RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TNIP1Q15025 636 aa25.08■■□□□ 1.61
SMC4-222ENST00000490207 FAM161AQ3B820 660 aa25.08■■□□□ 1.61
SMC4-222ENST00000490207 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
SMC4-222ENST00000490207 MRPL50Q8N5N7 158 aaKnown RBP25.08■■□□□ 1.61
SMC4-222ENST00000490207 SLC4A10Q6U841 1118 aa25.07■■□□□ 1.6
SMC4-222ENST00000490207 PSME4Q14997 1843 aa25.07■■□□□ 1.6
SMC4-222ENST00000490207 A0A1B0GUL6 1792 aa25.06■■□□□ 1.6
SMC4-222ENST00000490207 SCN9AQ15858 1988 aa25.06■■□□□ 1.6
SMC4-222ENST00000490207 ECE2O60344 883 aa25.06■■□□□ 1.6
SMC4-222ENST00000490207 ITGA6P23229 1130 aa25.06■■□□□ 1.6
SMC4-222ENST00000490207 GMPSP49915 693 aaPredicted RBP25.06■■□□□ 1.6
SMC4-222ENST00000490207 DNAJC5GQ8N7S2 189 aa25.06■■□□□ 1.6
SMC4-222ENST00000490207 BSDC1Q9NW68 430 aaPredicted RBP25.06■■□□□ 1.6
SMC4-222ENST00000490207 GPRC5DQ9NZD1 345 aa25.06■■□□□ 1.6
SMC4-222ENST00000490207 CSF1RP07333 972 aa25.05■■□□□ 1.6
SMC4-222ENST00000490207 IGHMBP2P38935 993 aaKnown RBP25.05■■□□□ 1.6
SMC4-222ENST00000490207 BCL2L13Q9BXK5 485 aa25.05■■□□□ 1.6
SMC4-222ENST00000490207 ZC3H12CQ9C0D7 883 aaKnown RBP25.05■■□□□ 1.6
SMC4-222ENST00000490207 SRCIN1Q9C0H9 1055 aa25.05■■□□□ 1.6
SMC4-222ENST00000490207 GRM8O00222 908 aa25.04■■□□□ 1.6
SMC4-222ENST00000490207 ALDH1L1O75891 902 aa25.04■■□□□ 1.6
SMC4-222ENST00000490207 DOK7Q18PE1 504 aa25.04■■□□□ 1.6
SMC4-222ENST00000490207 TRMT2AQ8IZ69 625 aaKnown RBP25.04■■□□□ 1.6
SMC4-222ENST00000490207 SSH1Q8WYL5 1049 aa25.04■■□□□ 1.6
SMC4-222ENST00000490207 PTPRCP08575 1304 aa25.04■■□□□ 1.6
SMC4-222ENST00000490207 PASKQ96RG2 1323 aa25.04■■□□□ 1.6
SMC4-222ENST00000490207 ATP2B4P23634 1241 aa25.03■■□□□ 1.6
SMC4-222ENST00000490207 USP50Q70EL3 339 aaPredicted RBP25.03■■□□□ 1.6
SMC4-222ENST00000490207 KLRG1Q96E93 195 aa25.03■■□□□ 1.6
SMC4-222ENST00000490207 ADARB2Q9NS39 739 aaKnown RBP25.03■■□□□ 1.6
SMC4-222ENST00000490207 C9orf78Q9NZ63 289 aaPredicted RBP25.03■■□□□ 1.6
SMC4-222ENST00000490207 MINPP1Q9UNW1 487 aa25.03■■□□□ 1.6
SMC4-222ENST00000490207 PSMD14O00487 310 aa25.02■■□□□ 1.6
SMC4-222ENST00000490207 ALDH1L2Q3SY69 923 aa25.02■■□□□ 1.6
SMC4-222ENST00000490207 MIER1Q8N108 512 aa25.02■■□□□ 1.6
SMC4-222ENST00000490207 ANKRD18BA2A2Z9 1011 aa25.01■■□□□ 1.59
SMC4-222ENST00000490207 G3V3G9 751 aa25.01■■□□□ 1.59
SMC4-222ENST00000490207 FOXO4P98177 505 aa25.01■■□□□ 1.59
SMC4-222ENST00000490207 DCAF8Q5TAQ9 597 aa25.01■■□□□ 1.59
SMC4-222ENST00000490207 MAP1SQ66K74 1059 aaPredicted RBP25.01■■□□□ 1.59
SMC4-222ENST00000490207 CHMP3Q9Y3E7 222 aa25.01■■□□□ 1.59
SMC4-222ENST00000490207 ITGBL1O95965 494 aaPredicted RBP25■■□□□ 1.59
SMC4-222ENST00000490207 MPHOSPH8Q99549 860 aa25■■□□□ 1.59
SMC4-222ENST00000490207 SMC4Q9NTJ3 1288 aa25■■□□□ 1.59
SMC4-222ENST00000490207 MED23Q9ULK4 1368 aa25■■□□□ 1.59
SMC4-222ENST00000490207 CT47B1P0C2W7 299 aaPredicted RBP24.99■■□□□ 1.59
SMC4-222ENST00000490207 CNTROBQ8N137 903 aa24.99■■□□□ 1.59
SMC4-222ENST00000490207 CREBZFQ9NS37 354 aa24.99■■□□□ 1.59
SMC4-222ENST00000490207 CCT4P50991 539 aaKnown RBP24.98■■□□□ 1.59
SMC4-222ENST00000490207 EPHA10Q5JZY3 1008 aa24.98■■□□□ 1.59
SMC4-222ENST00000490207 KCNQ5Q9NR82 932 aa24.98■■□□□ 1.59
SMC4-222ENST00000490207 ZBTB12Q9Y330 459 aaPredicted RBP24.98■■□□□ 1.59
SMC4-222ENST00000490207 IFIT5Q13325 482 aaKnown RBP24.97■■□□□ 1.59
SMC4-222ENST00000490207 LMBR1LQ6UX01 489 aa24.97■■□□□ 1.59
SMC4-222ENST00000490207 CNOT7Q9UIV1 285 aaKnown RBP24.97■■□□□ 1.59
SMC4-222ENST00000490207 TRPM7Q96QT4 1865 aa24.97■■□□□ 1.59
SMC4-222ENST00000490207 ZNF646O15015 1829 aaPredicted RBP24.97■■□□□ 1.59
SMC4-222ENST00000490207 SHTN1A0MZ66 631 aa24.96■■□□□ 1.59
SMC4-222ENST00000490207 RPS12P25398 132 aaKnown RBP24.96■■□□□ 1.59
SMC4-222ENST00000490207 MICALL2Q8IY33 904 aa24.96■■□□□ 1.59
SMC4-222ENST00000490207 DPF2Q92785 391 aa24.96■■□□□ 1.59
SMC4-222ENST00000490207 ANKRD2Q9GZV1 360 aa24.96■■□□□ 1.59
SMC4-222ENST00000490207 WTIPA6NIX2 430 aaPredicted RBP24.95■■□□□ 1.58
SMC4-222ENST00000490207 H7C1D1 291 aa24.95■■□□□ 1.58
SMC4-222ENST00000490207 TRPM4Q8TD43 1214 aa24.95■■□□□ 1.58
SMC4-222ENST00000490207 SUCLG2Q96I99 432 aa24.95■■□□□ 1.58
SMC4-222ENST00000490207 LEMD3Q9Y2U8 911 aa24.95■■□□□ 1.58
SMC4-222ENST00000490207 ZNF609O15014 1411 aa24.95■■□□□ 1.58
SMC4-222ENST00000490207 UTYO14607 1347 aa24.94■■□□□ 1.58
SMC4-222ENST00000490207 CHRNDQ07001 517 aa24.94■■□□□ 1.58
SMC4-222ENST00000490207 ZNF804BA4D1E1 1349 aa24.93■■□□□ 1.58
SMC4-222ENST00000490207 TMEM88BA6NKF7 163 aa24.93■■□□□ 1.58
SMC4-222ENST00000490207 NBPF7P0C2Y1 421 aaPredicted RBP24.93■■□□□ 1.58
SMC4-222ENST00000490207 CCDC57Q2TAC2 916 aa24.93■■□□□ 1.58
SMC4-222ENST00000490207 TAF7LQ5H9L4 462 aa24.93■■□□□ 1.58
SMC4-222ENST00000490207 VIL1P09327 827 aaKnown RBP24.92■■□□□ 1.58
SMC4-222ENST00000490207 KCNJ4P48050 445 aa24.92■■□□□ 1.58
SMC4-222ENST00000490207 PODNQ7Z5L7 613 aa24.92■■□□□ 1.58
SMC4-222ENST00000490207 JMYQ8N9B5 988 aa24.92■■□□□ 1.58
SMC4-222ENST00000490207 HIRAP54198 1017 aaPredicted RBP24.9■■□□□ 1.58
SMC4-222ENST00000490207 RSBN1LQ6PCB5 846 aaPredicted RBP24.9■■□□□ 1.58
SMC4-222ENST00000490207 KAZALD1Q96I82 304 aa24.9■■□□□ 1.58
SMC4-222ENST00000490207 ZNF594Q96JF6 807 aaPredicted RBP24.9■■□□□ 1.58
SMC4-222ENST00000490207 MKRN1Q9UHC7 482 aaKnown RBP24.9■■□□□ 1.58
SMC4-222ENST00000490207 SAMD7Q7Z3H4 446 aa24.89■■□□□ 1.58
SMC4-222ENST00000490207 ZC3H15Q8WU90 426 aaKnown RBP24.89■■□□□ 1.58
SMC4-222ENST00000490207 CNTNAP1P78357 1384 aa24.89■■□□□ 1.57
SMC4-222ENST00000490207 USP17L3A6NCW0 530 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 USP17L4A6NCW7 530 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 KLRK1P26718 216 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 BRPF1P55201 1214 aaPredicted RBP24.88■■□□□ 1.57
SMC4-222ENST00000490207 HNRNPUQ00839 825 aaKnown RBP eCLIP24.88■■□□□ 1.57
SMC4-222ENST00000490207 TBC1D10BQ4KMP7 808 aaPredicted RBP24.88■■□□□ 1.57
SMC4-222ENST00000490207 USP17L1Q7RTZ2 530 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 TXNRD3Q86VQ6 643 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 AGBL3Q8NEM8 1001 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 COA1Q9GZY4 146 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 BICC1Q9H694 974 aaKnown RBP24.88■■□□□ 1.57
SMC4-222ENST00000490207 CNNM1Q9NRU3 951 aa24.88■■□□□ 1.57
SMC4-222ENST00000490207 PGAP2Q9UHJ9 254 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms