RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ITGA6P23229 1130 aa15.57■□□□□ 0.08
MSH5-216ENST00000484309 LMOD1P29536 600 aaPredicted RBP15.57■□□□□ 0.08
MSH5-216ENST00000484309 SCNN1DP51172 638 aa15.57■□□□□ 0.08
MSH5-216ENST00000484309 APLP1P51693 650 aa15.57■□□□□ 0.08
MSH5-216ENST00000484309 HNRNPUQ00839 825 aaKnown RBP eCLIP15.57■□□□□ 0.08
MSH5-216ENST00000484309 DOK7Q18PE1 504 aa15.57■□□□□ 0.08
MSH5-216ENST00000484309 C9orf78Q9NZ63 289 aaPredicted RBP15.57■□□□□ 0.08
MSH5-216ENST00000484309 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
MSH5-216ENST00000484309 WTIPA6NIX2 430 aaPredicted RBP15.56■□□□□ 0.08
MSH5-216ENST00000484309 GRM8O00222 908 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 ALDH1L1O75891 902 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 EPS15P42566 896 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 CIAPIN1Q6FI81 312 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 EYA3Q99504 573 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 GGA1Q9UJY5 639 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 XDHP47989 1333 aa15.56■□□□□ 0.08
MSH5-216ENST00000484309 ZNF646O15015 1829 aaPredicted RBP15.55■□□□□ 0.08
MSH5-216ENST00000484309 PTPRCP08575 1304 aa15.55■□□□□ 0.08
MSH5-216ENST00000484309 ECE2O60344 883 aa15.55■□□□□ 0.08
MSH5-216ENST00000484309 CSF1RP07333 972 aa15.55■□□□□ 0.08
MSH5-216ENST00000484309 IGHMBP2P38935 993 aaKnown RBP15.55■□□□□ 0.08
MSH5-216ENST00000484309 GMPSP49915 693 aaPredicted RBP15.55■□□□□ 0.08
MSH5-216ENST00000484309 FOXO4P98177 505 aa15.55■□□□□ 0.08
MSH5-216ENST00000484309 ALDH1L2Q3SY69 923 aa15.55■□□□□ 0.08
MSH5-216ENST00000484309 MINPP1Q9UNW1 487 aa15.55■□□□□ 0.08
MSH5-216ENST00000484309 POLR2AP24928 1970 aaKnown RBP15.55■□□□□ 0.08
MSH5-216ENST00000484309 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
MSH5-216ENST00000484309 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
MSH5-216ENST00000484309 ZC3H12CQ9C0D7 883 aaKnown RBP15.54■□□□□ 0.08
MSH5-216ENST00000484309 KCNQ5Q9NR82 932 aa15.54■□□□□ 0.08
MSH5-216ENST00000484309 BSDC1Q9NW68 430 aaPredicted RBP15.54■□□□□ 0.08
MSH5-216ENST00000484309 TRPM7Q96QT4 1865 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 SHTN1A0MZ66 631 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 ANKRD18BA2A2Z9 1011 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 G3V3G9 751 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 NBPF7P0C2Y1 421 aaPredicted RBP15.53■□□□□ 0.08
MSH5-216ENST00000484309 TNIP1Q15025 636 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 DCAF8Q5TAQ9 597 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 SUCLG2Q96I99 432 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 MPHOSPH8Q99549 860 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 GPRC5DQ9NZD1 345 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
MSH5-216ENST00000484309 CEP350Q5VT06 3117 aa15.53■□□□□ 0.08
MSH5-216ENST00000484309 PSMD14O00487 310 aa15.52■□□□□ 0.08
MSH5-216ENST00000484309 ATP2B4P23634 1241 aa15.52■□□□□ 0.08
MSH5-216ENST00000484309 IFIT5Q13325 482 aaKnown RBP15.52■□□□□ 0.08
MSH5-216ENST00000484309 MAP1SQ66K74 1059 aaPredicted RBP15.52■□□□□ 0.08
MSH5-216ENST00000484309 PNMA8AQ86V59 439 aaPredicted RBP15.52■□□□□ 0.08
MSH5-216ENST00000484309 ZNF594Q96JF6 807 aaPredicted RBP15.52■□□□□ 0.08
MSH5-216ENST00000484309 CT47B1P0C2W7 299 aaPredicted RBP15.51■□□□□ 0.07
MSH5-216ENST00000484309 CCT4P50991 539 aaKnown RBP15.51■□□□□ 0.07
MSH5-216ENST00000484309 KAZALD1Q96I82 304 aa15.51■□□□□ 0.07
MSH5-216ENST00000484309 NOB1Q9ULX3 412 aaKnown RBP15.51■□□□□ 0.07
MSH5-216ENST00000484309 KLRK1P26718 216 aa15.5■□□□□ 0.07
MSH5-216ENST00000484309 CHRNDQ07001 517 aa15.5■□□□□ 0.07
MSH5-216ENST00000484309 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
MSH5-216ENST00000484309 HELBQ8NG08 1087 aaPredicted RBP15.5■□□□□ 0.07
MSH5-216ENST00000484309 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
MSH5-216ENST00000484309 SNAP23O00161 211 aa15.49■□□□□ 0.07
MSH5-216ENST00000484309 TAF5LO75529 589 aa15.49■□□□□ 0.07
MSH5-216ENST00000484309 RARSP54136 660 aaKnown RBP15.49■□□□□ 0.07
MSH5-216ENST00000484309 CCDC57Q2TAC2 916 aa15.49■□□□□ 0.07
MSH5-216ENST00000484309 BICC1Q9H694 974 aaKnown RBP15.49■□□□□ 0.07
MSH5-216ENST00000484309 ADARB2Q9NS39 739 aaKnown RBP15.49■□□□□ 0.07
MSH5-216ENST00000484309 CNOT7Q9UIV1 285 aaKnown RBP15.49■□□□□ 0.07
MSH5-216ENST00000484309 ZNF804BA4D1E1 1349 aa15.48■□□□□ 0.07
MSH5-216ENST00000484309 UTYO14607 1347 aa15.48■□□□□ 0.07
MSH5-216ENST00000484309 ITGBL1O95965 494 aaPredicted RBP15.48■□□□□ 0.07
MSH5-216ENST00000484309 KCNJ4P48050 445 aa15.48■□□□□ 0.07
MSH5-216ENST00000484309 USP50Q70EL3 339 aaPredicted RBP15.48■□□□□ 0.07
MSH5-216ENST00000484309 TXNRD3Q86VQ6 643 aa15.48■□□□□ 0.07
MSH5-216ENST00000484309 MICALL2Q8IY33 904 aa15.48■□□□□ 0.07
MSH5-216ENST00000484309 TRPM4Q8TD43 1214 aa15.48■□□□□ 0.07
MSH5-216ENST00000484309 ANKRD2Q9GZV1 360 aa15.48■□□□□ 0.07
MSH5-216ENST00000484309 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 PLIN1O60240 522 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 FMR1Q06787 632 aaKnown RBP eCLIP15.47■□□□□ 0.07
MSH5-216ENST00000484309 CNTROBQ8N137 903 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 DNAJC5GQ8N7S2 189 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 ANKRD44Q8N8A2 993 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 USP44Q9H0E7 712 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 CNNM1Q9NRU3 951 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 LEMD3Q9Y2U8 911 aa15.47■□□□□ 0.07
MSH5-216ENST00000484309 HIRAP54198 1017 aaPredicted RBP15.46■□□□□ 0.07
MSH5-216ENST00000484309 LDHAL6AQ6ZMR3 332 aa15.46■□□□□ 0.07
MSH5-216ENST00000484309 SAMD7Q7Z3H4 446 aa15.46■□□□□ 0.07
MSH5-216ENST00000484309 PUS3Q9BZE2 481 aaKnown RBP15.46■□□□□ 0.07
MSH5-216ENST00000484309 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.07
MSH5-216ENST00000484309 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
MSH5-216ENST00000484309 H7C1D1 291 aa15.45■□□□□ 0.06
MSH5-216ENST00000484309 BCAR3O75815 825 aa15.45■□□□□ 0.06
MSH5-216ENST00000484309 EGFRP00533 1210 aa15.45■□□□□ 0.06
MSH5-216ENST00000484309 TBC1D10BQ4KMP7 808 aaPredicted RBP15.45■□□□□ 0.06
MSH5-216ENST00000484309 RBM26Q5T8P6 1007 aaKnown RBP15.45■□□□□ 0.06
MSH5-216ENST00000484309 KLRG1Q96E93 195 aa15.45■□□□□ 0.06
MSH5-216ENST00000484309 MXD3Q9BW11 206 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms