RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 RTL9Q8NET4 1388 aa22.71■■□□□ 1.23
MCF2L-226ENST00000486210 TNRC18O15417 2968 aaPredicted RBP22.7■■□□□ 1.22
MCF2L-226ENST00000486210 ADM5C9JUS6 153 aa22.7■■□□□ 1.22
MCF2L-226ENST00000486210 RIMBP2O15034 1052 aa22.7■■□□□ 1.22
MCF2L-226ENST00000486210 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
MCF2L-226ENST00000486210 WDR63Q8IWG1 891 aa22.7■■□□□ 1.22
MCF2L-226ENST00000486210 GBA2Q9HCG7 927 aaPredicted RBP22.7■■□□□ 1.22
MCF2L-226ENST00000486210 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.22
MCF2L-226ENST00000486210 NSFL1CQ9UNZ2 370 aaKnown RBP22.7■■□□□ 1.22
MCF2L-226ENST00000486210 AKAP11Q9UKA4 1901 aa22.7■■□□□ 1.22
MCF2L-226ENST00000486210 CHL1O00533 1208 aa22.69■■□□□ 1.22
MCF2L-226ENST00000486210 GPSM2P81274 684 aa22.69■■□□□ 1.22
MCF2L-226ENST00000486210 SF3B3Q15393 1217 aaKnown RBP22.69■■□□□ 1.22
MCF2L-226ENST00000486210 FAM89AQ96GI7 184 aa22.69■■□□□ 1.22
MCF2L-226ENST00000486210 CHPF2Q9P2E5 772 aa22.69■■□□□ 1.22
MCF2L-226ENST00000486210 ECE2O60344 883 aa22.68■■□□□ 1.22
MCF2L-226ENST00000486210 KIF23Q02241 960 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-226ENST00000486210 ISCA1Q9BUE6 129 aa22.68■■□□□ 1.22
MCF2L-226ENST00000486210 CALD1Q05682 793 aaKnown RBP22.67■■□□□ 1.22
MCF2L-226ENST00000486210 DOK7Q18PE1 504 aa22.67■■□□□ 1.22
MCF2L-226ENST00000486210 RBM26Q5T8P6 1007 aaKnown RBP22.67■■□□□ 1.22
MCF2L-226ENST00000486210 IFT57Q9NWB7 429 aa22.67■■□□□ 1.22
MCF2L-226ENST00000486210 SAGE1Q9NXZ1 904 aa22.67■■□□□ 1.22
MCF2L-226ENST00000486210 IL16Q14005 1332 aa22.66■■□□□ 1.22
MCF2L-226ENST00000486210 C6orf229H3BNL8 230 aa22.66■■□□□ 1.22
MCF2L-226ENST00000486210 RPS12P25398 132 aaKnown RBP22.66■■□□□ 1.22
MCF2L-226ENST00000486210 C2orf69Q8N8R5 385 aa22.66■■□□□ 1.22
MCF2L-226ENST00000486210 PLBD2Q8NHP8 589 aa22.66■■□□□ 1.22
MCF2L-226ENST00000486210 YTHDC1Q96MU7 727 aaKnown RBP22.66■■□□□ 1.22
MCF2L-226ENST00000486210 MBIPQ9NS73 344 aa22.66■■□□□ 1.22
MCF2L-226ENST00000486210 ASTN2O75129 1339 aaPredicted RBP22.65■■□□□ 1.22
MCF2L-226ENST00000486210 ATP5J2-PTCD1G3V325 749 aa22.65■■□□□ 1.22
MCF2L-226ENST00000486210 GNAI1P63096 354 aa22.65■■□□□ 1.22
MCF2L-226ENST00000486210 TBC1D16Q8TBP0 767 aa22.65■■□□□ 1.22
MCF2L-226ENST00000486210 CCDC102AQ96A19 550 aa22.65■■□□□ 1.22
MCF2L-226ENST00000486210 DCPSQ96C86 337 aaKnown RBP22.65■■□□□ 1.22
MCF2L-226ENST00000486210 CDCA7LQ96GN5 454 aa22.65■■□□□ 1.22
MCF2L-226ENST00000486210 RNF186Q9NXI6 227 aa22.65■■□□□ 1.22
MCF2L-226ENST00000486210 PSME4Q14997 1843 aa22.65■■□□□ 1.22
MCF2L-226ENST00000486210 ZNF157P51786 506 aaPredicted RBP22.64■■□□□ 1.21
MCF2L-226ENST00000486210 KIF4BQ2VIQ3 1234 aa22.64■■□□□ 1.21
MCF2L-226ENST00000486210 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
MCF2L-226ENST00000486210 ANKRD13DQ6ZTN6 518 aa22.64■■□□□ 1.21
MCF2L-226ENST00000486210 TSR2Q969E8 191 aaKnown RBP22.64■■□□□ 1.21
MCF2L-226ENST00000486210 TRPA1O75762 1119 aa22.63■■□□□ 1.21
MCF2L-226ENST00000486210 SLC10A3P09131 477 aa22.63■■□□□ 1.21
MCF2L-226ENST00000486210 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
MCF2L-226ENST00000486210 EYA3Q99504 573 aa22.63■■□□□ 1.21
MCF2L-226ENST00000486210 GGA3Q9NZ52 723 aa22.63■■□□□ 1.21
MCF2L-226ENST00000486210 ZBED9Q6R2W3 1325 aa22.62■■□□□ 1.21
MCF2L-226ENST00000486210 VIL1P09327 827 aaKnown RBP22.62■■□□□ 1.21
MCF2L-226ENST00000486210 CSRNP1Q96S65 589 aa22.62■■□□□ 1.21
MCF2L-226ENST00000486210 SOX10P56693 466 aa22.61■■□□□ 1.21
MCF2L-226ENST00000486210 HDGFL1Q5TGJ6 251 aa22.61■■□□□ 1.21
MCF2L-226ENST00000486210 IRS4O14654 1257 aaPredicted RBP22.6■■□□□ 1.21
MCF2L-226ENST00000486210 HOXB7P09629 217 aa22.6■■□□□ 1.21
MCF2L-226ENST00000486210 RPS8P62241 208 aaKnown RBP22.6■■□□□ 1.21
MCF2L-226ENST00000486210 SLFN5Q08AF3 891 aa22.6■■□□□ 1.21
MCF2L-226ENST00000486210 CDCA5Q96FF9 252 aa22.6■■□□□ 1.21
MCF2L-226ENST00000486210 PODXL2Q9NZ53 605 aa22.6■■□□□ 1.21
MCF2L-226ENST00000486210 PDE4DIPQ5VU43 2346 aa22.6■■□□□ 1.21
MCF2L-226ENST00000486210 FANCIQ9NVI1 1328 aa22.59■■□□□ 1.21
MCF2L-226ENST00000486210 SULF1Q8IWU6 871 aa22.59■■□□□ 1.21
MCF2L-226ENST00000486210 SEC31BQ9NQW1 1179 aa22.59■■□□□ 1.21
MCF2L-226ENST00000486210 PCDH10Q9P2E7 1040 aa22.59■■□□□ 1.21
MCF2L-226ENST00000486210 DBF4Q9UBU7 674 aaPredicted RBP22.59■■□□□ 1.21
MCF2L-226ENST00000486210 ZNF609O15014 1411 aa22.58■■□□□ 1.21
MCF2L-226ENST00000486210 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.21
MCF2L-226ENST00000486210 RASAL3Q86YV0 1011 aa22.58■■□□□ 1.21
MCF2L-226ENST00000486210 ZC3H12CQ9C0D7 883 aaKnown RBP22.58■■□□□ 1.21
MCF2L-226ENST00000486210 E9PSI1 815 aa22.57■■□□□ 1.2
MCF2L-226ENST00000486210 ZNF280AP59817 542 aaPredicted RBP22.57■■□□□ 1.2
MCF2L-226ENST00000486210 PAPPA2Q9BXP8 1791 aa22.57■■□□□ 1.2
MCF2L-226ENST00000486210 ANGEL2Q5VTE6 544 aaKnown RBP22.56■■□□□ 1.2
MCF2L-226ENST00000486210 TRMT2AQ8IZ69 625 aaKnown RBP22.56■■□□□ 1.2
MCF2L-226ENST00000486210 MYH16Q9H6N6 1097 aa22.56■■□□□ 1.2
MCF2L-226ENST00000486210 ZNF646O15015 1829 aaPredicted RBP22.55■■□□□ 1.2
MCF2L-226ENST00000486210 UFL1O94874 794 aa22.55■■□□□ 1.2
MCF2L-226ENST00000486210 SCARF1Q14162 830 aa22.55■■□□□ 1.2
MCF2L-226ENST00000486210 C8orf58Q8NAV2 365 aa22.55■■□□□ 1.2
MCF2L-226ENST00000486210 HYPKQ9NX55 129 aa22.55■■□□□ 1.2
MCF2L-226ENST00000486210 RSBN1LQ6PCB5 846 aaPredicted RBP22.54■■□□□ 1.2
MCF2L-226ENST00000486210 CTU1Q7Z7A3 348 aaKnown RBP22.54■■□□□ 1.2
MCF2L-226ENST00000486210 TSPYL6Q8N831 410 aa22.54■■□□□ 1.2
MCF2L-226ENST00000486210 ZBTB38Q8NAP3 1195 aaPredicted RBP22.54■■□□□ 1.2
MCF2L-226ENST00000486210 AGBL3Q8NEM8 1001 aa22.54■■□□□ 1.2
MCF2L-226ENST00000486210 GMLQ99445 158 aa22.54■■□□□ 1.2
MCF2L-226ENST00000486210 ELL2O00472 640 aaPredicted RBP22.53■■□□□ 1.2
MCF2L-226ENST00000486210 EXOSC9Q06265 439 aaKnown RBP22.53■■□□□ 1.2
MCF2L-226ENST00000486210 DUSP27Q5VZP5 1158 aa22.53■■□□□ 1.2
MCF2L-226ENST00000486210 ANKIB1Q9P2G1 1089 aa22.53■■□□□ 1.2
MCF2L-226ENST00000486210 GGA1Q9UJY5 639 aa22.53■■□□□ 1.2
MCF2L-226ENST00000486210 SCAF8Q9UPN6 1271 aaKnown RBP22.53■■□□□ 1.2
MCF2L-226ENST00000486210 MOB2Q70IA6 237 aa22.52■■□□□ 1.2
MCF2L-226ENST00000486210 PHAXQ9H814 394 aaKnown RBP22.52■■□□□ 1.2
MCF2L-226ENST00000486210 G3V3G9 751 aa22.51■■□□□ 1.19
MCF2L-226ENST00000486210 DCAF8Q5TAQ9 597 aa22.51■■□□□ 1.19
MCF2L-226ENST00000486210 FKBP1BP68106 108 aa22.5■■□□□ 1.19
MCF2L-226ENST00000486210 RIC3Q7Z5B4 369 aa22.5■■□□□ 1.19
MCF2L-226ENST00000486210 REM2Q8IYK8 340 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms