RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CASP7P55210 303 aa17.86■□□□□ 0.45
VTI1A-206ENST00000489142 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
VTI1A-206ENST00000489142 BCL2L13Q9BXK5 485 aa17.86■□□□□ 0.45
VTI1A-206ENST00000489142 GGA1Q9UJY5 639 aa17.86■□□□□ 0.45
VTI1A-206ENST00000489142 FMR1Q06787 632 aaKnown RBP eCLIP17.85■□□□□ 0.45
VTI1A-206ENST00000489142 TNIP1Q15025 636 aa17.85■□□□□ 0.45
VTI1A-206ENST00000489142 FAM161AQ3B820 660 aa17.85■□□□□ 0.45
VTI1A-206ENST00000489142 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
VTI1A-206ENST00000489142 CDC5LQ99459 802 aaKnown RBP17.85■□□□□ 0.45
VTI1A-206ENST00000489142 EYA3Q99504 573 aa17.85■□□□□ 0.45
VTI1A-206ENST00000489142 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
VTI1A-206ENST00000489142 RTL9Q8NET4 1388 aa17.84■□□□□ 0.45
VTI1A-206ENST00000489142 PSMD14O00487 310 aa17.84■□□□□ 0.45
VTI1A-206ENST00000489142 BEND3Q5T5X7 828 aa17.84■□□□□ 0.45
VTI1A-206ENST00000489142 SLC4A10Q6U841 1118 aa17.84■□□□□ 0.45
VTI1A-206ENST00000489142 CREBZFQ9NS37 354 aa17.84■□□□□ 0.45
VTI1A-206ENST00000489142 PODXL2Q9NZ53 605 aa17.84■□□□□ 0.45
VTI1A-206ENST00000489142 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
VTI1A-206ENST00000489142 PCNTO95613 3336 aa17.83■□□□□ 0.44
VTI1A-206ENST00000489142 XDHP47989 1333 aa17.83■□□□□ 0.44
VTI1A-206ENST00000489142 ZC3H12CQ9C0D7 883 aaKnown RBP17.83■□□□□ 0.44
VTI1A-206ENST00000489142 A0A1B0GUL6 1792 aa17.82■□□□□ 0.44
VTI1A-206ENST00000489142 E9PSI1 815 aa17.82■□□□□ 0.44
VTI1A-206ENST00000489142 ITGA6P23229 1130 aa17.82■□□□□ 0.44
VTI1A-206ENST00000489142 USP50Q70EL3 339 aaPredicted RBP17.82■□□□□ 0.44
VTI1A-206ENST00000489142 TRPM4Q8TD43 1214 aa17.82■□□□□ 0.44
VTI1A-206ENST00000489142 PLA2G12BQ9BX93 195 aa17.82■□□□□ 0.44
VTI1A-206ENST00000489142 ADARB2Q9NS39 739 aaKnown RBP17.82■□□□□ 0.44
VTI1A-206ENST00000489142 CNOT7Q9UIV1 285 aaKnown RBP17.82■□□□□ 0.44
VTI1A-206ENST00000489142 TRPM7Q96QT4 1865 aa17.82■□□□□ 0.44
VTI1A-206ENST00000489142 PSME4Q14997 1843 aa17.82■□□□□ 0.44
VTI1A-206ENST00000489142 G3V3G9 751 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 TRAF5O00463 557 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 SLFN5Q08AF3 891 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 MICALL2Q8IY33 904 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 JMYQ8N9B5 988 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 BSDC1Q9NW68 430 aaPredicted RBP17.81■□□□□ 0.44
VTI1A-206ENST00000489142 MINPP1Q9UNW1 487 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
VTI1A-206ENST00000489142 TMEM88BA6NKF7 163 aa17.8■□□□□ 0.44
VTI1A-206ENST00000489142 IGHMBP2P38935 993 aaKnown RBP17.8■□□□□ 0.44
VTI1A-206ENST00000489142 FOXO4P98177 505 aa17.8■□□□□ 0.44
VTI1A-206ENST00000489142 EPHA10Q5JZY3 1008 aa17.8■□□□□ 0.44
VTI1A-206ENST00000489142 MRPL50Q8N5N7 158 aaKnown RBP17.8■□□□□ 0.44
VTI1A-206ENST00000489142 CSF1RP07333 972 aa17.79■□□□□ 0.44
VTI1A-206ENST00000489142 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
VTI1A-206ENST00000489142 HIRAP54198 1017 aaPredicted RBP17.79■□□□□ 0.44
VTI1A-206ENST00000489142 SAMD7Q7Z3H4 446 aa17.79■□□□□ 0.44
VTI1A-206ENST00000489142 ZNF646O15015 1829 aaPredicted RBP17.78■□□□□ 0.44
VTI1A-206ENST00000489142 GRM8O00222 908 aa17.78■□□□□ 0.44
VTI1A-206ENST00000489142 EGFRP00533 1210 aa17.78■□□□□ 0.44
VTI1A-206ENST00000489142 SSH1Q8WYL5 1049 aa17.78■□□□□ 0.44
VTI1A-206ENST00000489142 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
VTI1A-206ENST00000489142 C9orf78Q9NZ63 289 aaPredicted RBP17.78■□□□□ 0.44
VTI1A-206ENST00000489142 POLR2AP24928 1970 aaKnown RBP17.77■□□□□ 0.44
VTI1A-206ENST00000489142 ANKRD18BA2A2Z9 1011 aa17.77■□□□□ 0.44
VTI1A-206ENST00000489142 H7C1D1 291 aa17.77■□□□□ 0.44
VTI1A-206ENST00000489142 KLRK1P26718 216 aa17.77■□□□□ 0.44
VTI1A-206ENST00000489142 CCT4P50991 539 aaKnown RBP17.77■□□□□ 0.44
VTI1A-206ENST00000489142 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
VTI1A-206ENST00000489142 RBM26Q5T8P6 1007 aaKnown RBP17.77■□□□□ 0.44
VTI1A-206ENST00000489142 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
VTI1A-206ENST00000489142 GLIS2Q9BZE0 524 aaPredicted RBP17.77■□□□□ 0.44
VTI1A-206ENST00000489142 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
VTI1A-206ENST00000489142 CNTNAP1P78357 1384 aa17.77■□□□□ 0.43
VTI1A-206ENST00000489142 TXNRD3Q86VQ6 643 aa17.76■□□□□ 0.43
VTI1A-206ENST00000489142 ZNF594Q96JF6 807 aaPredicted RBP17.76■□□□□ 0.43
VTI1A-206ENST00000489142 MED23Q9ULK4 1368 aa17.76■□□□□ 0.43
VTI1A-206ENST00000489142 SNAP23O00161 211 aa17.75■□□□□ 0.43
VTI1A-206ENST00000489142 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
VTI1A-206ENST00000489142 CHRNDQ07001 517 aa17.75■□□□□ 0.43
VTI1A-206ENST00000489142 IFIT5Q13325 482 aaKnown RBP17.75■□□□□ 0.43
VTI1A-206ENST00000489142 DLK2Q6UY11 383 aa17.75■□□□□ 0.43
VTI1A-206ENST00000489142 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
VTI1A-206ENST00000489142 DPF2Q92785 391 aa17.75■□□□□ 0.43
VTI1A-206ENST00000489142 FBXW7Q969H0 707 aa17.75■□□□□ 0.43
VTI1A-206ENST00000489142 ABT1Q9ULW3 272 aaKnown RBP17.75■□□□□ 0.43
VTI1A-206ENST00000489142 TAF5LO75529 589 aa17.74■□□□□ 0.43
VTI1A-206ENST00000489142 VIL1P09327 827 aaKnown RBP17.74■□□□□ 0.43
VTI1A-206ENST00000489142 NBPF7P0C2Y1 421 aaPredicted RBP17.74■□□□□ 0.43
VTI1A-206ENST00000489142 MIER1Q8N108 512 aa17.74■□□□□ 0.43
VTI1A-206ENST00000489142 SUCLG2Q96I99 432 aa17.74■□□□□ 0.43
VTI1A-206ENST00000489142 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
VTI1A-206ENST00000489142 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
VTI1A-206ENST00000489142 HSPA1AP0DMV8 641 aaKnown RBP17.73■□□□□ 0.43
VTI1A-206ENST00000489142 HSPA1BP0DMV9 641 aaKnown RBP17.73■□□□□ 0.43
VTI1A-206ENST00000489142 RPS12P25398 132 aaKnown RBP17.73■□□□□ 0.43
VTI1A-206ENST00000489142 VEGFBP49765 207 aa17.73■□□□□ 0.43
VTI1A-206ENST00000489142 CST9Q5W186 159 aa17.73■□□□□ 0.43
VTI1A-206ENST00000489142 RSBN1LQ6PCB5 846 aaPredicted RBP17.73■□□□□ 0.43
VTI1A-206ENST00000489142 TRMT2AQ8IZ69 625 aaKnown RBP17.73■□□□□ 0.43
VTI1A-206ENST00000489142 ZNF408Q9H9D4 720 aa17.73■□□□□ 0.43
VTI1A-206ENST00000489142 SMC4Q9NTJ3 1288 aa17.73■□□□□ 0.43
VTI1A-206ENST00000489142 ASTN2O75129 1339 aaPredicted RBP17.72■□□□□ 0.43
VTI1A-206ENST00000489142 PTPRCP08575 1304 aa17.72■□□□□ 0.43
VTI1A-206ENST00000489142 KCNJ4P48050 445 aa17.72■□□□□ 0.43
VTI1A-206ENST00000489142 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
VTI1A-206ENST00000489142 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms