RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TAF1P21675 1872 aa13.36□□□□□ -0.27
SCAMP4-208ENST00000489554 CEP350Q5VT06 3117 aa13.35□□□□□ -0.27
SCAMP4-208ENST00000489554 COL4A1P02462 1669 aa13.35□□□□□ -0.27
SCAMP4-208ENST00000489554 TBC1D16Q8TBP0 767 aa13.35□□□□□ -0.27
SCAMP4-208ENST00000489554 ANKIB1Q9P2G1 1089 aa13.35□□□□□ -0.27
SCAMP4-208ENST00000489554 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
SCAMP4-208ENST00000489554 F6X3S4 739 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 CASP7P55210 303 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 HTRA3P83110 453 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 BEND3Q5T5X7 828 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 USP50Q70EL3 339 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 KLRG1Q96E93 195 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 ZC3H12CQ9C0D7 883 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 GREM2Q9H772 168 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 GPRC5DQ9NZD1 345 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 GGA1Q9UJY5 639 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 NOB1Q9ULX3 412 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 XDHP47989 1333 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
SCAMP4-208ENST00000489554 YDJCA8MPS7 323 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 RIMBP2O15034 1052 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 RAD17O75943 681 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 UFL1O94874 794 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 TRIM27P14373 513 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 EPS15P42566 896 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 ADARB2Q9NS39 739 aaKnown RBP13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 LTBP1Q14766 1721 aa13.33□□□□□ -0.28
SCAMP4-208ENST00000489554 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 ECE2O60344 883 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 ALDH1L1O75891 902 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 CSF1RP07333 972 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 RLBP1P12271 317 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 IGHMBP2P38935 993 aaKnown RBP13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 ARHGAP45Q92619 1136 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
SCAMP4-208ENST00000489554 G3V3G9 751 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 NEFLP07196 543 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 ITGA6P23229 1130 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 CNTROBQ8N137 903 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 FRAT1Q92837 279 aaPredicted RBP13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 SRCIN1Q9C0H9 1055 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 PTPRCP08575 1304 aa13.31□□□□□ -0.28
SCAMP4-208ENST00000489554 GRM8O00222 908 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 RPS12P25398 132 aaKnown RBP13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 MAP1SQ66K74 1059 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 SLC4A10Q6U841 1118 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 DPF2Q92785 391 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 MPHOSPH8Q99549 860 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 C9orf78Q9NZ63 289 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 MYH3P11055 1940 aa13.3□□□□□ -0.28
SCAMP4-208ENST00000489554 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
SCAMP4-208ENST00000489554 H7C1D1 291 aa13.29□□□□□ -0.28
SCAMP4-208ENST00000489554 PSMD14O00487 310 aa13.29□□□□□ -0.28
SCAMP4-208ENST00000489554 ANKRD2Q9GZV1 360 aa13.29□□□□□ -0.28
SCAMP4-208ENST00000489554 CNOT7Q9UIV1 285 aaKnown RBP13.29□□□□□ -0.28
SCAMP4-208ENST00000489554 TMEM88BA6NKF7 163 aa13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 CCT4P50991 539 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 FOXO4P98177 505 aa13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 IFIT5Q13325 482 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 PDE3AQ14432 1141 aa13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 MICALL2Q8IY33 904 aa13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 PANK1Q8TE04 598 aa13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 ZC3H15Q8WU90 426 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 LEMD3Q9Y2U8 911 aa13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 MED23Q9ULK4 1368 aa13.28□□□□□ -0.28
SCAMP4-208ENST00000489554 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-208ENST00000489554 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-208ENST00000489554 PODNQ7Z5L7 613 aa13.27□□□□□ -0.29
SCAMP4-208ENST00000489554 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
SCAMP4-208ENST00000489554 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-208ENST00000489554 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-208ENST00000489554 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.29
SCAMP4-208ENST00000489554 ZNF609O15014 1411 aa13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 CCDC57Q2TAC2 916 aa13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 LMBR1LQ6UX01 489 aa13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 DZIP1LQ8IYY4 767 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 TMEM57Q8N5G2 664 aa13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 KCNQ5Q9NR82 932 aa13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 PGAP2Q9UHJ9 254 aa13.26□□□□□ -0.29
SCAMP4-208ENST00000489554 CNTNAP1P78357 1384 aa13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 ZNF804BA4D1E1 1349 aa13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 UTYO14607 1347 aa13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 CHRNDQ07001 517 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms