204ENST00000491335 LEMD3Q9Y2U8 911 aa23.34■■□□□ 1.33
NDUFB4-204ENST00000491335 IPO8O15397 1037 aaKnown RBP23.33■■□□□ 1.33
NDUFB4-204ENST00000491335 RABL6Q3YEC7 729 aaPredicted RBP23.33■■□□□ 1.33
NDUFB4-204ENST00000491335 CHADLQ6NUI6 762 aa23.33■■□□□ 1.33
NDUFB4-204ENST00000491335 LDHAL6AQ6ZMR3 332 aa23.33■■□□□ 1.33
NDUFB4-204ENST00000491335 PNMA8AQ86V59 439 aaPredicted RBP23.33■■□□□ 1.33
NDUFB4-204ENST00000491335 LDHDQ86WU2 507 aa23.33■■□□□ 1.33
NDUFB4-204ENST00000491335 GPRC5DQ9NZD1 345 aa23.33■■□□□ 1.33
NDUFB4-204ENST00000491335 SCN9AQ15858 1988 aa23.32■■□□□ 1.32
NDUFB4-204ENST00000491335 PSMD14O00487 310 aa23.32■■□□□ 1.32
NDUFB4-204ENST00000491335 HELBQ8NG08 1087 aaPredicted RBP23.32■■□□□ 1.32
NDUFB4-204ENST00000491335 FRAT1Q92837 279 aaPredicted RBP23.32■■□□□ 1.32
NDUFB4-204ENST00000491335 CLEC11AQ9Y240 323 aa23.32■■□□□ 1.32
NDUFB4-204ENST00000491335 CNNM1Q9NRU3 951 aa23.31■■□□□ 1.32
NDUFB4-204ENST00000491335 TNNQ9UQP3 1299 aa23.31■■□□□ 1.32
NDUFB4-204ENST00000491335 ZNF804BA4D1E1 1349 aa23.31■■□□□ 1.32
NDUFB4-204ENST00000491335 MED23Q9ULK4 1368 aa23.3■■□□□ 1.32
NDUFB4-204ENST00000491335 SNAP23O00161 211 aa23.3■■□□□ 1.32
NDUFB4-204ENST00000491335 TAF5LO75529 589 aa23.3■■□□□ 1.32
NDUFB4-204ENST00000491335 TXNRD3Q86VQ6 643 aa23.3■■□□□ 1.32
NDUFB4-204ENST00000491335 ZBTB12Q9Y330 459 aaPredicted RBP23.3■■□□□ 1.32
NDUFB4-204ENST00000491335 TRIM27P14373 513 aa23.29■■□□□ 1.32
NDUFB4-204ENST00000491335 APLP1P51693 650 aa23.29■■□□□ 1.32
NDUFB4-204ENST00000491335 INTS3Q68E01 1043 aaKnown RBP23.29■■□□□ 1.32
NDUFB4-204ENST00000491335 ATF7IPQ6VMQ6 1270 aa23.29■■□□□ 1.32
NDUFB4-204ENST00000491335 PUS3Q9BZE2 481 aaKnown RBP23.29■■□□□ 1.32
NDUFB4-204ENST00000491335 PLIN1O60240 522 aa23.28■■□□□ 1.32
NDUFB4-204ENST00000491335 UBTFL1P0CB47 393 aaPredicted RBP23.28■■□□□ 1.32
NDUFB4-204ENST00000491335 KLRK1P26718 216 aa23.28■■□□□ 1.32
NDUFB4-204ENST00000491335 KCNJ4P48050 445 aa23.28■■□□□ 1.32
NDUFB4-204ENST00000491335 ADARB2Q9NS39 739 aaKnown RBP23.28■■□□□ 1.32
NDUFB4-204ENST00000491335 CNOT7Q9UIV1 285 aaKnown RBP23.28■■□□□ 1.32
NDUFB4-204ENST00000491335 A0A1B0GUL6 1792 aa23.27■■□□□ 1.32
NDUFB4-204ENST00000491335 ADAMTSL1Q8N6G6 1762 aa23.27■■□□□ 1.32
NDUFB4-204ENST00000491335 SHTN1A0MZ66 631 aa23.27■■□□□ 1.32
NDUFB4-204ENST00000491335 VIL1P09327 827 aaKnown RBP23.27■■□□□ 1.32
NDUFB4-204ENST00000491335 USP50Q70EL3 339 aaPredicted RBP23.27■■□□□ 1.32
NDUFB4-204ENST00000491335 PODNQ7Z5L7 613 aa23.27■■□□□ 1.32
NDUFB4-204ENST00000491335 CLUAP1Q96AJ1 413 aa23.27■■□□□ 1.32
NDUFB4-204ENST00000491335 ZKSCAN2Q63HK3 967 aa23.26■■□□□ 1.31
NDUFB4-204ENST00000491335 DPF2Q92785 391 aa23.26■■□□□ 1.31
NDUFB4-204ENST00000491335 MEIS3Q99687 375 aa23.26■■□□□ 1.31
NDUFB4-204ENST00000491335 RIPOR2Q9Y4F9 1068 aa23.26■■□□□ 1.31
NDUFB4-204ENST00000491335 H7C1D1 291 aa23.25■■□□□ 1.31
NDUFB4-204ENST00000491335 HTRA3P83110 453 aa23.25■■□□□ 1.31
NDUFB4-204ENST00000491335 MAP1SQ66K74 1059 aaPredicted RBP23.25■■□□□ 1.31
NDUFB4-204ENST00000491335 MICALL2Q8IY33 904 aa23.25■■□□□ 1.31
NDUFB4-204ENST00000491335 KLHDC4Q8TBB5 520 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms