RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 WASHC4Q2M389 1173 aa18.62■□□□□ 0.57
BRD9-208ENST00000489816 KBTBD3Q8NAB2 608 aa18.62■□□□□ 0.57
BRD9-208ENST00000489816 FAM184AQ8NB25 1140 aa18.62■□□□□ 0.57
BRD9-208ENST00000489816 BICD2Q8TD16 824 aa18.62■□□□□ 0.57
BRD9-208ENST00000489816 FAM177BA6PVY3 158 aa18.61■□□□□ 0.57
BRD9-208ENST00000489816 H7C1W4 665 aa18.61■□□□□ 0.57
BRD9-208ENST00000489816 SCRN1Q12765 414 aa18.61■□□□□ 0.57
BRD9-208ENST00000489816 LUZP1Q86V48 1076 aa18.61■□□□□ 0.57
BRD9-208ENST00000489816 OVOS2A0A0G2JMS6 1433 aa18.61■□□□□ 0.57
BRD9-208ENST00000489816 ANKRD1Q15327 319 aa18.61■□□□□ 0.57
BRD9-208ENST00000489816 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
BRD9-208ENST00000489816 ERCC4Q92889 916 aaPredicted RBP18.6■□□□□ 0.57
BRD9-208ENST00000489816 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
BRD9-208ENST00000489816 TRPM3Q9HCF6 1732 aaPredicted RBP18.6■□□□□ 0.57
BRD9-208ENST00000489816 SCARF1Q14162 830 aa18.59■□□□□ 0.57
BRD9-208ENST00000489816 HSP90AA2PQ14568 343 aaPredicted RBP18.59■□□□□ 0.57
BRD9-208ENST00000489816 OTUD7BQ6GQQ9 843 aa18.59■□□□□ 0.57
BRD9-208ENST00000489816 FAM13BQ9NYF5 915 aa18.59■□□□□ 0.57
BRD9-208ENST00000489816 NR1I2O75469 434 aa18.59■□□□□ 0.57
BRD9-208ENST00000489816 TSC1Q92574 1164 aa18.59■□□□□ 0.57
BRD9-208ENST00000489816 GTF3C6Q969F1 213 aa18.59■□□□□ 0.57
BRD9-208ENST00000489816 PDCP20941 246 aa18.58■□□□□ 0.57
BRD9-208ENST00000489816 CCDC57Q2TAC2 916 aa18.58■□□□□ 0.57
BRD9-208ENST00000489816 LEO1Q8WVC0 666 aaPredicted RBP18.58■□□□□ 0.57
BRD9-208ENST00000489816 NUP62CLQ9H1M0 184 aa18.58■□□□□ 0.57
BRD9-208ENST00000489816 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.57
BRD9-208ENST00000489816 U3KPZ7 1027 aaPredicted RBP18.58■□□□□ 0.57
BRD9-208ENST00000489816 EYA2O00167 538 aa18.58■□□□□ 0.57
BRD9-208ENST00000489816 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.58■□□□□ 0.57
BRD9-208ENST00000489816 GJB4Q9NTQ9 266 aa18.58■□□□□ 0.57
BRD9-208ENST00000489816 CEP126Q9P2H0 1117 aa18.58■□□□□ 0.57
BRD9-208ENST00000489816 TNMDQ9H2S6 317 aa18.58■□□□□ 0.56
BRD9-208ENST00000489816 M0R2C6 588 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 HSPD1P10809 573 aaKnown RBP18.57■□□□□ 0.56
BRD9-208ENST00000489816 IL2RBP14784 551 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 OSBP2Q969R2 916 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 PGBD1Q96JS3 809 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 HS1BP3Q53T59 392 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
BRD9-208ENST00000489816 WDR17Q8IZU2 1322 aa18.56■□□□□ 0.56
BRD9-208ENST00000489816 PHRF1Q9P1Y6 1649 aaKnown RBP18.56■□□□□ 0.56
BRD9-208ENST00000489816 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
BRD9-208ENST00000489816 MAST3O60307 1309 aa18.56■□□□□ 0.56
BRD9-208ENST00000489816 PCDH11XQ9BZA7 1347 aa18.56■□□□□ 0.56
BRD9-208ENST00000489816 PCDH11YQ9BZA8 1340 aa18.56■□□□□ 0.56
BRD9-208ENST00000489816 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
BRD9-208ENST00000489816 SNAP23O00161 211 aa18.56■□□□□ 0.56
BRD9-208ENST00000489816 ZNF500O60304 480 aaPredicted RBP18.56■□□□□ 0.56
BRD9-208ENST00000489816 IL15P40933 162 aaPredicted RBP18.56■□□□□ 0.56
BRD9-208ENST00000489816 KRT32Q14532 448 aa18.56■□□□□ 0.56
BRD9-208ENST00000489816 TMOD3Q9NYL9 352 aa18.56■□□□□ 0.56
BRD9-208ENST00000489816 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 HELBQ8NG08 1087 aaPredicted RBP18.55■□□□□ 0.56
BRD9-208ENST00000489816 FUCA2Q9BTY2 467 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 UQCRHLA0A096LP55 91 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 E7EWF7 191 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 UQCRHP07919 91 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 CCDC192P0DO97 292 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 HLFQ16534 295 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 ANO6Q4KMQ2 910 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 TTC39AQ5SRH9 613 aa18.55■□□□□ 0.56
BRD9-208ENST00000489816 XAGE2Q96GT9 111 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 PTPDC1A2A3K4 754 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 ZAP70P43403 619 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 TYRO3Q06418 890 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 DHX32Q7L7V1 743 aaKnown RBP18.54■□□□□ 0.56
BRD9-208ENST00000489816 STK11IPQ8N1F8 1099 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 CTDNEP1O95476 244 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
BRD9-208ENST00000489816 ZNF142P52746 1687 aaPredicted RBP18.53■□□□□ 0.56
BRD9-208ENST00000489816 LETM1O95202 739 aaPredicted RBP18.53■□□□□ 0.56
BRD9-208ENST00000489816 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
BRD9-208ENST00000489816 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
BRD9-208ENST00000489816 TBC1D2BQ9UPU7 963 aa18.53■□□□□ 0.56
BRD9-208ENST00000489816 ADAMTSL3P82987 1691 aa18.53■□□□□ 0.56
BRD9-208ENST00000489816 DNAJC25Q9H1X3 360 aa18.53■□□□□ 0.56
BRD9-208ENST00000489816 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
BRD9-208ENST00000489816 AFDNP55196 1824 aaKnown RBP18.52■□□□□ 0.56
BRD9-208ENST00000489816 RXRAP19793 462 aa18.52■□□□□ 0.56
BRD9-208ENST00000489816 DRC7Q8IY82 874 aa18.52■□□□□ 0.56
BRD9-208ENST00000489816 PIGBQ92521 554 aa18.52■□□□□ 0.56
BRD9-208ENST00000489816 SCAND2PQ9GZW5 306 aaPredicted RBP18.52■□□□□ 0.56
BRD9-208ENST00000489816 RNF113AO15541 343 aaKnown RBP18.52■□□□□ 0.56
BRD9-208ENST00000489816 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
BRD9-208ENST00000489816 TSGA10IPQ3SY00 556 aa18.52■□□□□ 0.56
BRD9-208ENST00000489816 PUS7LQ9H0K6 701 aaKnown RBP18.52■□□□□ 0.56
BRD9-208ENST00000489816 MRVI1Q9Y6F6 885 aa18.52■□□□□ 0.56
BRD9-208ENST00000489816 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.55
BRD9-208ENST00000489816 ZMYM1Q5SVZ6 1142 aa18.52■□□□□ 0.55
BRD9-208ENST00000489816 NSUN7Q8NE18 718 aaKnown RBP18.52■□□□□ 0.55
BRD9-208ENST00000489816 CCDC158Q5M9N0 1113 aa18.51■□□□□ 0.55
BRD9-208ENST00000489816 APPP05067 770 aa18.51■□□□□ 0.55
BRD9-208ENST00000489816 RESTQ13127 1097 aa18.51■□□□□ 0.55
BRD9-208ENST00000489816 LDHAL6AQ6ZMR3 332 aa18.51■□□□□ 0.55
BRD9-208ENST00000489816 ALS2Q96Q42 1657 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms