RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 USP16Q9Y5T5 823 aa22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
SNAPC3-206ENST00000490969 RPS6KB1P23443 525 aa22.7■■□□□ 1.22
SNAPC3-206ENST00000490969 TOB2Q14106 344 aaPredicted RBP22.7■■□□□ 1.22
SNAPC3-206ENST00000490969 STK3Q13188 491 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 NMIQ13287 307 aaPredicted RBP22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 BEND3Q5T5X7 828 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 FILIP1Q7Z7B0 1213 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 TIGD1Q96MW7 591 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 ALDH8A1Q9H2A2 487 aaPredicted RBP22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 IFIT2P09913 472 aaKnown RBP22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 FAM193AP78312 1265 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 RESTQ13127 1097 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 STX1AQ16623 288 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 BABAM1Q9NWV8 329 aa22.69■■□□□ 1.22
SNAPC3-206ENST00000490969 IRX5P78411 483 aaPredicted RBP22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 ST7Q9NRC1 585 aa22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 KCND1Q9NSA2 647 aa22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 ZNF446Q9NWS9 450 aa22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 ROBO1Q9Y6N7 1651 aa22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 ADCY9O60503 1353 aa22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 EIF4A1P60842 406 aaKnown RBP22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 TEFQ10587 303 aa22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 RNF20Q5VTR2 975 aa22.68■■□□□ 1.22
SNAPC3-206ENST00000490969 ERICH4A6NGS2 130 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 BTBD11A6QL63 1104 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 CYP27B1O15528 508 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 DNAAF4Q8WXU2 420 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 STRN4Q9NRL3 753 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 PRAMEF22A3QJZ6 481 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 BECN2A8MW95 431 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 KIF2AO00139 706 aaPredicted RBP22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 HIP1O00291 1037 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 TAF6LQ9Y6J9 622 aa22.67■■□□□ 1.22
SNAPC3-206ENST00000490969 TATP17735 454 aaPredicted RBP22.66■■□□□ 1.22
SNAPC3-206ENST00000490969 CREBRFQ8IUR6 639 aa22.66■■□□□ 1.22
SNAPC3-206ENST00000490969 SNRKQ9NRH2 765 aa22.66■■□□□ 1.22
SNAPC3-206ENST00000490969 CTAGE5O15320 804 aa22.66■■□□□ 1.22
SNAPC3-206ENST00000490969 KDM6AO15550 1401 aaPredicted RBP22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 PI4KAP2A4QPH2 592 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 JAK2O60674 1132 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 MTX1Q13505 466 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 PI4KAP1Q8N8J0 262 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 BRF1Q92994 677 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 CALCOCO1Q9P1Z2 691 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 CFAP45Q9UL16 551 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 COL5A2P05997 1499 aaPredicted RBP22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 PHKG2P15735 406 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 EIF2S2P20042 333 aaKnown RBP22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 TOM1L2Q6ZVM7 507 aa22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 DHX40Q8IX18 779 aaKnown RBP22.65■■□□□ 1.22
SNAPC3-206ENST00000490969 KDM3BQ7LBC6 1761 aa22.64■■□□□ 1.22
SNAPC3-206ENST00000490969 NPHP1O15259 732 aa22.64■■□□□ 1.22
SNAPC3-206ENST00000490969 CDK11BP21127 795 aaKnown RBP22.64■■□□□ 1.22
SNAPC3-206ENST00000490969 AACSQ86V21 672 aa22.64■■□□□ 1.22
SNAPC3-206ENST00000490969 WDR17Q8IZU2 1322 aa22.64■■□□□ 1.21
SNAPC3-206ENST00000490969 A0A0D9SFI3 127 aa22.64■■□□□ 1.21
SNAPC3-206ENST00000490969 H2AFXP16104 143 aaPredicted RBP22.64■■□□□ 1.21
SNAPC3-206ENST00000490969 BMS1Q14692 1282 aaKnown RBP22.64■■□□□ 1.21
SNAPC3-206ENST00000490969 DDX11Q96FC9 970 aa22.64■■□□□ 1.21
SNAPC3-206ENST00000490969 ANXA1P04083 346 aa22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 ERC1Q8IUD2 1116 aa22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 ZSCAN16Q9H4T2 348 aaPredicted RBP22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 GTF3C6Q969F1 213 aa22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 NOL10Q9BSC4 688 aaKnown RBP22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 L2HGDHQ9H9P8 463 aa22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 PA2G4Q9UQ80 394 aaKnown RBP22.63■■□□□ 1.21
SNAPC3-206ENST00000490969 H3BQV1 296 aa22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 GSDMDP57764 484 aa22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 IFFO2Q5TF58 517 aa22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 CEBPZQ03701 1054 aaKnown RBP22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 SNW1Q13573 536 aaKnown RBP22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 ERCC6LQ2NKX8 1250 aa22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 CCAR1Q8IX12 1150 aaKnown RBP22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 CHPF2Q9P2E5 772 aa22.62■■□□□ 1.21
SNAPC3-206ENST00000490969 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.61■■□□□ 1.21
SNAPC3-206ENST00000490969 NFATC2IPQ8NCF5 419 aa22.61■■□□□ 1.21
SNAPC3-206ENST00000490969 ANO10Q9NW15 660 aa22.61■■□□□ 1.21
SNAPC3-206ENST00000490969 HMG20BQ9P0W2 317 aa22.61■■□□□ 1.21
SNAPC3-206ENST00000490969 ABCC6O95255 1503 aa22.61■■□□□ 1.21
SNAPC3-206ENST00000490969 GOLPH3LQ9H4A5 285 aa22.61■■□□□ 1.21
SNAPC3-206ENST00000490969 MED23Q9ULK4 1368 aa22.61■■□□□ 1.21
SNAPC3-206ENST00000490969 A0A087WWV3 80 aa22.6■■□□□ 1.21
SNAPC3-206ENST00000490969 TSGA10IPQ3SY00 556 aa22.6■■□□□ 1.21
SNAPC3-206ENST00000490969 SIPA1L3O60292 1781 aaPredicted RBP22.6■■□□□ 1.21
SNAPC3-206ENST00000490969 CYP2C19P33261 490 aa22.6■■□□□ 1.21
SNAPC3-206ENST00000490969 OSBPL5Q9H0X9 879 aaPredicted RBP22.6■■□□□ 1.21
SNAPC3-206ENST00000490969 FHOD1Q9Y613 1164 aa22.6■■□□□ 1.21
SNAPC3-206ENST00000490969 E4F1Q66K89 784 aaPredicted RBP22.59■■□□□ 1.21
SNAPC3-206ENST00000490969 CEP57L1Q8IYX8 460 aa22.59■■□□□ 1.21
SNAPC3-206ENST00000490969 FSD1Q9BTV5 496 aa22.59■■□□□ 1.21
SNAPC3-206ENST00000490969 ADAMTS7Q9UKP4 1686 aa22.59■■□□□ 1.21
SNAPC3-206ENST00000490969 ADD1P35611 737 aaKnown RBP22.59■■□□□ 1.21
SNAPC3-206ENST00000490969 CCDC73Q6ZRK6 1079 aa22.59■■□□□ 1.21
SNAPC3-206ENST00000490969 AOPEPQ8N6M6 819 aa22.59■■□□□ 1.21
SNAPC3-206ENST00000490969 NBPF11Q86T75 865 aa22.58■■□□□ 1.21
SNAPC3-206ENST00000490969 RCOR1Q9UKL0 485 aa22.58■■□□□ 1.21
SNAPC3-206ENST00000490969 KINO60870 393 aaKnown RBP22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms