RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 KLRG2A4D1S0 409 aaPredicted RBP15.59■□□□□ 0.09
NELFE-209ENST00000488426 KIF3CO14782 793 aa15.59■□□□□ 0.09
NELFE-209ENST00000488426 CDC45O75419 566 aa15.59■□□□□ 0.09
NELFE-209ENST00000488426 SEC24BO95487 1268 aa15.59■□□□□ 0.09
NELFE-209ENST00000488426 NMRK2Q9NPI5 230 aa15.59■□□□□ 0.09
NELFE-209ENST00000488426 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
NELFE-209ENST00000488426 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
NELFE-209ENST00000488426 SYNE4Q8N205 404 aa15.59■□□□□ 0.09
NELFE-209ENST00000488426 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
NELFE-209ENST00000488426 C7orf43Q8WVR3 580 aa15.58■□□□□ 0.08
NELFE-209ENST00000488426 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
NELFE-209ENST00000488426 RTL5Q5HYW3 569 aaPredicted RBP15.57■□□□□ 0.08
NELFE-209ENST00000488426 STYK1Q6J9G0 422 aa15.57■□□□□ 0.08
NELFE-209ENST00000488426 CACNA1SQ13698 1873 aa15.57■□□□□ 0.08
NELFE-209ENST00000488426 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
NELFE-209ENST00000488426 SASH1O94885 1247 aa15.57■□□□□ 0.08
NELFE-209ENST00000488426 NTSR2O95665 410 aa15.57■□□□□ 0.08
NELFE-209ENST00000488426 SDSP20132 328 aa15.57■□□□□ 0.08
NELFE-209ENST00000488426 GTF2E1P29083 439 aaPredicted RBP15.57■□□□□ 0.08
NELFE-209ENST00000488426 PARP10Q53GL7 1025 aa15.57■□□□□ 0.08
NELFE-209ENST00000488426 CCDC88AQ3V6T2 1871 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 TNRC6CQ9HCJ0 1690 aaKnown RBP15.56■□□□□ 0.08
NELFE-209ENST00000488426 TBC1D9Q6ZT07 1266 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 CNKSR1Q969H4 720 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 FAM89AQ96GI7 184 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 GPATCH3Q96I76 525 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 SIL1Q9H173 461 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 CHMP3Q9Y3E7 222 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 LAMB2P55268 1798 aa15.56■□□□□ 0.08
NELFE-209ENST00000488426 KLHDC4Q8TBB5 520 aa15.55■□□□□ 0.08
NELFE-209ENST00000488426 TRMT112Q9UI30 125 aaKnown RBP15.55■□□□□ 0.08
NELFE-209ENST00000488426 CSF1RP07333 972 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 IFIT2P09913 472 aaKnown RBP15.54■□□□□ 0.08
NELFE-209ENST00000488426 NPR1P16066 1061 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 LMNB1P20700 586 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 TBC1D32Q96NH3 1257 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 FBXO3Q9UK99 471 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 AK9Q5TCS8 1911 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 PI4K2BQ8TCG2 481 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 DDRGK1Q96HY6 314 aa15.54■□□□□ 0.08
NELFE-209ENST00000488426 IPO9Q96P70 1041 aaKnown RBP15.54■□□□□ 0.08
NELFE-209ENST00000488426 FER1L6Q2WGJ9 1857 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 IRS4O14654 1257 aaPredicted RBP15.53■□□□□ 0.08
NELFE-209ENST00000488426 ERC2O15083 957 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 CIAO1O76071 339 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 MFAP1P55081 439 aaKnown RBP15.53■□□□□ 0.08
NELFE-209ENST00000488426 CCDC57Q2TAC2 916 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 CRY2Q49AN0 593 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 TSHZ3Q63HK5 1081 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 AACSQ86V21 672 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 NYXQ9GZU5 481 aa15.53■□□□□ 0.08
NELFE-209ENST00000488426 PDE8AO60658 829 aa15.52■□□□□ 0.08
NELFE-209ENST00000488426 GLRX3O76003 335 aaKnown RBP15.52■□□□□ 0.08
NELFE-209ENST00000488426 HSP90B1P14625 803 aaKnown RBP15.52■□□□□ 0.08
NELFE-209ENST00000488426 CTSWP56202 376 aa15.52■□□□□ 0.08
NELFE-209ENST00000488426 UTP14AQ9BVJ6 771 aaKnown RBP15.52■□□□□ 0.08
NELFE-209ENST00000488426 RRAGCQ9HB90 399 aa15.52■□□□□ 0.08
NELFE-209ENST00000488426 ECHDC1Q9NTX5 307 aa15.52■□□□□ 0.08
NELFE-209ENST00000488426 SH3TC1Q8TE82 1336 aa15.52■□□□□ 0.08
NELFE-209ENST00000488426 IL15P40933 162 aaPredicted RBP15.52■□□□□ 0.07
NELFE-209ENST00000488426 EAF2Q96CJ1 260 aaPredicted RBP15.52■□□□□ 0.07
NELFE-209ENST00000488426 DDX60Q8IY21 1712 aaKnown RBP15.52■□□□□ 0.07
NELFE-209ENST00000488426 EYA2O00167 538 aa15.51■□□□□ 0.07
NELFE-209ENST00000488426 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
NELFE-209ENST00000488426 GPR108Q9NPR9 543 aa15.51■□□□□ 0.07
NELFE-209ENST00000488426 IFIT5Q13325 482 aaKnown RBP15.5■□□□□ 0.07
NELFE-209ENST00000488426 ATG9AQ7Z3C6 839 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 TTLL11Q8NHH1 800 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 TRIM6-TRIM34B2RNG4 842 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 TFCP2Q12800 502 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 TNNI3KQ59H18 835 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 C22orf23Q9BZE7 217 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 TAOK3Q9H2K8 898 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.5■□□□□ 0.07
NELFE-209ENST00000488426 FPGT-TNNI3KV9GXZ4 949 aa15.5■□□□□ 0.07
NELFE-209ENST00000488426 POTECB2RU33 542 aa15.49■□□□□ 0.07
NELFE-209ENST00000488426 SLC10A5Q5PT55 438 aa15.49■□□□□ 0.07
NELFE-209ENST00000488426 ZNF277Q9NRM2 450 aaPredicted RBP15.49■□□□□ 0.07
NELFE-209ENST00000488426 ALDH1B1P30837 517 aa15.48■□□□□ 0.07
NELFE-209ENST00000488426 HOXA10P31260 410 aaPredicted RBP15.48■□□□□ 0.07
NELFE-209ENST00000488426 TAF7LQ5H9L4 462 aa15.48■□□□□ 0.07
NELFE-209ENST00000488426 CNTROBQ8N137 903 aa15.48■□□□□ 0.07
NELFE-209ENST00000488426 RILPL2Q969X0 211 aa15.48■□□□□ 0.07
NELFE-209ENST00000488426 ANKRD18BA2A2Z9 1011 aa15.48■□□□□ 0.07
NELFE-209ENST00000488426 GLTPD2A6NH11 291 aa15.48■□□□□ 0.07
NELFE-209ENST00000488426 RBM25P49756 843 aaKnown RBP15.48■□□□□ 0.07
NELFE-209ENST00000488426 CCDC8Q9H0W5 538 aaPredicted RBP15.48■□□□□ 0.07
NELFE-209ENST00000488426 RTL9Q8NET4 1388 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 PCNTO95613 3336 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 ZNF609O15014 1411 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 ITGA6P23229 1130 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 RPGRQ92834 1020 aaKnown RBP15.47■□□□□ 0.07
NELFE-209ENST00000488426 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
NELFE-209ENST00000488426 GREM2Q9H772 168 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 LTBP3Q9NS15 1303 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 SNED1Q8TER0 1413 aa15.47■□□□□ 0.07
NELFE-209ENST00000488426 TOMM70O94826 608 aa15.46■□□□□ 0.07
NELFE-209ENST00000488426 REC8O95072 547 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms