RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ASTN2O75129 1339 aaPredicted RBP25.23■■□□□ 1.63
CHRD-216ENST00000486066 RIMBP2O15034 1052 aa25.23■■□□□ 1.63
CHRD-216ENST00000486066 LMOD3Q0VAK6 560 aa25.23■■□□□ 1.63
CHRD-216ENST00000486066 ZNF428Q96B54 188 aa25.23■■□□□ 1.63
CHRD-216ENST00000486066 CSRNP1Q96S65 589 aa25.23■■□□□ 1.63
CHRD-216ENST00000486066 ZNF646O15015 1829 aaPredicted RBP25.23■■□□□ 1.63
CHRD-216ENST00000486066 HOXB7P09629 217 aa25.22■■□□□ 1.63
CHRD-216ENST00000486066 KIF4BQ2VIQ3 1234 aa25.22■■□□□ 1.63
CHRD-216ENST00000486066 ANKRD13DQ6ZTN6 518 aa25.22■■□□□ 1.63
CHRD-216ENST00000486066 DCPSQ96C86 337 aaKnown RBP25.22■■□□□ 1.63
CHRD-216ENST00000486066 HTTP42858 3142 aa25.22■■□□□ 1.63
CHRD-216ENST00000486066 PAPPA2Q9BXP8 1791 aa25.21■■□□□ 1.63
CHRD-216ENST00000486066 C6orf229H3BNL8 230 aa25.21■■□□□ 1.63
CHRD-216ENST00000486066 ZNF157P51786 506 aaPredicted RBP25.21■■□□□ 1.63
CHRD-216ENST00000486066 ZNF280AP59817 542 aaPredicted RBP25.21■■□□□ 1.63
CHRD-216ENST00000486066 DOK7Q18PE1 504 aa25.21■■□□□ 1.63
CHRD-216ENST00000486066 GGA3Q9NZ52 723 aa25.21■■□□□ 1.63
CHRD-216ENST00000486066 TRIM35Q9UPQ4 493 aa25.21■■□□□ 1.63
CHRD-216ENST00000486066 TRPA1O75762 1119 aa25.2■■□□□ 1.62
CHRD-216ENST00000486066 EYA3Q99504 573 aa25.2■■□□□ 1.62
CHRD-216ENST00000486066 ATP5J2-PTCD1G3V325 749 aa25.19■■□□□ 1.62
CHRD-216ENST00000486066 RPS8P62241 208 aaKnown RBP25.19■■□□□ 1.62
CHRD-216ENST00000486066 RBM26Q5T8P6 1007 aaKnown RBP25.19■■□□□ 1.62
CHRD-216ENST00000486066 CDCA5Q96FF9 252 aa25.19■■□□□ 1.62
CHRD-216ENST00000486066 GMLQ99445 158 aa25.19■■□□□ 1.62
CHRD-216ENST00000486066 RASAL3Q86YV0 1011 aa25.18■■□□□ 1.62
CHRD-216ENST00000486066 DBF4Q9UBU7 674 aaPredicted RBP25.18■■□□□ 1.62
CHRD-216ENST00000486066 MKI67P46013 3256 aaKnown RBP25.18■■□□□ 1.62
CHRD-216ENST00000486066 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
CHRD-216ENST00000486066 HDGFL1Q5TGJ6 251 aa25.17■■□□□ 1.62
CHRD-216ENST00000486066 SOX10P56693 466 aa25.16■■□□□ 1.62
CHRD-216ENST00000486066 SULF1Q8IWU6 871 aa25.16■■□□□ 1.62
CHRD-216ENST00000486066 CTU1Q7Z7A3 348 aaKnown RBP25.15■■□□□ 1.62
CHRD-216ENST00000486066 REM2Q8IYK8 340 aaPredicted RBP25.15■■□□□ 1.62
CHRD-216ENST00000486066 AGBL3Q8NEM8 1001 aa25.15■■□□□ 1.62
CHRD-216ENST00000486066 SEC31BQ9NQW1 1179 aa25.15■■□□□ 1.62
CHRD-216ENST00000486066 FKBP1BP68106 108 aa25.14■■□□□ 1.62
CHRD-216ENST00000486066 RSBN1LQ6PCB5 846 aaPredicted RBP25.14■■□□□ 1.62
CHRD-216ENST00000486066 ZC3H12CQ9C0D7 883 aaKnown RBP25.14■■□□□ 1.62
CHRD-216ENST00000486066 HYPKQ9NX55 129 aa25.14■■□□□ 1.62
CHRD-216ENST00000486066 PITPNM2Q9BZ72 1349 aa25.13■■□□□ 1.61
CHRD-216ENST00000486066 RTL5Q5HYW3 569 aaPredicted RBP25.13■■□□□ 1.61
CHRD-216ENST00000486066 ANGEL2Q5VTE6 544 aaKnown RBP25.13■■□□□ 1.61
CHRD-216ENST00000486066 ZBTB38Q8NAP3 1195 aaPredicted RBP25.13■■□□□ 1.61
CHRD-216ENST00000486066 CENPFP49454 3210 aa25.12■■□□□ 1.61
CHRD-216ENST00000486066 SCARF1Q14162 830 aa25.12■■□□□ 1.61
CHRD-216ENST00000486066 UFL1O94874 794 aa25.11■■□□□ 1.61
CHRD-216ENST00000486066 RALBP1Q15311 655 aa25.1■■□□□ 1.61
CHRD-216ENST00000486066 GGA1Q9UJY5 639 aa25.1■■□□□ 1.61
CHRD-216ENST00000486066 BRCA2P51587 3418 aa25.09■■□□□ 1.61
CHRD-216ENST00000486066 CCDC146Q8IYE0 955 aa25.09■■□□□ 1.61
CHRD-216ENST00000486066 NEUROD2Q15784 382 aa25.08■■□□□ 1.61
CHRD-216ENST00000486066 DUSP27Q5VZP5 1158 aa25.08■■□□□ 1.61
CHRD-216ENST00000486066 MYOZ2Q9NPC6 264 aa25.08■■□□□ 1.61
CHRD-216ENST00000486066 HPS5Q9UPZ3 1129 aa25.08■■□□□ 1.61
CHRD-216ENST00000486066 ZNF853P0CG23 659 aa25.07■■□□□ 1.6
CHRD-216ENST00000486066 NOM1Q5C9Z4 860 aaKnown RBP25.07■■□□□ 1.6
CHRD-216ENST00000486066 PRPF38BQ5VTL8 546 aaKnown RBP25.07■■□□□ 1.6
CHRD-216ENST00000486066 PCCAP05165 728 aaPredicted RBP25.06■■□□□ 1.6
CHRD-216ENST00000486066 USP17L8P0C7I0 530 aa25.06■■□□□ 1.6
CHRD-216ENST00000486066 MOB2Q70IA6 237 aa25.06■■□□□ 1.6
CHRD-216ENST00000486066 RUNDC1Q96C34 613 aa25.06■■□□□ 1.6
CHRD-216ENST00000486066 ANKIB1Q9P2G1 1089 aa25.06■■□□□ 1.6
CHRD-216ENST00000486066 LAS1LQ9Y4W2 734 aaKnown RBP25.06■■□□□ 1.6
CHRD-216ENST00000486066 XDHP47989 1333 aa25.06■■□□□ 1.6
CHRD-216ENST00000486066 MYH3P11055 1940 aa25.06■■□□□ 1.6
CHRD-216ENST00000486066 PODNQ7Z5L7 613 aa25.05■■□□□ 1.6
CHRD-216ENST00000486066 CCDC191Q8NCU4 936 aa25.05■■□□□ 1.6
CHRD-216ENST00000486066 PHAXQ9H814 394 aaKnown RBP25.05■■□□□ 1.6
CHRD-216ENST00000486066 MBIPQ9NS73 344 aa25.05■■□□□ 1.6
CHRD-216ENST00000486066 LAMB1P07942 1786 aa25.05■■□□□ 1.6
CHRD-216ENST00000486066 PDE8AO60658 829 aa25.04■■□□□ 1.6
CHRD-216ENST00000486066 TM4SF4P48230 202 aa25.04■■□□□ 1.6
CHRD-216ENST00000486066 PKN2Q16513 984 aaKnown RBP25.04■■□□□ 1.6
CHRD-216ENST00000486066 CCDC152Q4G0S7 254 aa25.04■■□□□ 1.6
CHRD-216ENST00000486066 ZNF296Q8WUU4 475 aaPredicted RBP25.04■■□□□ 1.6
CHRD-216ENST00000486066 SPEF2Q9C093 1822 aa25.03■■□□□ 1.6
CHRD-216ENST00000486066 WTIPA6NIX2 430 aaPredicted RBP25.03■■□□□ 1.6
CHRD-216ENST00000486066 HSP90B1P14625 803 aaKnown RBP25.03■■□□□ 1.6
CHRD-216ENST00000486066 CFHR5Q9BXR6 569 aa25.03■■□□□ 1.6
CHRD-216ENST00000486066 USP17L3A6NCW0 530 aa25.02■■□□□ 1.6
CHRD-216ENST00000486066 USP17L4A6NCW7 530 aa25.02■■□□□ 1.6
CHRD-216ENST00000486066 NBPF9Q3BBW0 867 aa25.02■■□□□ 1.6
CHRD-216ENST00000486066 USP17L1Q7RTZ2 530 aa25.02■■□□□ 1.6
CHRD-216ENST00000486066 RIC3Q7Z5B4 369 aa25.02■■□□□ 1.6
CHRD-216ENST00000486066 SCAF8Q9UPN6 1271 aaKnown RBP25.02■■□□□ 1.6
CHRD-216ENST00000486066 MED23Q9ULK4 1368 aa25.02■■□□□ 1.6
CHRD-216ENST00000486066 UBE2Q2LH0YL09 131 aa25.01■■□□□ 1.59
CHRD-216ENST00000486066 DACT2Q5SW24 774 aa25.01■■□□□ 1.59
CHRD-216ENST00000486066 MYD88Q99836 296 aa25.01■■□□□ 1.59
CHRD-216ENST00000486066 ATP2B4P23634 1241 aa25■■□□□ 1.59
CHRD-216ENST00000486066 GOLGA2Q08379 1002 aa25■■□□□ 1.59
CHRD-216ENST00000486066 MYBBP1AQ9BQG0 1328 aaKnown RBP25■■□□□ 1.59
CHRD-216ENST00000486066 G3V3G9 751 aa24.99■■□□□ 1.59
CHRD-216ENST00000486066 WNT10BO00744 389 aa24.99■■□□□ 1.59
CHRD-216ENST00000486066 TBC1D8O95759 1140 aa24.99■■□□□ 1.59
CHRD-216ENST00000486066 DCAF8Q5TAQ9 597 aa24.99■■□□□ 1.59
CHRD-216ENST00000486066 PRAMEF18Q5VWM3 479 aa24.99■■□□□ 1.59
CHRD-216ENST00000486066 ANKRD18AQ8IVF6 992 aa24.98■■□□□ 1.59
CHRD-216ENST00000486066 JARID2Q92833 1246 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms