RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 COL9A1P20849 921 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 SCARF1Q14162 830 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
APTX-228ENST00000486724 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 UBN2Q6ZU65 1347 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 MUC3AQ02505 3323 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 LAMB4A4D0S4 1761 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 LAMB1P07942 1786 aa11.23□□□□□ -0.61
APTX-228ENST00000486724 WTIPA6NIX2 430 aaPredicted RBP11.22□□□□□ -0.61
APTX-228ENST00000486724 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
APTX-228ENST00000486724 MYCP01106 439 aaPredicted RBP11.22□□□□□ -0.61
APTX-228ENST00000486724 SNRPA1P09661 255 aaKnown RBP11.22□□□□□ -0.61
APTX-228ENST00000486724 PRKCSHP14314 528 aaPredicted RBP11.22□□□□□ -0.61
APTX-228ENST00000486724 NF2P35240 595 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 SP3Q02447 781 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 SPRYD7Q5W111 196 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 RTL9Q8NET4 1388 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 PTCH2Q9Y6C5 1203 aa11.22□□□□□ -0.61
APTX-228ENST00000486724 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
APTX-228ENST00000486724 KCNQ3O43525 872 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 ECE2O60344 883 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 NTSR2O95665 410 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 GPTP24298 496 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 ARHGEF6Q15052 776 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 SUSD4Q5VX71 490 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 Q7L0L9 218 aa11.21□□□□□ -0.61
APTX-228ENST00000486724 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 CEMIPQ8WUJ3 1361 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 MAP3K15Q6ZN16 1313 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
APTX-228ENST00000486724 ZNF280AP59817 542 aaPredicted RBP11.2□□□□□ -0.62
APTX-228ENST00000486724 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
APTX-228ENST00000486724 CRHR2Q13324 411 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 ANKRD36CQ5JPF3 1778 aa11.2□□□□□ -0.62
APTX-228ENST00000486724 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
APTX-228ENST00000486724 LAMB2P55268 1798 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 VIL1P09327 827 aaKnown RBP11.19□□□□□ -0.62
APTX-228ENST00000486724 PLA2G5P39877 138 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 CAP1Q01518 475 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 PRAMEF18Q5VWM3 479 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 KIF6Q6ZMV9 814 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 ARMC9Q7Z3E5 817 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 TMC4Q7Z404 712 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 KCNQ5Q9NR82 932 aa11.19□□□□□ -0.62
APTX-228ENST00000486724 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
APTX-228ENST00000486724 ZBTB48P10074 688 aaPredicted RBP11.18□□□□□ -0.62
APTX-228ENST00000486724 GRAPQ13588 217 aa11.18□□□□□ -0.62
APTX-228ENST00000486724 DDX46Q7L014 1031 aaKnown RBP11.18□□□□□ -0.62
APTX-228ENST00000486724 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
APTX-228ENST00000486724 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
APTX-228ENST00000486724 GRAPLQ8TC17 118 aaPredicted RBP11.18□□□□□ -0.62
APTX-228ENST00000486724 SH3TC2Q8TF17 1288 aa11.18□□□□□ -0.62
APTX-228ENST00000486724 MYOZ2Q9NPC6 264 aa11.18□□□□□ -0.62
APTX-228ENST00000486724 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
APTX-228ENST00000486724 TAF1P21675 1872 aa11.18□□□□□ -0.62
APTX-228ENST00000486724 SCN9AQ15858 1988 aa11.17□□□□□ -0.62
APTX-228ENST00000486724 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
APTX-228ENST00000486724 SLC10A5Q5PT55 438 aa11.17□□□□□ -0.62
APTX-228ENST00000486724 LDLRAD1Q5T700 205 aa11.17□□□□□ -0.62
APTX-228ENST00000486724 UBE2Q1Q7Z7E8 422 aa11.17□□□□□ -0.62
APTX-228ENST00000486724 AGBL3Q8NEM8 1001 aa11.17□□□□□ -0.62
APTX-228ENST00000486724 NKX2-3Q8TAU0 364 aa11.17□□□□□ -0.62
APTX-228ENST00000486724 C6orf229H3BNL8 230 aa11.16□□□□□ -0.62
APTX-228ENST00000486724 PARP10Q53GL7 1025 aa11.16□□□□□ -0.62
APTX-228ENST00000486724 ZNF34Q8IZ26 560 aa11.16□□□□□ -0.62
APTX-228ENST00000486724 FAM122AQ96E09 287 aa11.16□□□□□ -0.62
APTX-228ENST00000486724 EYA3Q99504 573 aa11.16□□□□□ -0.62
APTX-228ENST00000486724 STAP2Q9UGK3 403 aa11.16□□□□□ -0.62
APTX-228ENST00000486724 LAMA2P24043 3122 aaKnown RBP11.15□□□□□ -0.62
APTX-228ENST00000486724 RPTORQ8N122 1335 aa11.15□□□□□ -0.62
APTX-228ENST00000486724 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
APTX-228ENST00000486724 PRKG1Q13976 671 aa11.15□□□□□ -0.62
APTX-228ENST00000486724 RSBN1LQ6PCB5 846 aaPredicted RBP11.15□□□□□ -0.62
APTX-228ENST00000486724 NGEFQ8N5V2 710 aa11.15□□□□□ -0.62
APTX-228ENST00000486724 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
APTX-228ENST00000486724 NSFL1CQ9UNZ2 370 aaKnown RBP11.15□□□□□ -0.62
APTX-228ENST00000486724 PSME4Q14997 1843 aa11.14□□□□□ -0.63
APTX-228ENST00000486724 EVI5O60447 810 aa11.14□□□□□ -0.63
APTX-228ENST00000486724 LRIT3Q3SXY7 679 aa11.14□□□□□ -0.63
APTX-228ENST00000486724 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
APTX-228ENST00000486724 SLC10A4Q96EP9 437 aa11.14□□□□□ -0.63
APTX-228ENST00000486724 WNK4Q96J92 1243 aa11.14□□□□□ -0.63
APTX-228ENST00000486724 UTP14AQ9BVJ6 771 aaKnown RBP11.14□□□□□ -0.63
APTX-228ENST00000486724 ANGEL1Q9UNK9 670 aaKnown RBP11.14□□□□□ -0.63
APTX-228ENST00000486724 TTC28Q96AY4 2481 aa11.13□□□□□ -0.63
APTX-228ENST00000486724 BMP8BP34820 402 aa11.13□□□□□ -0.63
APTX-228ENST00000486724 GJA8P48165 433 aa11.13□□□□□ -0.63
APTX-228ENST00000486724 NBPF9Q3BBW0 867 aa11.13□□□□□ -0.63
APTX-228ENST00000486724 POLLQ9UGP5 575 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms